RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 MSANTD2Q6P1R3 559 aa19.82■□□□□ 0.76
CKS1B-203ENST00000368439 TPGS1Q6ZTW0 290 aa19.82■□□□□ 0.76
CKS1B-203ENST00000368439 FMNL3Q8IVF7 1028 aa19.82■□□□□ 0.76
CKS1B-203ENST00000368439 FAM217AQ8IXS0 508 aa19.82■□□□□ 0.76
CKS1B-203ENST00000368439 CAMKK1Q8N5S9 505 aa19.82■□□□□ 0.76
CKS1B-203ENST00000368439 ACDQ96AP0 544 aa19.82■□□□□ 0.76
CKS1B-203ENST00000368439 BBS2Q9BXC9 721 aa19.82■□□□□ 0.76
CKS1B-203ENST00000368439 SLC4A5Q9BY07 1137 aa19.82■□□□□ 0.76
CKS1B-203ENST00000368439 DCLK3Q9C098 648 aa19.82■□□□□ 0.76
CKS1B-203ENST00000368439 WDR35Q9P2L0 1181 aa19.82■□□□□ 0.76
CKS1B-203ENST00000368439 HCN2Q9UL51 889 aa19.82■□□□□ 0.76
CKS1B-203ENST00000368439 STRIP2Q9ULQ0 834 aa19.82■□□□□ 0.76
CKS1B-203ENST00000368439 SMG5Q9UPR3 1016 aaKnown RBP19.82■□□□□ 0.76
CKS1B-203ENST00000368439 NEDD8-MDP1E9PL57 170 aa19.81■□□□□ 0.76
CKS1B-203ENST00000368439 FOXN3O00409 490 aaPredicted RBP19.81■□□□□ 0.76
CKS1B-203ENST00000368439 THAP12O43422 761 aa19.81■□□□□ 0.76
CKS1B-203ENST00000368439 MED7O43513 233 aa19.81■□□□□ 0.76
CKS1B-203ENST00000368439 FBXO21O94952 628 aa19.81■□□□□ 0.76
CKS1B-203ENST00000368439 PENKP01210 267 aaPredicted RBP19.81■□□□□ 0.76
CKS1B-203ENST00000368439 CISD3P0C7P0 127 aa19.81■□□□□ 0.76
CKS1B-203ENST00000368439 CNR2P34972 360 aa19.81■□□□□ 0.76
CKS1B-203ENST00000368439 CLCN1P35523 988 aa19.81■□□□□ 0.76
CKS1B-203ENST00000368439 PXNP49023 591 aaPredicted RBP19.81■□□□□ 0.76
CKS1B-203ENST00000368439 DENND1CQ8IV53 801 aa19.81■□□□□ 0.76
CKS1B-203ENST00000368439 WDTC1Q8N5D0 677 aa19.81■□□□□ 0.76
CKS1B-203ENST00000368439 TERB1Q8NA31 727 aa19.81■□□□□ 0.76
CKS1B-203ENST00000368439 PLD4Q96BZ4 506 aa19.81■□□□□ 0.76
CKS1B-203ENST00000368439 DEC1Q9P2X7 70 aa19.81■□□□□ 0.76
CKS1B-203ENST00000368439 FBXO10Q9UK96 956 aa19.81■□□□□ 0.76
CKS1B-203ENST00000368439 MMP17Q9ULZ9 603 aa19.81■□□□□ 0.76
CKS1B-203ENST00000368439 HBS1LQ9Y450 684 aaKnown RBP19.81■□□□□ 0.76
CKS1B-203ENST00000368439 SPAG17Q6Q759 2223 aa19.81■□□□□ 0.76
CKS1B-203ENST00000368439 LTFP02788 710 aa19.8■□□□□ 0.76
CKS1B-203ENST00000368439 PNMA6AP0CW24 399 aaPredicted RBP19.8■□□□□ 0.76
CKS1B-203ENST00000368439 HNRNPLP14866 589 aaKnown RBP eCLIP19.8■□□□□ 0.76
CKS1B-203ENST00000368439 USP8P40818 1118 aa19.8■□□□□ 0.76
CKS1B-203ENST00000368439 CCDC183Q5T5S1 534 aa19.8■□□□□ 0.76
CKS1B-203ENST00000368439 KLHDC7AQ5VTJ3 777 aa19.8■□□□□ 0.76
CKS1B-203ENST00000368439 FYB2Q5VWT5 728 aa19.8■□□□□ 0.76
CKS1B-203ENST00000368439 TMEM110Q86TL2 294 aa19.8■□□□□ 0.76
CKS1B-203ENST00000368439 SCUBE3Q8IX30 993 aa19.8■□□□□ 0.76
CKS1B-203ENST00000368439 FAM71AQ8IYT1 594 aa19.8■□□□□ 0.76
CKS1B-203ENST00000368439 CPXM2Q8N436 756 aa19.8■□□□□ 0.76
CKS1B-203ENST00000368439 DCLK2Q8N568 766 aa19.8■□□□□ 0.76
CKS1B-203ENST00000368439 IL17RCQ8NAC3 791 aa19.8■□□□□ 0.76
CKS1B-203ENST00000368439 RNF139Q8WU17 664 aa19.8■□□□□ 0.76
CKS1B-203ENST00000368439 RUBCNQ92622 972 aa19.8■□□□□ 0.76
CKS1B-203ENST00000368439 HHIPQ96QV1 700 aa19.8■□□□□ 0.76
CKS1B-203ENST00000368439 NAA15Q9BXJ9 866 aaKnown RBP19.8■□□□□ 0.76
CKS1B-203ENST00000368439 MIS12Q9H081 205 aa19.8■□□□□ 0.76
CKS1B-203ENST00000368439 FANCLQ9NW38 375 aa19.8■□□□□ 0.76
CKS1B-203ENST00000368439 TAB2Q9NYJ8 693 aa19.8■□□□□ 0.76
CKS1B-203ENST00000368439 TMEM63CQ9P1W3 806 aa19.8■□□□□ 0.76
CKS1B-203ENST00000368439 PCDHGC3Q9UN70 934 aa19.8■□□□□ 0.76
CKS1B-203ENST00000368439 GFRA2O00451 464 aa19.79■□□□□ 0.76
CKS1B-203ENST00000368439 PAPSS1O43252 624 aaPredicted RBP19.79■□□□□ 0.76
CKS1B-203ENST00000368439 MSI1O43347 362 aaKnown RBP19.79■□□□□ 0.76
CKS1B-203ENST00000368439 IGLV3-27P01718 113 aa19.79■□□□□ 0.76
CKS1B-203ENST00000368439 CHKAP35790 457 aa19.79■□□□□ 0.76
CKS1B-203ENST00000368439 ACADSBP45954 432 aa19.79■□□□□ 0.76
CKS1B-203ENST00000368439 KRT31Q15323 416 aa19.79■□□□□ 0.76
CKS1B-203ENST00000368439 SASS6Q6UVJ0 657 aa19.79■□□□□ 0.76
CKS1B-203ENST00000368439 CCDC33Q8N5R6 958 aa19.79■□□□□ 0.76
CKS1B-203ENST00000368439 ALLCQ8N6M5 410 aa19.79■□□□□ 0.76
CKS1B-203ENST00000368439 XPO6Q96QU8 1125 aaKnown RBP19.79■□□□□ 0.76
CKS1B-203ENST00000368439 DNAJC17Q9NVM6 304 aaKnown RBP19.79■□□□□ 0.76
CKS1B-203ENST00000368439 ANO10Q9NW15 660 aa19.79■□□□□ 0.76
CKS1B-203ENST00000368439 PLK2Q9NYY3 685 aa19.79■□□□□ 0.76
CKS1B-203ENST00000368439 TJP2Q9UDY2 1190 aa19.79■□□□□ 0.76
CKS1B-203ENST00000368439 EBF1Q9UH73 591 aa19.79■□□□□ 0.76
CKS1B-203ENST00000368439 STOML2Q9UJZ1 356 aa19.79■□□□□ 0.76
CKS1B-203ENST00000368439 STARD13Q9Y3M8 1113 aa19.79■□□□□ 0.76
CKS1B-203ENST00000368439 FHOD1Q9Y613 1164 aa19.79■□□□□ 0.76
CKS1B-203ENST00000368439 TBC1D3BA6NDS4 549 aa19.78■□□□□ 0.76
CKS1B-203ENST00000368439 E5RJQ4 531 aa19.78■□□□□ 0.76
CKS1B-203ENST00000368439 SGK1O00141 431 aa19.78■□□□□ 0.76
CKS1B-203ENST00000368439 ADAM23O75077 832 aa19.78■□□□□ 0.76
CKS1B-203ENST00000368439 TIE1P35590 1138 aa19.78■□□□□ 0.76
CKS1B-203ENST00000368439 CRY1Q16526 586 aa19.78■□□□□ 0.76
CKS1B-203ENST00000368439 STX1AQ16623 288 aa19.78■□□□□ 0.76
CKS1B-203ENST00000368439 HSF5Q4G112 596 aaPredicted RBP19.78■□□□□ 0.76
CKS1B-203ENST00000368439 GRAMD4Q6IC98 578 aa19.78■□□□□ 0.76
CKS1B-203ENST00000368439 TMEM92Q6UXU6 159 aa19.78■□□□□ 0.76
CKS1B-203ENST00000368439 TOGARAM2Q6ZUX3 1019 aa19.78■□□□□ 0.76
CKS1B-203ENST00000368439 SLC47A2Q86VL8 602 aa19.78■□□□□ 0.76
CKS1B-203ENST00000368439 TXNDC5Q8NBS9 432 aaKnown RBP19.78■□□□□ 0.76
CKS1B-203ENST00000368439 ZDHHC4Q9NPG8 344 aa19.78■□□□□ 0.76
CKS1B-203ENST00000368439 ST7Q9NRC1 585 aa19.78■□□□□ 0.76
CKS1B-203ENST00000368439 PRRT4C9JH25 899 aa19.77■□□□□ 0.76
CKS1B-203ENST00000368439 KLF8O95600 359 aaPredicted RBP19.77■□□□□ 0.76
CKS1B-203ENST00000368439 APBB3O95704 486 aa19.77■□□□□ 0.76
CKS1B-203ENST00000368439 PTK2Q05397 1052 aa19.77■□□□□ 0.76
CKS1B-203ENST00000368439 PDCLQ13371 301 aa19.77■□□□□ 0.76
CKS1B-203ENST00000368439 SIM2Q14190 667 aaPredicted RBP19.77■□□□□ 0.76
CKS1B-203ENST00000368439 DRAP1Q14919 205 aaPredicted RBP19.77■□□□□ 0.76
CKS1B-203ENST00000368439 NCAPHQ15003 741 aa19.77■□□□□ 0.76
CKS1B-203ENST00000368439 PREPLQ4J6C6 727 aaPredicted RBP19.77■□□□□ 0.76
CKS1B-203ENST00000368439 C10orf76Q5T2E6 689 aa19.77■□□□□ 0.76
CKS1B-203ENST00000368439 BEND5Q7L4P6 421 aa19.77■□□□□ 0.76
CKS1B-203ENST00000368439 RASSF3Q86WH2 238 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms