RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 ANKRD22Q5VYY1 191 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 DARS2Q6PI48 645 aaKnown RBP7.19□□□□□ -1.26
TRIM55-203ENST00000350034 GLB1LQ6UWU2 654 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 LRRC8DQ7L1W4 858 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 CCDC25Q86WR0 208 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 ZNF280BQ86YH2 543 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 FAM126BQ8IXS8 530 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 SIX6OS1Q8N1H7 587 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 FAM71DQ8N9W8 422 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 RNF169Q8NCN4 708 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.19□□□□□ -1.26
TRIM55-203ENST00000350034 EPS8L3Q8TE67 593 aaKnown RBP7.19□□□□□ -1.26
TRIM55-203ENST00000350034 TTC25Q96NG3 672 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 KCNK16Q96T55 309 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 FTHL17Q9BXU8 183 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 MAGEB5Q9BZ81 275 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.19□□□□□ -1.26
TRIM55-203ENST00000350034 DHX35Q9H5Z1 703 aaKnown RBP7.19□□□□□ -1.26
TRIM55-203ENST00000350034 POPDC2Q9HBU9 364 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 WDR6Q9NNW5 1121 aaKnown RBP7.19□□□□□ -1.26
TRIM55-203ENST00000350034 TMEM161AQ9NX61 479 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 RRN3Q9NYV6 651 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 CWC15Q9P013 229 aaKnown RBP7.19□□□□□ -1.26
TRIM55-203ENST00000350034 KANSL3Q9P2N6 904 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 LGALS13Q9UHV8 139 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 STAP1Q9ULZ2 295 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 INPP5FQ9Y2H2 1132 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 SF3B1O75533 1304 aaKnown RBP eCLIP7.19□□□□□ -1.26
TRIM55-203ENST00000350034 YJEFN3A6XGL0 299 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 HACD1B0YJ81 288 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 KBTBD13C9JR72 458 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 E7ENQ6 273 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 E7EVH7 732 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 H3BRJ5 948 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 H7C0C1 242 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 M0QYT0 321 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 DNM1LO00429 736 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 ENPP3O14638 875 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 CHADO15335 359 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 RGS16O15492 202 aaPredicted RBP7.18□□□□□ -1.26
TRIM55-203ENST00000350034 NBNO60934 754 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 TMEM63AO94886 807 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 ACSL3O95573 720 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 ZBED1O96006 694 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 IGLV3-25P01717 112 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 LTFP02788 710 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 TSHRP16473 764 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 AMPD1P23109 780 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 LSP1P33241 339 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 ADRA1BP35368 520 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 MMP13P45452 471 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 ATP5OP48047 213 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 HCAR3P49019 387 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 ATP1A2P50993 1020 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 ARL4CP56559 192 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 GBE1Q04446 702 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 DEUP1Q05D60 604 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 DPYSQ14117 519 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 MRPL58Q14197 206 aaKnown RBP7.18□□□□□ -1.26
TRIM55-203ENST00000350034 PAN2Q504Q3 1202 aaKnown RBP7.18□□□□□ -1.26
TRIM55-203ENST00000350034 PLEKHG4Q58EX7 1191 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 SLC45A4Q5BKX6 768 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 DNAJC21Q5F1R6 531 aaKnown RBP7.18□□□□□ -1.26
TRIM55-203ENST00000350034 NCBP2-AS2Q69YL0 99 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 OVOS1Q6IE37 1185 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 C1orf228Q6PIY5 440 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 C4orf22Q6V702 233 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 CENPUQ71F23 418 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 FAM131BQ86XD5 332 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 TDRPQ86YL5 185 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 CDKL3Q8IVW4 592 aaPredicted RBP7.18□□□□□ -1.26
TRIM55-203ENST00000350034 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.18□□□□□ -1.26
TRIM55-203ENST00000350034 CRIPAKQ8N1N5 446 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 THEM5Q8N1Q8 247 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 UHMK1Q8TAS1 419 aaKnown RBP7.18□□□□□ -1.26
TRIM55-203ENST00000350034 FAM149B1Q96BN6 582 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 CENPTQ96BT3 561 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 C9orf72Q96LT7 481 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 OLFM3Q96PB7 478 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 QKIQ96PU8 341 aaKnown RBP eCLIP7.18□□□□□ -1.26
TRIM55-203ENST00000350034 TMEM209Q96SK2 561 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 WDR83Q9BRX9 315 aaKnown RBP7.18□□□□□ -1.26
TRIM55-203ENST00000350034 ZCWPW1Q9H0M4 648 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 STMN4Q9H169 189 aaPredicted RBP7.18□□□□□ -1.26
TRIM55-203ENST00000350034 CNOT10Q9H9A5 744 aaKnown RBP7.18□□□□□ -1.26
TRIM55-203ENST00000350034 PPCSQ9HAB8 311 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 SAYSD1Q9NPB0 183 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 DMAP1Q9NPF5 467 aaPredicted RBP7.18□□□□□ -1.26
TRIM55-203ENST00000350034 PAK6Q9NQU5 681 aaPredicted RBP7.18□□□□□ -1.26
TRIM55-203ENST00000350034 PIGVQ9NUD9 493 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 TBC1D13Q9NVG8 400 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 DNAJC17Q9NVM6 304 aaKnown RBP7.18□□□□□ -1.26
TRIM55-203ENST00000350034 PAK5Q9P286 719 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 NAALADL1Q9UQQ1 740 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 CLUHO75153 1309 aa7.18□□□□□ -1.26
TRIM55-203ENST00000350034 A0A087WUV0 522 aaPredicted RBP7.17□□□□□ -1.26
TRIM55-203ENST00000350034 TCRBV7S3A2A0A539 114 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 TLDC2A0PJX2 215 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 C5orf60A6NFR6 353 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 F8W810 466 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms