RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 OTUD4Q01804 1114 aaKnown RBP9.51□□□□□ -0.89
CALD1-202ENST00000361901 TAP1Q03518 808 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 TBL3Q12788 808 aaKnown RBP9.51□□□□□ -0.89
CALD1-202ENST00000361901 MMRN1Q13201 1228 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 TMED2Q15363 201 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 HSP90AA5PQ58FG0 334 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 DCAF12L1Q5VU92 463 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 C9orf57Q5W0N0 161 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 ANO7Q6IWH7 933 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 IRGCQ6NXR0 463 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 KLC3Q6P597 504 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 ZBED8Q8IZ13 594 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 TTC39CQ8N584 583 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 FAF2Q96CS3 445 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 DDX50Q9BQ39 737 aaKnown RBP9.51□□□□□ -0.89
CALD1-202ENST00000361901 AVENQ9NQS1 362 aaPredicted RBP9.51□□□□□ -0.89
CALD1-202ENST00000361901 SLC38A7Q9NVC3 462 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 RNF186Q9NXI6 227 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 DNPEPQ9ULA0 475 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 GREB1LQ9C091 1923 aaPredicted RBP9.51□□□□□ -0.89
CALD1-202ENST00000361901 DOCK1Q14185 1865 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 COL1A2P08123 1366 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 M0QYT0 321 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 KCNN4O15554 427 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 CHN1P15882 459 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 RPL21P46778 160 aaKnown RBP9.51□□□□□ -0.89
CALD1-202ENST00000361901 INAQ16352 499 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 LONRF1Q17RB8 773 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 CCDC142Q17RM4 750 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 SH3PXD2AQ5TCZ1 1133 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 THOC7Q6I9Y2 204 aaKnown RBP9.51□□□□□ -0.89
CALD1-202ENST00000361901 SPOCD1Q6ZMY3 1216 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 FAM183BPQ6ZVS7 135 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 MON1BQ7L1V2 547 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 CCNJLQ8IV13 435 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 RNF139Q8WU17 664 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 DDX1Q92499 740 aaKnown RBP9.51□□□□□ -0.89
CALD1-202ENST00000361901 CCT6BQ92526 530 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 ZNF518BQ9C0D4 1074 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 SENP6Q9GZR1 1112 aaPredicted RBP9.51□□□□□ -0.89
CALD1-202ENST00000361901 RSAD1Q9HA92 442 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 ABCF3Q9NUQ8 709 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 ARHGEF38Q9NXL2 777 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 TUBA8Q9NY65 449 aaPredicted RBP9.51□□□□□ -0.89
CALD1-202ENST00000361901 NKIRAS1Q9NYS0 192 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 RABL2AQ9UBK7 228 aaPredicted RBP9.51□□□□□ -0.89
CALD1-202ENST00000361901 PRELID1Q9Y255 219 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 ADGRA2Q96PE1 1338 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 CILPO75339 1184 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 PEX5P50542 639 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 ITKQ08881 620 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 LRRC14Q15048 493 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 CNGA2Q16280 664 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 MARCH8Q5T0T0 291 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 TXNRD3NBQ6F5E7 133 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 PGBD4Q96DM1 585 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 SNF8Q96H20 258 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 CYTH2Q99418 400 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 SEMA4AQ9H3S1 761 aa9.51□□□□□ -0.89
CALD1-202ENST00000361901 DDX56Q9NY93 547 aaKnown RBP9.51□□□□□ -0.89
CALD1-202ENST00000361901 FBXO9Q9UK97 447 aaPredicted RBP9.51□□□□□ -0.89
CALD1-202ENST00000361901 NT5C1B-RDH14C9J2C7 533 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 KRT16P08779 473 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 PAEPP09466 180 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 FUT4P22083 530 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 PNPLA4P41247 253 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 TUFMP49411 452 aaKnown RBP9.5□□□□□ -0.89
CALD1-202ENST00000361901 ARPC4P59998 168 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 AP1B1Q10567 949 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 PDIA2Q13087 525 aaKnown RBP9.5□□□□□ -0.89
CALD1-202ENST00000361901 TFDP2Q14188 446 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 LBRQ14739 615 aaKnown RBP9.5□□□□□ -0.89
CALD1-202ENST00000361901 LACTB2Q53H82 288 aaPredicted RBP9.5□□□□□ -0.89
CALD1-202ENST00000361901 DPY19L2P1Q6NXN4 242 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 PMF1Q6P1K2 205 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 PHF13Q86YI8 300 aaPredicted RBP9.5□□□□□ -0.89
CALD1-202ENST00000361901 URGCPQ8TCY9 931 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 CFAP36Q96G28 342 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 RUNDC3BQ96NL0 473 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 PRMT1Q99873 361 aaKnown RBP9.5□□□□□ -0.89
CALD1-202ENST00000361901 CEP41Q9BYV8 373 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 DDX18Q9NVP1 670 aaKnown RBP9.5□□□□□ -0.89
CALD1-202ENST00000361901 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.5□□□□□ -0.89
CALD1-202ENST00000361901 A6NHS1 94 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 PIAS1O75925 651 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 BDNFP23560 247 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 CLCNKBP51801 687 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 TKTL1P51854 596 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 TFDP3Q5H9I0 405 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 SPATA2LQ8IUW3 424 aaPredicted RBP9.5□□□□□ -0.89
CALD1-202ENST00000361901 CCDC110Q8TBZ0 833 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 PYROXD1Q8WU10 500 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 VCPIP1Q96JH7 1222 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 AGAP3Q96P47 875 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 DEFB118Q96PH6 123 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 STAP1Q9ULZ2 295 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 LRCH1Q9Y2L9 728 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 CEP290O15078 2479 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 ATAD5Q96QE3 1844 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 EXOC1LA0A1B0GW35 172 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms