RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 GUCY2DQ02846 1103 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 GALNT3Q14435 633 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 ZNF827Q17R98 1081 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 TMEM177Q53S58 311 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 C1orf94Q6P1W5 598 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 GPAT4Q86UL3 456 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 TP53INP2Q8IXH6 220 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 UBE2J2Q8N2K1 259 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 RSPH1Q8WYR4 309 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 KAT2BQ92831 832 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 LINGO1Q96FE5 620 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 RPRD1AQ96P16 312 aaPredicted RBP6.18□□□□□ -1.42
RFC1-201ENST00000349703 VCX3BQ9H321 246 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 SUGCTQ9HAC7 445 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 VCX3AQ9NNX9 186 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 WDR17Q8IZU2 1322 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 IGSF1Q8N6C5 1336 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 A0A0G2JPF8 293 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 A0A1W2PRV1 198 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 CD1AP06126 327 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 MYBL1P10243 752 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 GRM5P41594 1212 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 DNA2P51530 1060 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 HERVK_113P62684 666 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 ERVK-24P63145 666 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 PIGFQ07326 219 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 CACNB2Q08289 660 aaPredicted RBP6.18□□□□□ -1.42
RFC1-201ENST00000349703 LCP2Q13094 533 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 MTF1Q14872 753 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 SLC9C1Q4G0N8 1177 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 PITRM1Q5JRX3 1037 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 DEPDC1Q5TB30 811 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 CFAP161Q6P656 301 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 LVRNQ6Q4G3 990 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 KNDC1Q76NI1 1749 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 NOA1Q8NC60 698 aaKnown RBP6.18□□□□□ -1.42
RFC1-201ENST00000349703 BEST2Q8NFU1 509 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 TEKT4Q8WW24 435 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 STMN2Q93045 179 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 FATE1Q969F0 183 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 KIAA1191Q96A73 305 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 KLHL29Q96CT2 875 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 MAELQ96JY0 434 aaKnown RBP6.18□□□□□ -1.42
RFC1-201ENST00000349703 KCNN2Q9H2S1 579 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 RIBC2Q9H4K1 309 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 SRA1Q9HD15 236 aaKnown RBP6.18□□□□□ -1.42
RFC1-201ENST00000349703 SHOC2Q9UQ13 582 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 A2ML1A8K2U0 1454 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 PTPRMP28827 1452 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 FAM237BA0A1B0GVD1 139 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 CCDC169A6NNP5 214 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 TLR2O60603 784 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 LMNAP02545 664 aaKnown RBP6.18□□□□□ -1.42
RFC1-201ENST00000349703 MTHFD1P11586 935 aaKnown RBP6.18□□□□□ -1.42
RFC1-201ENST00000349703 AZGP1P25311 298 aaKnown RBP6.18□□□□□ -1.42
RFC1-201ENST00000349703 CALML3P27482 149 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 GRK6P43250 576 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 MRPS9P82933 396 aaKnown RBP6.18□□□□□ -1.42
RFC1-201ENST00000349703 FGL1Q08830 312 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 ZC2HC1CQ53FD0 456 aaPredicted RBP6.18□□□□□ -1.42
RFC1-201ENST00000349703 TCP11X2Q5H9J9 407 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 SLC9C2Q5TAH2 1124 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 PAPD7Q5XG87 772 aaKnown RBP6.18□□□□□ -1.42
RFC1-201ENST00000349703 ATG16L1Q676U5 607 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 CYFIP1Q7L576 1253 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 SH3RF1Q7Z6J0 888 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 CSGALNACT2Q8N6G5 542 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.18□□□□□ -1.42
RFC1-201ENST00000349703 FIG4Q92562 907 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 CAVIN3Q969G5 261 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 TBC1D20Q96BZ9 403 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 MMS19Q96T76 1030 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 RAB34Q9BZG1 259 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 TPSD1Q9BZJ3 242 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 RNF208Q9H0X6 261 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 EMC7Q9NPA0 242 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 TOPORSQ9NS56 1045 aaPredicted RBP6.18□□□□□ -1.42
RFC1-201ENST00000349703 PLEKHG1Q9ULL1 1385 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 UBN2Q6ZU65 1347 aa6.18□□□□□ -1.42
RFC1-201ENST00000349703 LRRC14BA6NHZ5 514 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 IDH1O75874 414 aaKnown RBP6.17□□□□□ -1.42
RFC1-201ENST00000349703 KRT33AO76009 404 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 BEST1O76090 585 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 UQCRFS1P1P0C7P4 283 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 GALCP54803 685 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 RPS3AP61247 264 aaKnown RBP6.17□□□□□ -1.42
RFC1-201ENST00000349703 RPS26P62854 115 aaKnown RBP6.17□□□□□ -1.42
RFC1-201ENST00000349703 MYO1EQ12965 1108 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 FLOT2Q14254 428 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 PROSER3Q2NL68 480 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 ZNF658Q5TYW1 1059 aaPredicted RBP6.17□□□□□ -1.42
RFC1-201ENST00000349703 SHC4Q6S5L8 630 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 VWA5B2Q8N398 1253 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 RPL10LQ96L21 214 aaKnown RBP6.17□□□□□ -1.42
RFC1-201ENST00000349703 ADAM7Q9H2U9 754 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 MAGEF1Q9HAY2 307 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 EPB41L5Q9HCM4 733 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 DISC1Q9NRI5 854 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 ETAA1Q9NY74 926 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 H2AFY2Q9P0M6 372 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 5.7 ms