RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 HOXA7P31268 230 aaPredicted RBP2.83□□□□□ -1.96
RNU4-42P-201ENST00000364738 ALDH7A1P49419 539 aaKnown RBP2.83□□□□□ -1.96
RNU4-42P-201ENST00000364738 COPAP53621 1224 aa2.83□□□□□ -1.96
RNU4-42P-201ENST00000364738 PPATQ06203 517 aa2.83□□□□□ -1.96
RNU4-42P-201ENST00000364738 MTA1Q13330 715 aa2.83□□□□□ -1.96
RNU4-42P-201ENST00000364738 CNGA2Q16280 664 aa2.83□□□□□ -1.96
RNU4-42P-201ENST00000364738 EARS2Q5JPH6 523 aaKnown RBP2.83□□□□□ -1.96
RNU4-42P-201ENST00000364738 GRHL2Q6ISB3 625 aa2.83□□□□□ -1.96
RNU4-42P-201ENST00000364738 MZT2AQ6P582 158 aa2.83□□□□□ -1.96
RNU4-42P-201ENST00000364738 RBM44Q6ZP01 1051 aaKnown RBP2.83□□□□□ -1.96
RNU4-42P-201ENST00000364738 KRT78Q8N1N4 520 aa2.83□□□□□ -1.96
RNU4-42P-201ENST00000364738 TMEM199Q8N511 208 aa2.83□□□□□ -1.96
RNU4-42P-201ENST00000364738 B4GALNT2Q8NHY0 566 aa2.83□□□□□ -1.96
RNU4-42P-201ENST00000364738 RUNDC1Q96C34 613 aa2.83□□□□□ -1.96
RNU4-42P-201ENST00000364738 GPATCH3Q96I76 525 aa2.83□□□□□ -1.96
RNU4-42P-201ENST00000364738 ZNF479Q96JC4 524 aa2.83□□□□□ -1.96
RNU4-42P-201ENST00000364738 TMEM204Q9BSN7 226 aa2.83□□□□□ -1.96
RNU4-42P-201ENST00000364738 TUBB6Q9BUF5 446 aa2.83□□□□□ -1.96
RNU4-42P-201ENST00000364738 SLCO5A1Q9H2Y9 848 aa2.83□□□□□ -1.96
RNU4-42P-201ENST00000364738 MLXIPLQ9NP71 852 aa2.83□□□□□ -1.96
RNU4-42P-201ENST00000364738 PAPOLBQ9NRJ5 636 aaKnown RBP2.83□□□□□ -1.96
RNU4-42P-201ENST00000364738 VPS45Q9NRW7 570 aa2.83□□□□□ -1.96
RNU4-42P-201ENST00000364738 COL20A1Q9P218 1284 aa2.83□□□□□ -1.96
RNU4-42P-201ENST00000364738 DKK4Q9UBT3 224 aa2.83□□□□□ -1.96
RNU4-42P-201ENST00000364738 VPS51Q9UID3 782 aa2.83□□□□□ -1.96
RNU4-42P-201ENST00000364738 OGDHLQ9ULD0 1010 aa2.83□□□□□ -1.96
RNU4-42P-201ENST00000364738 HPSEQ9Y251 543 aa2.83□□□□□ -1.96
RNU4-42P-201ENST00000364738 NOTCH4Q99466 2003 aa2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 TMEM272A0A1B0GTI8 110 aa2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 EME2A4GXA9 379 aaPredicted RBP2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 PRPF3O43395 683 aaKnown RBP2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 TLX3O43711 291 aaPredicted RBP2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 ZC3H11AO75152 810 aaKnown RBP eCLIP2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 RFPL1O75677 317 aa2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 WDR47O94967 919 aa2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 MBPP02686 304 aaPredicted RBP2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 NGFRP08138 427 aa2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 HTR7P34969 479 aa2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 CARSP49589 748 aaKnown RBP2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 VPS41P49754 854 aa2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 ZXDBP98169 803 aa2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 CNGA3Q16281 694 aa2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 LCE1EQ5T753 118 aa2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 MANEALQ5VSG8 457 aa2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 PLAG1Q6DJT9 500 aa2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 UNC13DQ70J99 1090 aa2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 SLC44A5Q8NCS7 719 aa2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 BCAS4Q8TDM0 211 aa2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 IPCEF1Q8WWN9 437 aaPredicted RBP2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 ZDHHC12Q96GR4 267 aa2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 PRR11Q96HE9 360 aaPredicted RBP2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 CHST8Q9H2A9 424 aa2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 FAM204AQ9H8W3 233 aa2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 SAP30LQ9HAJ7 183 aa2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 ZNF287Q9HBT7 754 aa2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 AGO4Q9HCK5 861 aaKnown RBP2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 ZIM2Q9NZV7 527 aa2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 SEMA5BQ9P283 1151 aa2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 PCDHA12Q9UN75 941 aa2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 L1RE1Q9UN81 338 aa2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 ICKQ9UPZ9 632 aa2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 HEMK1Q9Y5R4 338 aaPredicted RBP2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 SPATA31A1Q5TZJ5 1347 aa2.82□□□□□ -1.96
RNU4-42P-201ENST00000364738 C16orf96A6NNT2 1141 aa2.81□□□□□ -1.96
RNU4-42P-201ENST00000364738 ZNF814B7Z6K7 855 aa2.81□□□□□ -1.96
RNU4-42P-201ENST00000364738 SLC28A2O43868 658 aa2.81□□□□□ -1.96
RNU4-42P-201ENST00000364738 UGDHO60701 494 aa2.81□□□□□ -1.96
RNU4-42P-201ENST00000364738 MAP4K4O95819 1239 aaPredicted RBP2.81□□□□□ -1.96
RNU4-42P-201ENST00000364738 SLC3A2P08195 630 aaKnown RBP2.81□□□□□ -1.96
RNU4-42P-201ENST00000364738 PDGFRBP09619 1106 aa2.81□□□□□ -1.96
RNU4-42P-201ENST00000364738 TFEBP19484 476 aa2.81□□□□□ -1.96
RNU4-42P-201ENST00000364738 PGGT1BP53609 377 aa2.81□□□□□ -1.96
RNU4-42P-201ENST00000364738 CACNB3P54284 484 aa2.81□□□□□ -1.96
RNU4-42P-201ENST00000364738 EPHB1P54762 984 aa2.81□□□□□ -1.96
RNU4-42P-201ENST00000364738 P2RX3P56373 397 aa2.81□□□□□ -1.96
RNU4-42P-201ENST00000364738 ANAPC15P60006 121 aa2.81□□□□□ -1.96
RNU4-42P-201ENST00000364738 FMO1Q01740 532 aa2.81□□□□□ -1.96
RNU4-42P-201ENST00000364738 HYAL1Q12794 435 aa2.81□□□□□ -1.96
RNU4-42P-201ENST00000364738 DNASE1L3Q13609 305 aa2.81□□□□□ -1.96
RNU4-42P-201ENST00000364738 PTGR1Q14914 329 aa2.81□□□□□ -1.96
RNU4-42P-201ENST00000364738 INPP5JQ15735 1006 aaPredicted RBP2.81□□□□□ -1.96
RNU4-42P-201ENST00000364738 Q6ZTC4 211 aa2.81□□□□□ -1.96
RNU4-42P-201ENST00000364738 TRAPPC11Q7Z392 1133 aa2.81□□□□□ -1.96
RNU4-42P-201ENST00000364738 UEVLDQ8IX04 471 aa2.81□□□□□ -1.96
RNU4-42P-201ENST00000364738 DCP1BQ8IZD4 617 aaKnown RBP2.81□□□□□ -1.96
RNU4-42P-201ENST00000364738 ADGRF4Q8IZF3 695 aa2.81□□□□□ -1.96
RNU4-42P-201ENST00000364738 MBD3L2Q8NHZ7 208 aaPredicted RBP2.81□□□□□ -1.96
RNU4-42P-201ENST00000364738 LRTOMTQ8WZ04 291 aa2.81□□□□□ -1.96
RNU4-42P-201ENST00000364738 RNF26Q9BY78 433 aaPredicted RBP2.81□□□□□ -1.96
RNU4-42P-201ENST00000364738 LRRC27Q9C0I9 530 aa2.81□□□□□ -1.96
RNU4-42P-201ENST00000364738 MOV10Q9HCE1 1003 aaKnown RBP2.81□□□□□ -1.96
RNU4-42P-201ENST00000364738 ABHD10Q9NUJ1 306 aa2.81□□□□□ -1.96
RNU4-42P-201ENST00000364738 ASNSD1Q9NWL6 643 aa2.81□□□□□ -1.96
RNU4-42P-201ENST00000364738 ZNF212Q9UDV6 495 aa2.81□□□□□ -1.96
RNU4-42P-201ENST00000364738 VPS4AQ9UN37 437 aa2.81□□□□□ -1.96
RNU4-42P-201ENST00000364738 COL15A1P39059 1388 aa2.81□□□□□ -1.96
RNU4-42P-201ENST00000364738 hCG_2014768A0A024R1R8 64 aa2.8□□□□□ -1.96
RNU4-42P-201ENST00000364738 TRBV5-3A0A0A0MS03 114 aa2.8□□□□□ -1.96
RNU4-42P-201ENST00000364738 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.8□□□□□ -1.96
RNU4-42P-201ENST00000364738 A0A1W2PPC1 479 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms