RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 RUFY1Q96T51 708 aa23.73■■□□□ 1.39
SCAMP3-202ENST00000355379 SH3GL2Q99962 352 aa23.73■■□□□ 1.39
SCAMP3-202ENST00000355379 TMEM121Q9BTD3 319 aa23.73■■□□□ 1.39
SCAMP3-202ENST00000355379 TTPALQ9BTX7 342 aa23.73■■□□□ 1.39
SCAMP3-202ENST00000355379 FOXP3Q9BZS1 431 aa23.73■■□□□ 1.39
SCAMP3-202ENST00000355379 FBXW11Q9UKB1 542 aa23.73■■□□□ 1.39
SCAMP3-202ENST00000355379 DNALI1O14645 258 aaPredicted RBP23.72■■□□□ 1.39
SCAMP3-202ENST00000355379 RBP3P10745 1247 aa23.72■■□□□ 1.39
SCAMP3-202ENST00000355379 STIP1P31948 543 aaKnown RBP23.72■■□□□ 1.39
SCAMP3-202ENST00000355379 ADRA1BP35368 520 aa23.72■■□□□ 1.39
SCAMP3-202ENST00000355379 ITGA8P53708 1063 aa23.72■■□□□ 1.39
SCAMP3-202ENST00000355379 YWHAGP61981 247 aaKnown RBP eCLIP23.72■■□□□ 1.39
SCAMP3-202ENST00000355379 CBX1P83916 185 aa23.72■■□□□ 1.39
SCAMP3-202ENST00000355379 EFHC2Q5JST6 749 aa23.72■■□□□ 1.39
SCAMP3-202ENST00000355379 SCAMP5Q8TAC9 235 aa23.72■■□□□ 1.39
SCAMP3-202ENST00000355379 BCL7CQ8WUZ0 217 aaPredicted RBP23.72■■□□□ 1.39
SCAMP3-202ENST00000355379 ZNF689Q96CS4 500 aaPredicted RBP23.72■■□□□ 1.39
SCAMP3-202ENST00000355379 CWC15Q9P013 229 aaKnown RBP23.72■■□□□ 1.39
SCAMP3-202ENST00000355379 SCML2Q9UQR0 700 aa23.72■■□□□ 1.39
SCAMP3-202ENST00000355379 H3BRJ5 948 aa23.71■■□□□ 1.39
SCAMP3-202ENST00000355379 NR2C2P49116 596 aa23.71■■□□□ 1.39
SCAMP3-202ENST00000355379 CXCR3P49682 368 aa23.71■■□□□ 1.39
SCAMP3-202ENST00000355379 CTCFP49711 727 aaPredicted RBP23.71■■□□□ 1.39
SCAMP3-202ENST00000355379 ROR1Q01973 937 aa23.71■■□□□ 1.39
SCAMP3-202ENST00000355379 ARL13BQ3SXY8 428 aa23.71■■□□□ 1.39
SCAMP3-202ENST00000355379 RTP2Q5QGT7 225 aa23.71■■□□□ 1.39
SCAMP3-202ENST00000355379 IZUMO3Q5VZ72 239 aa23.71■■□□□ 1.39
SCAMP3-202ENST00000355379 HIBCHQ6NVY1 386 aaPredicted RBP23.71■■□□□ 1.39
SCAMP3-202ENST00000355379 NPNTQ6UXI9 565 aa23.71■■□□□ 1.39
SCAMP3-202ENST00000355379 TMEM173Q86WV6 379 aaPredicted RBP23.71■■□□□ 1.39
SCAMP3-202ENST00000355379 RNF168Q8IYW5 571 aaPredicted RBP23.71■■□□□ 1.39
SCAMP3-202ENST00000355379 RSAD2Q8WXG1 361 aa23.71■■□□□ 1.39
SCAMP3-202ENST00000355379 TMEM106CQ9BVX2 250 aa23.71■■□□□ 1.39
SCAMP3-202ENST00000355379 FBXO44Q9H4M3 255 aa23.71■■□□□ 1.39
SCAMP3-202ENST00000355379 FAM204AQ9H8W3 233 aa23.71■■□□□ 1.39
SCAMP3-202ENST00000355379 COMMD8Q9NX08 183 aa23.71■■□□□ 1.39
SCAMP3-202ENST00000355379 DDIT4Q9NX09 232 aa23.71■■□□□ 1.39
SCAMP3-202ENST00000355379 IL37Q9NZH6 218 aa23.71■■□□□ 1.39
SCAMP3-202ENST00000355379 CFAP69A5D8W1 941 aa23.7■■□□□ 1.38
SCAMP3-202ENST00000355379 CARNS1A5YM72 827 aa23.7■■□□□ 1.38
SCAMP3-202ENST00000355379 TRIM43BA6NCK2 446 aa23.7■■□□□ 1.38
SCAMP3-202ENST00000355379 IGLV3-25P01717 112 aa23.7■■□□□ 1.38
SCAMP3-202ENST00000355379 RARGP13631 454 aa23.7■■□□□ 1.38
SCAMP3-202ENST00000355379 VPS41P49754 854 aa23.7■■□□□ 1.38
SCAMP3-202ENST00000355379 ZNF135P52742 658 aaPredicted RBP23.7■■□□□ 1.38
SCAMP3-202ENST00000355379 PMS2P54278 862 aa23.7■■□□□ 1.38
SCAMP3-202ENST00000355379 XRCC4Q13426 336 aa23.7■■□□□ 1.38
SCAMP3-202ENST00000355379 P3H1Q32P28 736 aa23.7■■□□□ 1.38
SCAMP3-202ENST00000355379 MFSD5Q6N075 450 aa23.7■■□□□ 1.38
SCAMP3-202ENST00000355379 C1orf228Q6PIY5 440 aa23.7■■□□□ 1.38
SCAMP3-202ENST00000355379 CEP128Q6ZU80 1094 aa23.7■■□□□ 1.38
SCAMP3-202ENST00000355379 TMEM199Q8N511 208 aa23.7■■□□□ 1.38
SCAMP3-202ENST00000355379 GLIS1Q8NBF1 620 aa23.7■■□□□ 1.38
SCAMP3-202ENST00000355379 UBLCP1Q8WVY7 318 aaPredicted RBP23.7■■□□□ 1.38
SCAMP3-202ENST00000355379 EDEM1Q92611 657 aa23.7■■□□□ 1.38
SCAMP3-202ENST00000355379 TRIM43Q96BQ3 446 aaPredicted RBP23.7■■□□□ 1.38
SCAMP3-202ENST00000355379 PKNOX2Q96KN3 472 aa23.7■■□□□ 1.38
SCAMP3-202ENST00000355379 B3GALT6Q96L58 329 aa23.7■■□□□ 1.38
SCAMP3-202ENST00000355379 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.7■■□□□ 1.38
SCAMP3-202ENST00000355379 ATP8A1Q9Y2Q0 1164 aa23.7■■□□□ 1.38
SCAMP3-202ENST00000355379 GREB1Q4ZG55 1949 aa23.7■■□□□ 1.38
SCAMP3-202ENST00000355379 SYNJ2BP-COX16A0A087WUM0 186 aa23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 MTMR11A4FU01 709 aa23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 CPB1P15086 417 aa23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 PBX3P40426 434 aa23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 EIF4EBP2Q13542 120 aaPredicted RBP23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 USP41Q3LFD5 358 aa23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 BTBD8Q5XKL5 378 aa23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 DARS2Q6PI48 645 aaKnown RBP23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 TAS1R1Q7RTX1 841 aa23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 PCGF5Q86SE9 256 aa23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 ARHGAP18Q8N392 663 aa23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 IGSF21Q96ID5 467 aa23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 MAGEB5Q9BZ81 275 aa23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 ADAM7Q9H2U9 754 aa23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 COX16Q9P0S2 106 aa23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 TPX2Q9ULW0 747 aaKnown RBP23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 PLAAQ9Y263 795 aa23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 BACE2Q9Y5Z0 518 aa23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 BCLAF3A2AJT9 711 aaKnown RBP23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 ZSCAN5DPP0CG00 497 aa23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 ETS1P14921 441 aa23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 RAG1P15918 1043 aa23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 GOT1P17174 413 aa23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 ITGB8P26012 769 aa23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 HCAR3P49019 387 aa23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 FAM193AP78312 1265 aa23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 GPS1Q13098 491 aa23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 RSPO2Q6UXX9 243 aaPredicted RBP23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 SCD5Q86SK9 330 aa23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 PRUNE1Q86TP1 453 aa23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 TAC4Q86UU9 113 aa23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 MON1AQ86VX9 555 aa23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 UNC45BQ8IWX7 931 aa23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 CMTR2Q8IYT2 770 aaKnown RBP23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 PYROXD2Q8N2H3 581 aa23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 DQX1Q8TE96 717 aaKnown RBP23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 RNF139Q8WU17 664 aa23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 SPATA17Q96L03 361 aa23.69■■□□□ 1.38
SCAMP3-202ENST00000355379 PABPC3Q9H361 631 aaKnown RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms