RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 ZNF461Q8TAF7 563 aa11.84□□□□□ -0.51
CSNK1E-202ENST00000366216 ZSCAN18Q8TBC5 510 aaPredicted RBP11.84□□□□□ -0.51
CSNK1E-202ENST00000366216 UBE2Q2Q8WVN8 375 aa11.84□□□□□ -0.51
CSNK1E-202ENST00000366216 HPDLQ96IR7 371 aa11.84□□□□□ -0.51
CSNK1E-202ENST00000366216 ZMAT2Q96NC0 199 aaKnown RBP11.84□□□□□ -0.51
CSNK1E-202ENST00000366216 ACP6Q9NPH0 428 aa11.84□□□□□ -0.51
CSNK1E-202ENST00000366216 AGAP1Q9UPQ3 857 aa11.84□□□□□ -0.51
CSNK1E-202ENST00000366216 SAR1BQ9Y6B6 198 aa11.84□□□□□ -0.51
CSNK1E-202ENST00000366216 KALRNO60229 2985 aa11.84□□□□□ -0.51
CSNK1E-202ENST00000366216 LNP1A1A4G5 178 aa11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 MYBPHLA2RUH7 354 aa11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 GRID2IPA4D2P6 1211 aa11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 TMCO5BA8MYB1 307 aa11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 DYNC1I1O14576 645 aa11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 ENC1O14682 589 aa11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 CHADO15335 359 aa11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 PALMO75781 387 aa11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 MTA2O94776 668 aa11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 ABLIM3O94929 683 aa11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 THP07101 528 aa11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 PAEPP09466 180 aa11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 TCP1P17987 556 aaKnown RBP11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 ELF1P32519 619 aa11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 NOP2P46087 812 aaKnown RBP11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 BRCC3P46736 316 aa11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 ROR1Q01973 937 aa11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 SOX4Q06945 474 aaPredicted RBP11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 MYO1EQ12965 1108 aa11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 PON2Q15165 354 aa11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 WDR72Q3MJ13 1102 aa11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 PLK5Q496M5 336 aa11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 KIAA1211LQ6NV74 962 aa11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 ANKS3Q6ZW76 656 aa11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 YAF2Q8IY57 180 aa11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 SYCE1Q8N0S2 351 aa11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 TMEM130Q8N3G9 435 aa11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 CEP112Q8N8E3 955 aa11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 LRRC57Q8N9N7 239 aa11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 TPCN2Q8NHX9 752 aa11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 SLC35G2Q8TBE7 412 aa11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 E2F7Q96AV8 911 aa11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 CARD6Q9BX69 1037 aa11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 THAP2Q9H0W7 228 aa11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 GOLGA2P5Q9HBQ8 144 aa11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 NXF1Q9UBU9 619 aaKnown RBP11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 SNX12Q9UMY4 172 aa11.83□□□□□ -0.52
CSNK1E-202ENST00000366216 MYO18AQ92614 2054 aaKnown RBP11.82□□□□□ -0.52
CSNK1E-202ENST00000366216 SMIM28A0A1B0GU29 152 aa11.82□□□□□ -0.52
CSNK1E-202ENST00000366216 TMEM189-UBE2V1I3L0A0 370 aa11.82□□□□□ -0.52
CSNK1E-202ENST00000366216 THAP12O43422 761 aa11.82□□□□□ -0.52
CSNK1E-202ENST00000366216 CYP1A2P05177 515 aa11.82□□□□□ -0.52
CSNK1E-202ENST00000366216 MYBL1P10243 752 aa11.82□□□□□ -0.52
CSNK1E-202ENST00000366216 ABCB4P21439 1286 aa11.82□□□□□ -0.52
CSNK1E-202ENST00000366216 TUBB4BP68371 445 aa11.82□□□□□ -0.52
CSNK1E-202ENST00000366216 CREB5Q02930 508 aa11.82□□□□□ -0.52
CSNK1E-202ENST00000366216 CENPCQ03188 943 aa11.82□□□□□ -0.52
CSNK1E-202ENST00000366216 FCHO2Q0JRZ9 810 aa11.82□□□□□ -0.52
CSNK1E-202ENST00000366216 GLRA4Q5JXX5 417 aa11.82□□□□□ -0.52
CSNK1E-202ENST00000366216 MEI1Q5TIA1 1274 aa11.82□□□□□ -0.52
CSNK1E-202ENST00000366216 DNAAF5Q86Y56 855 aa11.82□□□□□ -0.52
CSNK1E-202ENST00000366216 TCEAL8Q8IYN2 117 aa11.82□□□□□ -0.52
CSNK1E-202ENST00000366216 MNS1Q8NEH6 495 aa11.82□□□□□ -0.52
CSNK1E-202ENST00000366216 ZNF606Q8WXB4 792 aa11.82□□□□□ -0.52
CSNK1E-202ENST00000366216 ARHGEF26Q96DR7 871 aa11.82□□□□□ -0.52
CSNK1E-202ENST00000366216 TRIM11Q96F44 468 aa11.82□□□□□ -0.52
CSNK1E-202ENST00000366216 VCPIP1Q96JH7 1222 aa11.82□□□□□ -0.52
CSNK1E-202ENST00000366216 TLR10Q9BXR5 811 aa11.82□□□□□ -0.52
CSNK1E-202ENST00000366216 DUSP15Q9H1R2 295 aaPredicted RBP11.82□□□□□ -0.52
CSNK1E-202ENST00000366216 CYP4F11Q9HBI6 524 aa11.82□□□□□ -0.52
CSNK1E-202ENST00000366216 UVRAGQ9P2Y5 699 aa11.82□□□□□ -0.52
CSNK1E-202ENST00000366216 GTF3C4Q9UKN8 822 aa11.82□□□□□ -0.52
CSNK1E-202ENST00000366216 PCDHGC3Q9UN70 934 aa11.82□□□□□ -0.52
CSNK1E-202ENST00000366216 MSRB2Q9Y3D2 182 aa11.82□□□□□ -0.52
CSNK1E-202ENST00000366216 HYOU1Q9Y4L1 999 aa11.82□□□□□ -0.52
CSNK1E-202ENST00000366216 INSL5Q9Y5Q6 135 aa11.82□□□□□ -0.52
CSNK1E-202ENST00000366216 SCN1AP35498 2009 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 BCLAF3A2AJT9 711 aaKnown RBP11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 EFCAB8A8MWE9 144 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 PIRO00625 290 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 CES2O00748 559 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 HYAL3O43820 417 aaPredicted RBP11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 CILPO75339 1184 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 B3GAT3O94766 335 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 VNN2O95498 520 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 LSM8O95777 96 aaKnown RBP11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 ATF2P15336 505 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 CD58P19256 250 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 CDH5P33151 784 aaPredicted RBP11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 PNPLA4P41247 253 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 CLCNKBP51801 687 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 GUCY2FP51841 1108 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 TNNC1P63316 161 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 NOMO3P69849 1222 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 CKAP4Q07065 602 aaKnown RBP11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 INCA1Q0VD86 236 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 TEAD2Q15562 447 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 ELF2Q15723 593 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 C9orf57Q5W0N0 161 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 SLC8B1Q6J4K2 584 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 SCARA5Q6ZMJ2 495 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms