RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 VIMP08670 466 aaKnown RBP21.12■□□□□ 0.97
CHRNA3-202ENST00000348639 ATP2A2P16615 1042 aaKnown RBP21.12■□□□□ 0.97
CHRNA3-202ENST00000348639 CST5P28325 142 aaPredicted RBP21.12■□□□□ 0.97
CHRNA3-202ENST00000348639 ARL4AP40617 200 aa21.12■□□□□ 0.97
CHRNA3-202ENST00000348639 MAGEA6P43360 314 aa21.12■□□□□ 0.97
CHRNA3-202ENST00000348639 KLHL38Q2WGJ6 581 aa21.12■□□□□ 0.97
CHRNA3-202ENST00000348639 PIGWQ7Z7B1 504 aa21.12■□□□□ 0.97
CHRNA3-202ENST00000348639 FAM35AQ86V20 835 aa21.12■□□□□ 0.97
CHRNA3-202ENST00000348639 PCSK9Q8NBP7 692 aaKnown RBP21.12■□□□□ 0.97
CHRNA3-202ENST00000348639 CKAP2Q8WWK9 683 aa21.12■□□□□ 0.97
CHRNA3-202ENST00000348639 PCED1BQ96HM7 432 aa21.12■□□□□ 0.97
CHRNA3-202ENST00000348639 PAAF1Q9BRP4 392 aa21.12■□□□□ 0.97
CHRNA3-202ENST00000348639 KLC2Q9H0B6 622 aa21.12■□□□□ 0.97
CHRNA3-202ENST00000348639 POPDC2Q9HBU9 364 aa21.12■□□□□ 0.97
CHRNA3-202ENST00000348639 MYBPHLA2RUH7 354 aa21.11■□□□□ 0.97
CHRNA3-202ENST00000348639 TRIM66O15016 1216 aa21.11■□□□□ 0.97
CHRNA3-202ENST00000348639 ITGA7Q13683 1181 aa21.11■□□□□ 0.97
CHRNA3-202ENST00000348639 DSC3Q14574 896 aa21.11■□□□□ 0.97
CHRNA3-202ENST00000348639 PKN2Q16513 984 aaKnown RBP21.11■□□□□ 0.97
CHRNA3-202ENST00000348639 NCBP2-AS2Q69YL0 99 aa21.11■□□□□ 0.97
CHRNA3-202ENST00000348639 OTUD6BQ8N6M0 293 aa21.11■□□□□ 0.97
CHRNA3-202ENST00000348639 FBF1Q8TES7 1133 aa21.11■□□□□ 0.97
CHRNA3-202ENST00000348639 NSRP1Q9H0G5 558 aaKnown RBP21.11■□□□□ 0.97
CHRNA3-202ENST00000348639 ETNK2Q9NVF9 386 aa21.11■□□□□ 0.97
CHRNA3-202ENST00000348639 PTCH2Q9Y6C5 1203 aa21.11■□□□□ 0.97
CHRNA3-202ENST00000348639 TEX264Q9Y6I9 313 aa21.11■□□□□ 0.97
CHRNA3-202ENST00000348639 FAM47DPA6NHR8 397 aa21.11■□□□□ 0.97
CHRNA3-202ENST00000348639 GCATO75600 419 aa21.11■□□□□ 0.97
CHRNA3-202ENST00000348639 AP1G2O75843 785 aa21.11■□□□□ 0.97
CHRNA3-202ENST00000348639 POMCP01189 267 aa21.11■□□□□ 0.97
CHRNA3-202ENST00000348639 GOT1P17174 413 aa21.11■□□□□ 0.97
CHRNA3-202ENST00000348639 KRT15P19012 456 aa21.11■□□□□ 0.97
CHRNA3-202ENST00000348639 ELK3P41970 407 aa21.11■□□□□ 0.97
CHRNA3-202ENST00000348639 PITX1P78337 314 aaPredicted RBP21.11■□□□□ 0.97
CHRNA3-202ENST00000348639 C10orf67Q8IYJ2 551 aa21.11■□□□□ 0.97
CHRNA3-202ENST00000348639 PYROXD2Q8N2H3 581 aa21.11■□□□□ 0.97
CHRNA3-202ENST00000348639 SGSM3Q96HU1 749 aa21.11■□□□□ 0.97
CHRNA3-202ENST00000348639 QKIQ96PU8 341 aaKnown RBP eCLIP21.11■□□□□ 0.97
CHRNA3-202ENST00000348639 SMOQ99835 787 aa21.11■□□□□ 0.97
CHRNA3-202ENST00000348639 DHRS4Q9BTZ2 278 aa21.11■□□□□ 0.97
CHRNA3-202ENST00000348639 TRABDQ9H4I3 376 aa21.11■□□□□ 0.97
CHRNA3-202ENST00000348639 DTLQ9NZJ0 730 aa21.11■□□□□ 0.97
CHRNA3-202ENST00000348639 A0A0U1RQF3 1178 aa21.1■□□□□ 0.97
CHRNA3-202ENST00000348639 M0QYT0 321 aa21.1■□□□□ 0.97
CHRNA3-202ENST00000348639 PRPF4O43172 522 aaKnown RBP eCLIP21.1■□□□□ 0.97
CHRNA3-202ENST00000348639 AMPD1P23109 780 aa21.1■□□□□ 0.97
CHRNA3-202ENST00000348639 PCSK1P29120 753 aa21.1■□□□□ 0.97
CHRNA3-202ENST00000348639 SLC18A1P54219 525 aa21.1■□□□□ 0.97
CHRNA3-202ENST00000348639 MTM1Q13496 603 aa21.1■□□□□ 0.97
CHRNA3-202ENST00000348639 LPIN1Q14693 890 aa21.1■□□□□ 0.97
CHRNA3-202ENST00000348639 TIGD5Q53EQ6 642 aa21.1■□□□□ 0.97
CHRNA3-202ENST00000348639 RAB41Q5JT25 222 aa21.1■□□□□ 0.97
CHRNA3-202ENST00000348639 ADGRD1Q6QNK2 874 aa21.1■□□□□ 0.97
CHRNA3-202ENST00000348639 KCNT2Q6UVM3 1135 aa21.1■□□□□ 0.97
CHRNA3-202ENST00000348639 TAX1BP1Q86VP1 789 aa21.1■□□□□ 0.97
CHRNA3-202ENST00000348639 IGDCC3Q8IVU1 814 aa21.1■□□□□ 0.97
CHRNA3-202ENST00000348639 ADAM2Q99965 735 aa21.1■□□□□ 0.97
CHRNA3-202ENST00000348639 ULBP1Q9BZM6 244 aa21.1■□□□□ 0.97
CHRNA3-202ENST00000348639 CHMP2BQ9UQN3 213 aa21.1■□□□□ 0.97
CHRNA3-202ENST00000348639 CASP8AP2Q9UKL3 1982 aa21.1■□□□□ 0.97
CHRNA3-202ENST00000348639 MAGEA9P43362 315 aa21.09■□□□□ 0.97
CHRNA3-202ENST00000348639 DAOAP59103 153 aa21.09■□□□□ 0.97
CHRNA3-202ENST00000348639 PAN2Q504Q3 1202 aaKnown RBP21.09■□□□□ 0.97
CHRNA3-202ENST00000348639 SYPL2Q5VXT5 272 aa21.09■□□□□ 0.97
CHRNA3-202ENST00000348639 HFE2Q6ZVN8 426 aa21.09■□□□□ 0.97
CHRNA3-202ENST00000348639 BZW1Q7L1Q6 419 aaKnown RBP21.09■□□□□ 0.97
CHRNA3-202ENST00000348639 RNF180Q86T96 592 aa21.09■□□□□ 0.97
CHRNA3-202ENST00000348639 CCDC197Q8NCU1 140 aa21.09■□□□□ 0.97
CHRNA3-202ENST00000348639 CCDC110Q8TBZ0 833 aa21.09■□□□□ 0.97
CHRNA3-202ENST00000348639 CAPNS2Q96L46 248 aa21.09■□□□□ 0.97
CHRNA3-202ENST00000348639 MLXIPLQ9NP71 852 aa21.09■□□□□ 0.97
CHRNA3-202ENST00000348639 CNGB3Q9NQW8 809 aa21.09■□□□□ 0.97
CHRNA3-202ENST00000348639 SAMD15Q9P1V8 674 aa21.09■□□□□ 0.97
CHRNA3-202ENST00000348639 NRP1O14786 923 aa21.09■□□□□ 0.97
CHRNA3-202ENST00000348639 SPAG6O75602 509 aa21.09■□□□□ 0.97
CHRNA3-202ENST00000348639 ODC1P11926 461 aa21.09■□□□□ 0.97
CHRNA3-202ENST00000348639 STX2P32856 288 aa21.09■□□□□ 0.97
CHRNA3-202ENST00000348639 PTK7Q13308 1070 aa21.09■□□□□ 0.97
CHRNA3-202ENST00000348639 SYCP2LQ5T4T6 812 aa21.09■□□□□ 0.97
CHRNA3-202ENST00000348639 ZMIZ2Q8NF64 920 aa21.09■□□□□ 0.97
CHRNA3-202ENST00000348639 LRRN4Q8WUT4 740 aa21.09■□□□□ 0.97
CHRNA3-202ENST00000348639 OLFM3Q96PB7 478 aa21.09■□□□□ 0.97
CHRNA3-202ENST00000348639 SMC6Q96SB8 1091 aa21.09■□□□□ 0.97
CHRNA3-202ENST00000348639 KCNK16Q96T55 309 aa21.09■□□□□ 0.97
CHRNA3-202ENST00000348639 PAFAH2Q99487 392 aa21.09■□□□□ 0.97
CHRNA3-202ENST00000348639 ETNK1Q9HBU6 452 aa21.09■□□□□ 0.97
CHRNA3-202ENST00000348639 ARHGEF4Q9NR80 690 aa21.09■□□□□ 0.97
CHRNA3-202ENST00000348639 SRRDQ9UH36 339 aa21.09■□□□□ 0.97
CHRNA3-202ENST00000348639 SMG5Q9UPR3 1016 aaKnown RBP21.09■□□□□ 0.97
CHRNA3-202ENST00000348639 INPP5FQ9Y2H2 1132 aa21.09■□□□□ 0.97
CHRNA3-202ENST00000348639 HACD1B0YJ81 288 aa21.08■□□□□ 0.97
CHRNA3-202ENST00000348639 TCP11X1B4DZS4 312 aa21.08■□□□□ 0.97
CHRNA3-202ENST00000348639 H3BRJ5 948 aa21.08■□□□□ 0.97
CHRNA3-202ENST00000348639 I3L4J1 428 aa21.08■□□□□ 0.97
CHRNA3-202ENST00000348639 TRPA1O75762 1119 aa21.08■□□□□ 0.97
CHRNA3-202ENST00000348639 DGKIO75912 1065 aa21.08■□□□□ 0.97
CHRNA3-202ENST00000348639 FYNP06241 537 aa21.08■□□□□ 0.97
CHRNA3-202ENST00000348639 RABGGTBP53611 331 aa21.08■□□□□ 0.97
CHRNA3-202ENST00000348639 DEUP1Q05D60 604 aa21.08■□□□□ 0.97
CHRNA3-202ENST00000348639 EFTUD2Q15029 972 aaKnown RBP eCLIP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms