RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 NECTIN3Q9NQS3 549 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 FAM196BA6NMK8 535 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 GSSP48637 474 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 CCT3P49368 545 aaKnown RBP11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 MRPS25P82663 173 aaKnown RBP11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 EFEMP1Q12805 493 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 PRR23BQ6ZRT6 265 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 EXOC3L1Q86VI1 746 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 ACSF2Q96CM8 615 aaPredicted RBP11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 MXD3Q9BW11 206 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 TLR8Q9NR97 1041 aaKnown RBP11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 MAN1B1Q9UKM7 699 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 GSAPA4D1B5 854 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 VAMP4O75379 141 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 KCNA5P22460 613 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 HNRNPH1P31943 449 aaKnown RBP11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 NCOA4Q13772 614 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 USP17L6PQ6QN14 398 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 FAM228AQ86W67 206 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 METTL21AQ8WXB1 218 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 TMEM68Q96MH6 324 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 SENP7Q9BQF6 1050 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 CMTM6Q9NX76 183 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 CARMIL3Q8ND23 1372 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 TSPAN1O60635 241 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 CYP2D6P10635 497 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 TGM2P21980 687 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 CWF19L1Q69YN2 538 aaKnown RBP11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 RBM43Q6ZSC3 357 aaKnown RBP11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 UBP1Q9NZI7 540 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 ATP5BP06576 529 aaKnown RBP11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 ETF1P62495 437 aaKnown RBP11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 TAF5Q15542 800 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 CNPY4Q8N129 248 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 CXorf40AQ8TE69 158 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 HIST1H2AAQ96QV6 131 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 LRRC40Q9H9A6 602 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 DDIT4Q9NX09 232 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 ARHGAP28Q9P2N2 729 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 PFASO15067 1338 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 CCNT2O60583 730 aaKnown RBP11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 KLHL2O95198 593 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 CYP2A6P11509 494 aaPredicted RBP11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 PHKG2P15735 406 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 DNASE1L1P49184 302 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 GTF2A2P52657 109 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 ATXN1P54253 815 aaKnown RBP11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 ATP6AP1LQ52LC2 224 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 QKIQ96PU8 341 aaKnown RBP eCLIP11.81□□□□□ -0.523e-6■■■■□ 21.5
NUDCD3-202ENST00000355451 MNTQ99583 582 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 POLD4Q9HCU8 107 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 SEC31BQ9NQW1 1179 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 TMCO1Q9UM00 188 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 GPC6Q9Y625 555 aaPredicted RBP11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 ZNF879B4DU55 563 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 GCATO75600 419 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 NTSP30990 170 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 IL6STP40189 918 aaPredicted RBP11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 ITGA1P56199 1179 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 POLR2LP62875 67 aaKnown RBP11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 RIN1Q13671 783 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 KNOP1Q1ED39 458 aaKnown RBP11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 RAP1GAP2Q684P5 730 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 FAM81AQ8TBF8 368 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 CNPY3Q9BT09 278 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 KERAO60938 352 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 SERPINA3P01011 423 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 PRKAG1P54619 331 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 TAB1Q15750 504 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 PRPF39Q86UA1 669 aaKnown RBP11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 GULP1Q9UBP9 304 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 SRP68Q9UHB9 627 aaKnown RBP11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 RPAP1Q9BWH6 1393 aaPredicted RBP11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 URADA6NGE7 173 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 SLC26A3P40879 764 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 POTEGQ6S5H5 508 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 EEF1AKMT1Q8WVE0 214 aa11.81□□□□□ -0.52
NUDCD3-202ENST00000355451 GIPC3Q8TF64 312 aa11.8□□□□□ -0.52
NUDCD3-202ENST00000355451 HPDLQ96IR7 371 aa11.8□□□□□ -0.52
NUDCD3-202ENST00000355451 CEP72Q9P209 647 aa11.8□□□□□ -0.52
NUDCD3-202ENST00000355451 URB1O60287 2271 aaKnown RBP11.8□□□□□ -0.52
NUDCD3-202ENST00000355451 PNPLA4P41247 253 aa11.8□□□□□ -0.52
NUDCD3-202ENST00000355451 PPIL2Q13356 520 aa11.8□□□□□ -0.52
NUDCD3-202ENST00000355451 DENND1BQ6P3S1 775 aa11.8□□□□□ -0.52
NUDCD3-202ENST00000355451 SLC24A3Q9HC58 644 aa11.8□□□□□ -0.52
NUDCD3-202ENST00000355451 STK39Q9UEW8 545 aa11.8□□□□□ -0.52
NUDCD3-202ENST00000355451 PCDHA11Q9Y5I1 949 aa11.8□□□□□ -0.52
NUDCD3-202ENST00000355451 USP19O94966 1318 aa11.8□□□□□ -0.52
NUDCD3-202ENST00000355451 ANKDD1BA6NHY2 528 aa11.8□□□□□ -0.52
NUDCD3-202ENST00000355451 RGS14O43566 566 aa11.8□□□□□ -0.52
NUDCD3-202ENST00000355451 RGS20O76081 388 aa11.8□□□□□ -0.52
NUDCD3-202ENST00000355451 ZNF432O94892 652 aa11.8□□□□□ -0.52
NUDCD3-202ENST00000355451 TCEA1P23193 301 aaKnown RBP11.8□□□□□ -0.52
NUDCD3-202ENST00000355451 ADSLP30566 484 aaPredicted RBP11.8□□□□□ -0.52
NUDCD3-202ENST00000355451 ATF7IP2Q5U623 682 aa11.8□□□□□ -0.52
NUDCD3-202ENST00000355451 GPR135Q8IZ08 494 aa11.8□□□□□ -0.52
NUDCD3-202ENST00000355451 CPA5Q8WXQ8 436 aa11.8□□□□□ -0.52
NUDCD3-202ENST00000355451 TRIM36Q9NQ86 728 aa11.8□□□□□ -0.52
NUDCD3-202ENST00000355451 GIT1Q9Y2X7 761 aa11.8□□□□□ -0.52
NUDCD3-202ENST00000355451 PTPN21Q16825 1174 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms