RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 ARHGEF1Q92888 912 aaKnown RBP11.81□□□□□ -0.52
CNOT3-202ENST00000358389 GCOM2Q9BZD3 368 aaPredicted RBP11.81□□□□□ -0.52
CNOT3-202ENST00000358389 TMEM8AQ9HCN3 771 aa11.81□□□□□ -0.52
CNOT3-202ENST00000358389 SNX13Q9Y5W8 968 aa11.81□□□□□ -0.52
CNOT3-202ENST00000358389 TMEM150BA6NC51 233 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 AOC1P19801 751 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 CD151P48509 253 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 AOC3Q16853 763 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 HSF5Q4G112 596 aaPredicted RBP11.8□□□□□ -0.52
CNOT3-202ENST00000358389 TMEM214Q6NUQ4 689 aaKnown RBP11.8□□□□□ -0.52
CNOT3-202ENST00000358389 GRIN3AQ8TCU5 1115 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 ACTRT2Q8TDY3 377 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 C20orf96Q9NUD7 363 aaPredicted RBP11.8□□□□□ -0.52
CNOT3-202ENST00000358389 EPS15L1Q9UBC2 864 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 VAV3Q9UKW4 847 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 SNCAIPQ9Y6H5 919 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 ATRNL1Q5VV63 1379 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 SF3B1O75533 1304 aaKnown RBP eCLIP11.8□□□□□ -0.522e-7■■■■■ 273.6
CNOT3-202ENST00000358389 A0A0B4J269 797 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 C1orf232A0A0U1RR37 186 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 SDR42E2A6NKP2 422 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 INO80B-WBP1J3KQ70 363 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 BPGMP07738 259 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 DHRS4L1P0CG22 281 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 CCDC130P13994 396 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 TFAMQ00059 246 aaKnown RBP11.8□□□□□ -0.52
CNOT3-202ENST00000358389 CDKL1Q00532 357 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 CYP4A22Q5TCH4 519 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 SNX32Q86XE0 403 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 SLC7A5P1Q8MH63 180 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 FAM156AQ8NDB6 213 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 SPATA18Q8TC71 538 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 IRGQQ8WZA9 623 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 ATXN7L3BQ96GX2 97 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 HSD17B14Q9BPX1 270 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 INO80BQ9C086 356 aaPredicted RBP11.8□□□□□ -0.52
CNOT3-202ENST00000358389 KLHL25Q9H0H3 589 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 GID8Q9NWU2 228 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 C1orf167Q5SNV9 1468 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 CYP3A7-CYP3A51PA0A087WV96 503 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 PSMD12O00232 456 aaPredicted RBP11.8□□□□□ -0.52
CNOT3-202ENST00000358389 DENRO43583 198 aaKnown RBP11.8□□□□□ -0.52
CNOT3-202ENST00000358389 STAM2O75886 525 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 LDHAP00338 332 aaKnown RBP11.8□□□□□ -0.52
CNOT3-202ENST00000358389 CYP3A7P24462 503 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 ETFBP38117 255 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 NFIXQ14938 502 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 OGFRL1Q5TC84 451 aaPredicted RBP11.8□□□□□ -0.52
CNOT3-202ENST00000358389 INTS5Q6P9B9 1019 aaKnown RBP11.8□□□□□ -0.52
CNOT3-202ENST00000358389 BNC2Q6ZN30 1099 aaPredicted RBP11.8□□□□□ -0.52
CNOT3-202ENST00000358389 LRRN4Q8WUT4 740 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 ZNF668Q96K58 619 aaPredicted RBP11.8□□□□□ -0.52
CNOT3-202ENST00000358389 WDR11Q9BZH6 1224 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 TRPC7Q9HCX4 862 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 NARFQ9UHQ1 456 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 DRG1Q9Y295 367 aaKnown RBP11.8□□□□□ -0.52
CNOT3-202ENST00000358389 EFR3BQ9Y2G0 817 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 UBE4BO95155 1302 aa11.8□□□□□ -0.52
CNOT3-202ENST00000358389 FUOMA2VDF0 154 aa11.79□□□□□ -0.52
CNOT3-202ENST00000358389 CXorf49A8MYA2 514 aaPredicted RBP11.79□□□□□ -0.52
CNOT3-202ENST00000358389 K7EPI3 171 aa11.79□□□□□ -0.52
CNOT3-202ENST00000358389 HSPA13P48723 471 aa11.79□□□□□ -0.52
CNOT3-202ENST00000358389 CDK9P50750 372 aaKnown RBP11.79□□□□□ -0.52
CNOT3-202ENST00000358389 ZBTB17Q13105 803 aa11.79□□□□□ -0.52
CNOT3-202ENST00000358389 N4BP2L1Q5TBK1 243 aaPredicted RBP11.79□□□□□ -0.52
CNOT3-202ENST00000358389 GPR107Q5VW38 600 aa11.79□□□□□ -0.52
CNOT3-202ENST00000358389 SCARA5Q6ZMJ2 495 aa11.79□□□□□ -0.52
CNOT3-202ENST00000358389 Q6ZNX1 250 aa11.79□□□□□ -0.52
CNOT3-202ENST00000358389 OTOP1Q7RTM1 612 aa11.79□□□□□ -0.52
CNOT3-202ENST00000358389 P2RX7Q99572 595 aaKnown RBP11.79□□□□□ -0.52
CNOT3-202ENST00000358389 PKP2Q99959 881 aa11.79□□□□□ -0.52
CNOT3-202ENST00000358389 EBF1Q9UH73 591 aa11.79□□□□□ -0.52
CNOT3-202ENST00000358389 ITGA11Q9UKX5 1188 aa11.79□□□□□ -0.52
CNOT3-202ENST00000358389 SSX2IPQ9Y2D8 614 aa11.79□□□□□ -0.52
CNOT3-202ENST00000358389 hCG_1818297A0A087WSY0 165 aa11.79□□□□□ -0.52
CNOT3-202ENST00000358389 SLC18A2Q05940 514 aa11.79□□□□□ -0.52
CNOT3-202ENST00000358389 ADGRE1Q14246 886 aa11.79□□□□□ -0.52
CNOT3-202ENST00000358389 HADHQ16836 314 aaKnown RBP11.79□□□□□ -0.52
CNOT3-202ENST00000358389 DCAF15Q66K64 600 aa11.79□□□□□ -0.52
CNOT3-202ENST00000358389 TTC33Q6PID6 262 aaPredicted RBP11.79□□□□□ -0.52
CNOT3-202ENST00000358389 UTS2BQ765I0 119 aa11.79□□□□□ -0.52
CNOT3-202ENST00000358389 SLC9A9Q8IVB4 645 aa11.79□□□□□ -0.52
CNOT3-202ENST00000358389 SLC15A3Q8IY34 581 aa11.79□□□□□ -0.52
CNOT3-202ENST00000358389 SLC35B4Q969S0 331 aa11.79□□□□□ -0.52
CNOT3-202ENST00000358389 HEPHQ9BQS7 1158 aa11.79□□□□□ -0.52
CNOT3-202ENST00000358389 EIF2AQ9BY44 585 aaKnown RBP11.79□□□□□ -0.52
CNOT3-202ENST00000358389 RNPEPQ9H4A4 650 aa11.79□□□□□ -0.52
CNOT3-202ENST00000358389 ITGAVP06756 1048 aa11.79□□□□□ -0.52
CNOT3-202ENST00000358389 UNGP13051 313 aaPredicted RBP11.79□□□□□ -0.52
CNOT3-202ENST00000358389 XRCC1P18887 633 aaPredicted RBP11.79□□□□□ -0.52
CNOT3-202ENST00000358389 RPL10P27635 214 aaKnown RBP11.79□□□□□ -0.52
CNOT3-202ENST00000358389 MAP4P27816 1152 aaKnown RBP11.79□□□□□ -0.52
CNOT3-202ENST00000358389 NR1D2Q14995 579 aa11.79□□□□□ -0.52
CNOT3-202ENST00000358389 IFNLR1Q8IU57 520 aaPredicted RBP11.79□□□□□ -0.52
CNOT3-202ENST00000358389 CENPSQ8N2Z9 138 aa11.79□□□□□ -0.52
CNOT3-202ENST00000358389 DDX1Q92499 740 aaKnown RBP11.79□□□□□ -0.52
CNOT3-202ENST00000358389 LENG9Q96B70 501 aa11.79□□□□□ -0.52
CNOT3-202ENST00000358389 FADS3Q9Y5Q0 445 aa11.79□□□□□ -0.52
CNOT3-202ENST00000358389 EEF1B2P24534 225 aaKnown RBP11.79□□□□□ -0.52
CNOT3-202ENST00000358389 RPS6P62753 249 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms