RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 CHD9Q3L8U1 2897 aa17.74■□□□□ 0.43
TPM1-205ENST00000357980 CCDC151A5D8V7 595 aa17.74■□□□□ 0.43
TPM1-205ENST00000357980 I6L893 689 aaPredicted RBP17.74■□□□□ 0.43
TPM1-205ENST00000357980 CST8O60676 142 aa17.74■□□□□ 0.43
TPM1-205ENST00000357980 CXCR3P49682 368 aa17.74■□□□□ 0.43
TPM1-205ENST00000357980 AIF1P55008 147 aa17.74■□□□□ 0.43
TPM1-205ENST00000357980 CREMQ03060 361 aa17.74■□□□□ 0.43
TPM1-205ENST00000357980 SCAPQ12770 1279 aa17.74■□□□□ 0.43
TPM1-205ENST00000357980 BRD3Q15059 726 aa17.74■□□□□ 0.43
TPM1-205ENST00000357980 ARHGAP18Q8N392 663 aa17.74■□□□□ 0.43
TPM1-205ENST00000357980 FBXO32Q969P5 355 aa17.74■□□□□ 0.43
TPM1-205ENST00000357980 KCTD15Q96SI1 283 aaPredicted RBP17.74■□□□□ 0.43
TPM1-205ENST00000357980 MAGEB5Q9BZ81 275 aa17.74■□□□□ 0.43
TPM1-205ENST00000357980 DHX35Q9H5Z1 703 aaKnown RBP17.74■□□□□ 0.43
TPM1-205ENST00000357980 GDF3Q9NR23 364 aa17.74■□□□□ 0.43
TPM1-205ENST00000357980 FBXW11Q9UKB1 542 aa17.74■□□□□ 0.43
TPM1-205ENST00000357980 SLC38A8A6NNN8 435 aa17.73■□□□□ 0.43
TPM1-205ENST00000357980 TEX28O15482 410 aa17.73■□□□□ 0.43
TPM1-205ENST00000357980 MCM3P25205 808 aa17.73■□□□□ 0.43
TPM1-205ENST00000357980 TNFRSF8P28908 595 aa17.73■□□□□ 0.43
TPM1-205ENST00000357980 BMPR1AP36894 532 aa17.73■□□□□ 0.43
TPM1-205ENST00000357980 KCNJ1P48048 391 aa17.73■□□□□ 0.43
TPM1-205ENST00000357980 GUCY2DQ02846 1103 aa17.73■□□□□ 0.43
TPM1-205ENST00000357980 TAF10Q12962 218 aa17.73■□□□□ 0.43
TPM1-205ENST00000357980 MSANTD2Q6P1R3 559 aa17.73■□□□□ 0.43
TPM1-205ENST00000357980 DRICH1Q6PGQ1 229 aaPredicted RBP17.73■□□□□ 0.43
TPM1-205ENST00000357980 GIPC2Q8TF65 315 aa17.73■□□□□ 0.43
TPM1-205ENST00000357980 SEC14L1Q92503 715 aa17.73■□□□□ 0.43
TPM1-205ENST00000357980 ABHD8Q96I13 439 aa17.73■□□□□ 0.43
TPM1-205ENST00000357980 RNF157Q96PX1 679 aa17.73■□□□□ 0.43
TPM1-205ENST00000357980 FAM118BQ9BPY3 351 aa17.73■□□□□ 0.43
TPM1-205ENST00000357980 ANLNQ9NQW6 1124 aa17.73■□□□□ 0.43
TPM1-205ENST00000357980 TMPRSS4Q9NRS4 437 aa17.73■□□□□ 0.43
TPM1-205ENST00000357980 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.73■□□□□ 0.43
TPM1-205ENST00000357980 LINC01553A4QN01 128 aa17.72■□□□□ 0.43
TPM1-205ENST00000357980 FAM187AA6NFU0 413 aa17.72■□□□□ 0.43
TPM1-205ENST00000357980 IRAK2O43187 625 aa17.72■□□□□ 0.43
TPM1-205ENST00000357980 LIASO43766 372 aa17.72■□□□□ 0.43
TPM1-205ENST00000357980 ZDHHC11BP0C7U3 371 aa17.72■□□□□ 0.43
TPM1-205ENST00000357980 ADRA1BP35368 520 aa17.72■□□□□ 0.43
TPM1-205ENST00000357980 CLCN6P51797 869 aa17.72■□□□□ 0.43
TPM1-205ENST00000357980 SNX1Q13596 522 aa17.72■□□□□ 0.43
TPM1-205ENST00000357980 KCTD19Q17RG1 926 aaPredicted RBP17.72■□□□□ 0.43
TPM1-205ENST00000357980 ANKRD20A8PQ5CZ79 823 aa17.72■□□□□ 0.43
TPM1-205ENST00000357980 PPP6R3Q5H9R7 873 aaPredicted RBP17.72■□□□□ 0.43
TPM1-205ENST00000357980 C9orf50Q5SZB4 431 aa17.72■□□□□ 0.43
TPM1-205ENST00000357980 JAMLQ86YT9 394 aa17.72■□□□□ 0.43
TPM1-205ENST00000357980 CCDC105Q8IYK2 499 aa17.72■□□□□ 0.43
TPM1-205ENST00000357980 PYROXD2Q8N2H3 581 aa17.72■□□□□ 0.43
TPM1-205ENST00000357980 EPB41L5Q9HCM4 733 aa17.72■□□□□ 0.43
TPM1-205ENST00000357980 CLIC5Q9NZA1 410 aa17.72■□□□□ 0.43
TPM1-205ENST00000357980 MAFFQ9ULX9 164 aa17.72■□□□□ 0.43
TPM1-205ENST00000357980 LZTS1Q9Y250 596 aa17.72■□□□□ 0.43
TPM1-205ENST00000357980 SSX2IPQ9Y2D8 614 aa17.72■□□□□ 0.43
TPM1-205ENST00000357980 RANBP2P49792 3224 aaKnown RBP17.72■□□□□ 0.43
TPM1-205ENST00000357980 CNPP09543 421 aaKnown RBP17.72■□□□□ 0.43
TPM1-205ENST00000357980 MYBL2P10244 700 aa17.72■□□□□ 0.43
TPM1-205ENST00000357980 CTNNB1P35222 781 aa17.72■□□□□ 0.43
TPM1-205ENST00000357980 PSEN1P49768 467 aa17.72■□□□□ 0.43
TPM1-205ENST00000357980 DYNLT1P63172 113 aa17.72■□□□□ 0.43
TPM1-205ENST00000357980 TFDP2Q14188 446 aa17.72■□□□□ 0.43
TPM1-205ENST00000357980 RFX6Q8HWS3 928 aa17.72■□□□□ 0.43
TPM1-205ENST00000357980 TCEAL8Q8IYN2 117 aa17.72■□□□□ 0.43
TPM1-205ENST00000357980 PQLC3Q8N755 202 aa17.72■□□□□ 0.43
TPM1-205ENST00000357980 PCDH19Q8TAB3 1148 aa17.72■□□□□ 0.43
TPM1-205ENST00000357980 CASP10Q92851 521 aa17.72■□□□□ 0.43
TPM1-205ENST00000357980 TRIM51Q9BSJ1 452 aa17.72■□□□□ 0.43
TPM1-205ENST00000357980 CYP4F11Q9HBI6 524 aa17.72■□□□□ 0.43
TPM1-205ENST00000357980 TLR8Q9NR97 1041 aaKnown RBP17.72■□□□□ 0.43
TPM1-205ENST00000357980 ARGLU1Q9NWB6 273 aaPredicted RBP17.72■□□□□ 0.43
TPM1-205ENST00000357980 RCOR3Q9P2K3 495 aaPredicted RBP17.72■□□□□ 0.43
TPM1-205ENST00000357980 YIPF1Q9Y548 306 aa17.72■□□□□ 0.43
TPM1-205ENST00000357980 ESYT3A0FGR9 886 aa17.71■□□□□ 0.43
TPM1-205ENST00000357980 APOC4-APOC2K7ER74 178 aa17.71■□□□□ 0.43
TPM1-205ENST00000357980 APOC2P02655 101 aa17.71■□□□□ 0.43
TPM1-205ENST00000357980 SEMA3BQ13214 749 aa17.71■□□□□ 0.43
TPM1-205ENST00000357980 EFHC2Q5JST6 749 aa17.71■□□□□ 0.43
TPM1-205ENST00000357980 SLC9A4Q6AI14 798 aa17.71■□□□□ 0.43
TPM1-205ENST00000357980 CCNI2Q6ZMN8 369 aaPredicted RBP17.71■□□□□ 0.43
TPM1-205ENST00000357980 SND1Q7KZF4 910 aaKnown RBP eCLIP17.71■□□□□ 0.43
TPM1-205ENST00000357980 SLC35B2Q8TB61 432 aa17.71■□□□□ 0.43
TPM1-205ENST00000357980 HNRNPLLQ8WVV9 542 aaKnown RBP17.71■□□□□ 0.43
TPM1-205ENST00000357980 NKD2Q969F2 451 aaPredicted RBP17.71■□□□□ 0.43
TPM1-205ENST00000357980 HAUS1Q96CS2 278 aa17.71■□□□□ 0.43
TPM1-205ENST00000357980 CSPG4P5Q96PW8 444 aa17.71■□□□□ 0.43
TPM1-205ENST00000357980 FRMD8P1Q9BZ68 369 aaPredicted RBP17.71■□□□□ 0.43
TPM1-205ENST00000357980 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.71■□□□□ 0.433e-7■■■□□ 15.3
TPM1-205ENST00000357980 CWC15Q9P013 229 aaKnown RBP17.71■□□□□ 0.43
TPM1-205ENST00000357980 SAE1Q9UBE0 346 aaPredicted RBP17.71■□□□□ 0.43
TPM1-205ENST00000357980 DNPEPQ9ULA0 475 aa17.71■□□□□ 0.43
TPM1-205ENST00000357980 RWDD3Q9Y3V2 267 aa17.71■□□□□ 0.43
TPM1-205ENST00000357980 ARHGEF15O94989 841 aa17.7■□□□□ 0.42
TPM1-205ENST00000357980 ECEL1O95672 775 aa17.7■□□□□ 0.42
TPM1-205ENST00000357980 PECAM1P16284 738 aaPredicted RBP17.7■□□□□ 0.42
TPM1-205ENST00000357980 HMGA1P17096 107 aaKnown RBP17.7■□□□□ 0.42
TPM1-205ENST00000357980 GBP1P32455 592 aa17.7■□□□□ 0.42
TPM1-205ENST00000357980 MAGEA10P43363 369 aaPredicted RBP17.7■□□□□ 0.42
TPM1-205ENST00000357980 OTUD4Q01804 1114 aaKnown RBP17.7■□□□□ 0.42
TPM1-205ENST00000357980 TRADDQ15628 312 aa17.7■□□□□ 0.42
TPM1-205ENST00000357980 OASLQ15646 514 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms