RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 KIF28PB7ZC32 967 aa8.65□□□□□ -1.02
YBX3-204ENST00000366290 NPIPB6E9PJ23 425 aa8.65□□□□□ -1.02
YBX3-204ENST00000366290 FGBP02675 491 aa8.65□□□□□ -1.02
YBX3-204ENST00000366290 CYP1A1P04798 512 aaPredicted RBP8.65□□□□□ -1.02
YBX3-204ENST00000366290 ARP10275 920 aa8.65□□□□□ -1.02
YBX3-204ENST00000366290 CKBP12277 381 aa8.65□□□□□ -1.02
YBX3-204ENST00000366290 TCF7P36402 384 aaPredicted RBP8.65□□□□□ -1.02
YBX3-204ENST00000366290 SLC26A2P50443 739 aa8.65□□□□□ -1.02
YBX3-204ENST00000366290 SETQ01105 290 aaPredicted RBP8.65□□□□□ -1.02
YBX3-204ENST00000366290 MAN2A1Q16706 1144 aa8.65□□□□□ -1.02
YBX3-204ENST00000366290 KRTAP19-4Q3LI73 84 aa8.65□□□□□ -1.02
YBX3-204ENST00000366290 TRIM68Q6AZZ1 485 aa8.65□□□□□ -1.02
YBX3-204ENST00000366290 LCNL1Q6ZST4 164 aa8.65□□□□□ -1.02
YBX3-204ENST00000366290 PLPPR4Q7Z2D5 763 aa8.65□□□□□ -1.02
YBX3-204ENST00000366290 C14orf80Q86SX3 495 aa8.65□□□□□ -1.02
YBX3-204ENST00000366290 REXO1L1PQ8IX06 675 aa8.65□□□□□ -1.02
YBX3-204ENST00000366290 MIER2Q8N344 545 aa8.65□□□□□ -1.02
YBX3-204ENST00000366290 FAM184AQ8NB25 1140 aa8.65□□□□□ -1.02
YBX3-204ENST00000366290 GLB1L3Q8NCI6 653 aaPredicted RBP8.65□□□□□ -1.02
YBX3-204ENST00000366290 PCYT2Q99447 389 aa8.65□□□□□ -1.02
YBX3-204ENST00000366290 SDF4Q9BRK5 362 aa8.65□□□□□ -1.02
YBX3-204ENST00000366290 MTIF3Q9H2K0 278 aaKnown RBP8.65□□□□□ -1.02
YBX3-204ENST00000366290 SMARCAD1Q9H4L7 1026 aa8.65□□□□□ -1.02
YBX3-204ENST00000366290 ERAP1Q9NZ08 941 aa8.65□□□□□ -1.02
YBX3-204ENST00000366290 SLC9A2Q9UBY0 812 aa8.65□□□□□ -1.02
YBX3-204ENST00000366290 VWA7Q9Y334 891 aa8.65□□□□□ -1.02
YBX3-204ENST00000366290 TCHHQ07283 1943 aa8.64□□□□□ -1.03
YBX3-204ENST00000366290 PTPRSQ13332 1948 aa8.64□□□□□ -1.03
YBX3-204ENST00000366290 CYP3A7-CYP3A51PA0A087WV96 503 aa8.64□□□□□ -1.03
YBX3-204ENST00000366290 C17orf102A2RUQ5 167 aa8.64□□□□□ -1.03
YBX3-204ENST00000366290 MBLAC1A4D2B0 266 aaPredicted RBP8.64□□□□□ -1.03
YBX3-204ENST00000366290 IPO5O00410 1097 aaKnown RBP8.64□□□□□ -1.03
YBX3-204ENST00000366290 BAIAP3O94812 1187 aa8.64□□□□□ -1.03
YBX3-204ENST00000366290 CCNE2O96020 404 aa8.64□□□□□ -1.03
YBX3-204ENST00000366290 HNRNPLP14866 589 aaKnown RBP eCLIP8.64□□□□□ -1.03
YBX3-204ENST00000366290 FOSL2P15408 326 aa8.64□□□□□ -1.03
YBX3-204ENST00000366290 XBP1P17861 261 aa8.64□□□□□ -1.03
YBX3-204ENST00000366290 SYT1P21579 422 aa8.64□□□□□ -1.03
YBX3-204ENST00000366290 CYP3A7P24462 503 aa8.64□□□□□ -1.03
YBX3-204ENST00000366290 KRT2P35908 639 aa8.64□□□□□ -1.03
YBX3-204ENST00000366290 SLC16A1P53985 500 aa8.64□□□□□ -1.03
YBX3-204ENST00000366290 ACTR2P61160 394 aa8.64□□□□□ -1.03
YBX3-204ENST00000366290 CD69Q07108 199 aa8.64□□□□□ -1.03
YBX3-204ENST00000366290 KLHDC10Q6PID8 442 aa8.64□□□□□ -1.03
YBX3-204ENST00000366290 MOXD1Q6UVY6 613 aa8.64□□□□□ -1.03
YBX3-204ENST00000366290 ABHD15Q6UXT9 468 aa8.64□□□□□ -1.03
YBX3-204ENST00000366290 LARP4Q71RC2 724 aaKnown RBP eCLIP8.64□□□□□ -1.03
YBX3-204ENST00000366290 LRRC8DQ7L1W4 858 aa8.64□□□□□ -1.03
YBX3-204ENST00000366290 PLA2G4DQ86XP0 818 aa8.64□□□□□ -1.03
YBX3-204ENST00000366290 DIS3L2Q8IYB7 885 aaKnown RBP8.64□□□□□ -1.03
YBX3-204ENST00000366290 TXNDC5Q8NBS9 432 aaKnown RBP8.64□□□□□ -1.03
YBX3-204ENST00000366290 ATP6V0A1Q93050 837 aa8.64□□□□□ -1.03
YBX3-204ENST00000366290 AJUBAQ96IF1 538 aa8.64□□□□□ -1.03
YBX3-204ENST00000366290 MBOAT7Q96N66 472 aa8.64□□□□□ -1.03
YBX3-204ENST00000366290 TBC1D22BQ9NU19 505 aa8.64□□□□□ -1.03
YBX3-204ENST00000366290 SCOCQ9UIL1 159 aa8.64□□□□□ -1.03
YBX3-204ENST00000366290 MICAL3Q7RTP6 2002 aa8.64□□□□□ -1.03
YBX3-204ENST00000366290 MYH15Q9Y2K3 1946 aa8.64□□□□□ -1.03
YBX3-204ENST00000366290 RRN3P2A6NIE6 340 aa8.63□□□□□ -1.03
YBX3-204ENST00000366290 NBNO60934 754 aa8.63□□□□□ -1.03
YBX3-204ENST00000366290 FSBPO95073 299 aa8.63□□□□□ -1.03
YBX3-204ENST00000366290 LY86O95711 162 aa8.63□□□□□ -1.03
YBX3-204ENST00000366290 RPLP2P05387 115 aaKnown RBP8.63□□□□□ -1.03
YBX3-204ENST00000366290 ACTN1P12814 892 aa8.63□□□□□ -1.03
YBX3-204ENST00000366290 U2AF2P26368 475 aaKnown RBP eCLIP8.63□□□□□ -1.037e-9■□□□□ 10.4
YBX3-204ENST00000366290 DDIT3P35638 169 aa8.63□□□□□ -1.03
YBX3-204ENST00000366290 PKP1Q13835 747 aa8.63□□□□□ -1.03
YBX3-204ENST00000366290 BECN1Q14457 450 aa8.63□□□□□ -1.03
YBX3-204ENST00000366290 Q4G0T1 1027 aa8.63□□□□□ -1.03
YBX3-204ENST00000366290 MARCH8Q5T0T0 291 aa8.63□□□□□ -1.03
YBX3-204ENST00000366290 ZNF618Q5T7W0 954 aa8.63□□□□□ -1.03
YBX3-204ENST00000366290 TAF2Q6P1X5 1199 aa8.63□□□□□ -1.03
YBX3-204ENST00000366290 SMAP1Q8IYB5 467 aaPredicted RBP8.63□□□□□ -1.03
YBX3-204ENST00000366290 TTC8Q8TAM2 541 aa8.63□□□□□ -1.03
YBX3-204ENST00000366290 PHOSPHO2Q8TCD6 241 aa8.63□□□□□ -1.03
YBX3-204ENST00000366290 ADAMTS17Q8TE56 1095 aa8.63□□□□□ -1.03
YBX3-204ENST00000366290 RIT2Q99578 217 aa8.63□□□□□ -1.03
YBX3-204ENST00000366290 BARX1Q9HBU1 254 aaPredicted RBP8.63□□□□□ -1.03
YBX3-204ENST00000366290 DMRT3Q9NQL9 472 aa8.63□□□□□ -1.03
YBX3-204ENST00000366290 SETD4Q9NVD3 440 aa8.63□□□□□ -1.03
YBX3-204ENST00000366290 MTMR6Q9Y217 621 aa8.63□□□□□ -1.03
YBX3-204ENST00000366290 KIF3AQ9Y496 699 aa8.63□□□□□ -1.03
YBX3-204ENST00000366290 SLC4A7Q9Y6M7 1214 aa8.63□□□□□ -1.03
YBX3-204ENST00000366290 SIP14410 1827 aa8.63□□□□□ -1.03
YBX3-204ENST00000366290 NCOR1O75376 2440 aa8.63□□□□□ -1.03
YBX3-204ENST00000366290 EVPLQ92817 2033 aa8.63□□□□□ -1.03
YBX3-204ENST00000366290 A0A1W2PR48 441 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 GOLGA6CA6NDK9 693 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 GOLGA6BA6NDN3 693 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 MSH4O15457 936 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 TMEM127O75204 238 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 GOLGA6DP0CG33 693 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 AKAP5P24588 427 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 CSF2RBP32927 897 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 THPOP40225 353 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 MEOX1P50221 254 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 SESN2P58004 480 aaPredicted RBP8.62□□□□□ -1.03
YBX3-204ENST00000366290 SP4Q02446 784 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 PPFIA1Q13136 1202 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 TRIM29Q14134 588 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms