RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, human

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNE2-204	ENST00000358025	NAMPT	P43490	491 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	CTTN	Q14247	550 aa	Known RBP	4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	CEP78	Q5JTW2	689 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	CLEC4F	Q8N1N0	589 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	ZCCHC7	Q8N3Z6	543 aa	Known RBP	4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	TCP10L	Q8TDR4	215 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	CENPN	Q96H22	339 aa	Predicted RBP	4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	MRPL57	Q9BQC6	102 aa	Known RBP	4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	ADAMTS10	Q9H324	1103 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	TOPORS	Q9NS56	1045 aa	Predicted RBP	4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	USE1	Q9NZ43	259 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025		H0YAE9	185 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	UGT3A1	Q6NUS8	523 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	NLGN1	Q8N2Q7	840 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	FNDC8	Q8TC99	324 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	C19orf60	Q96EN9	201 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	PAFAH2	Q99487	392 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	HINFP	Q9BQA5	517 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	MORF4L1	Q9UBU8	362 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	KLHL3	Q9UH77	587 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	ANAPC2	Q9UJX6	822 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	BTBD3	Q9Y2F9	522 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	NDUFAF1	Q9Y375	327 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	COPG1	Q9Y678	874 aa	Known RBP	4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	CSE1L	P55060	971 aa	Known RBP	4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	DPP8	Q6V1X1	898 aa	Predicted RBP	4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	FAM92B	Q6ZTR7	304 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	GALNT6	Q8NCL4	622 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	SNIP1	Q8TAD8	396 aa	Known RBP	4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	MRPL39	Q9NYK5	338 aa	Known RBP	4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	SPANXN2	Q5MJ10	180 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	PRPF31	Q8WWY3	499 aa	Known RBP	4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	GATA6	Q92908	595 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	NSUN4	Q96CB9	384 aa	Known RBP	4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	ASB7	Q9H672	318 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	RAPGEFL1	Q9UHV5	662 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	PCDHA10	Q9Y5I2	948 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	DCC	P43146	1447 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	AIM2	O14862	343 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	CLIC2	O15247	247 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	NOL4	O94818	638 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	ABCB1	P08183	1280 aa	Predicted RBP	4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	HMBS	P08397	361 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	RPA3	P35244	121 aa	Predicted RBP	4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	GTF2B	Q00403	316 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	ADGRE1	Q14246	886 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	SVOPL	Q8N434	492 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	CEP170P1	Q96L14	293 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	CPXM1	Q96SM3	734 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025		M0R2N6	131 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	MMP8	P22894	467 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	CASP1	P29466	404 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	TYSND1	Q2T9J0	566 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	PABPC1L	Q4VXU2	614 aa	Known RBP	4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	DHFR2	Q86XF0	187 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	KIAA2013	Q8IYS2	634 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	ST13P5	Q8NFI4	369 aa	Predicted RBP	4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	ITGA4	P13612	1032 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	ANXA11	P50995	505 aa	Known RBP	4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	EZH2	Q15910	746 aa	Known RBP	4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	MOG	Q16653	247 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	PARD3B	Q8TEW8	1205 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	RORB	Q92753	470 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	EPHB1	P54762	984 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	ZNF667	Q5HYK9	610 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	C6orf52	Q5T4I8	152 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	XKRX	Q6PP77	449 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	DNAAF3	Q8N9W5	541 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	SLC45A3	Q96JT2	553 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	AAR2	Q9Y312	384 aa	Known RBP	4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	DENND3	A2RUS2	1198 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	PDGFRB	P09619	1106 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	USP17L8	P0C7I0	530 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	ZNF23	P17027	643 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	PNPLA4	P41247	253 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	OTUD4	Q01804	1114 aa	Known RBP	4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	IL18R1	Q13478	541 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	ZNF699	Q32M78	642 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	DPH6	Q7L8W6	267 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	ANKRD52	Q8NB46	1076 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	GPRASP2	Q96D09	838 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	ABHD8	Q96I13	439 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	KLHL25	Q9H0H3	589 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	JAG2	Q9Y219	1238 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	SNX13	Q9Y5W8	968 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	SLC9A1	P19634	815 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	MLH1	P40692	756 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	DLGAP5	Q15398	846 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	TNIP3	Q96KP6	325 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	PSME2	Q9UL46	239 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	NDUFB9	Q9Y6M9	179 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	NPHP3-ACAD11	A0A0J9YXS1	232 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	PTGIR	P43119	386 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	KCNJ1	P48048	391 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	RUNX1T1	Q06455	604 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	GEN1	Q17RS7	908 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	ACCSL	Q4AC99	568 aa		4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	KHDC1	Q4VXA5	237 aa	Known RBP	4.23	□□□□□ -1.73
SYNE2-204	ENST00000358025	MAGEB3	O15480	346 aa		4.23	□□□□□ -1.73

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