RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 GRHL1Q9NZI5 618 aa22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 CDY1Q9Y6F8 540 aa22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 MRPL42Q9Y6G3 142 aaKnown RBP22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 HAPLN1P10915 354 aaPredicted RBP22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 ZFXP17010 805 aaPredicted RBP22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 ARL4AP40617 200 aa22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 GPR15P49685 360 aa22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 MGAT5BQ3V5L5 792 aa22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 EFHC2Q5JST6 749 aa22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 SLC9A4Q6AI14 798 aa22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 ARHGAP18Q8N392 663 aa22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 ALLCQ8N6M5 410 aa22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 TTC9BQ8N6N2 239 aa22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 PCDH19Q8TAB3 1148 aa22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 ADAM32Q8TC27 787 aa22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 P3H4Q92791 437 aa22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 SPATA17Q96L03 361 aa22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 HERC2P3Q9BVR0 1158 aa22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 ACBD3Q9H3P7 528 aa22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 PRDM16Q9HAZ2 1276 aa22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 WDR6Q9NNW5 1121 aaKnown RBP22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 PRDM10Q9NQV6 1147 aa22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 ZDHHC18Q9NUE0 388 aa22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 COMMD8Q9NX08 183 aa22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.31■■□□□ 1.161e-9■□□□□ 11
TSPAN3-202ENST00000346495 SPG21Q9NZD8 308 aa22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 IL37Q9NZH6 218 aa22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 WHRNQ9P202 907 aa22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 FBXW11Q9UKB1 542 aa22.31■■□□□ 1.16
TSPAN3-202ENST00000346495 ALPK3Q96L96 1907 aa22.3■■□□□ 1.16
TSPAN3-202ENST00000346495 MCF2LO15068 1137 aa22.3■■□□□ 1.16
TSPAN3-202ENST00000346495 RTN3O95197 1032 aaPredicted RBP22.3■■□□□ 1.16
TSPAN3-202ENST00000346495 KRT14P02533 472 aa22.3■■□□□ 1.16
TSPAN3-202ENST00000346495 FGBP02675 491 aa22.3■■□□□ 1.16
TSPAN3-202ENST00000346495 ADRA1BP35368 520 aa22.3■■□□□ 1.16
TSPAN3-202ENST00000346495 RPL10AP62906 217 aaKnown RBP22.3■■□□□ 1.16
TSPAN3-202ENST00000346495 SCAPQ12770 1279 aa22.3■■□□□ 1.16
TSPAN3-202ENST00000346495 CALCOCO2Q13137 446 aa22.3■■□□□ 1.16
TSPAN3-202ENST00000346495 NOMO1Q15155 1222 aa22.3■■□□□ 1.16
TSPAN3-202ENST00000346495 ARL13BQ3SXY8 428 aa22.3■■□□□ 1.16
TSPAN3-202ENST00000346495 SDHAF4Q5VUM1 108 aa22.3■■□□□ 1.16
TSPAN3-202ENST00000346495 MON1AQ86VX9 555 aa22.3■■□□□ 1.16
TSPAN3-202ENST00000346495 MREGQ8N565 214 aa22.3■■□□□ 1.16
TSPAN3-202ENST00000346495 PQLC3Q8N755 202 aa22.3■■□□□ 1.16
TSPAN3-202ENST00000346495 DQX1Q8TE96 717 aaKnown RBP22.3■■□□□ 1.16
TSPAN3-202ENST00000346495 FMO2Q99518 471 aa22.3■■□□□ 1.16
TSPAN3-202ENST00000346495 SAE1Q9UBE0 346 aaPredicted RBP22.3■■□□□ 1.16
TSPAN3-202ENST00000346495 VNN2O95498 520 aa22.29■■□□□ 1.16
TSPAN3-202ENST00000346495 ATF2P15336 505 aa22.29■■□□□ 1.16
TSPAN3-202ENST00000346495 PECAM1P16284 738 aaPredicted RBP22.29■■□□□ 1.16
TSPAN3-202ENST00000346495 CXCR3P49682 368 aa22.29■■□□□ 1.16
TSPAN3-202ENST00000346495 EIF3EP60228 445 aaKnown RBP22.29■■□□□ 1.16
TSPAN3-202ENST00000346495 FPGSQ05932 587 aa22.29■■□□□ 1.16
TSPAN3-202ENST00000346495 ZDHHC24Q6UX98 284 aa22.29■■□□□ 1.16
TSPAN3-202ENST00000346495 SCD5Q86SK9 330 aa22.29■■□□□ 1.16
TSPAN3-202ENST00000346495 TAC4Q86UU9 113 aa22.29■■□□□ 1.16
TSPAN3-202ENST00000346495 PLD5Q8N7P1 536 aa22.29■■□□□ 1.16
TSPAN3-202ENST00000346495 BBOF1Q8ND07 529 aa22.29■■□□□ 1.16
TSPAN3-202ENST00000346495 SNF8Q96H20 258 aa22.29■■□□□ 1.16
TSPAN3-202ENST00000346495 CSPG4P5Q96PW8 444 aa22.29■■□□□ 1.16
TSPAN3-202ENST00000346495 SEPT5Q99719 369 aaPredicted RBP22.29■■□□□ 1.16
TSPAN3-202ENST00000346495 TMEM51Q9NW97 253 aa22.29■■□□□ 1.16
TSPAN3-202ENST00000346495 FAM53CQ9NYF3 392 aa22.29■■□□□ 1.16
TSPAN3-202ENST00000346495 SLC27A5Q9Y2P5 690 aa22.29■■□□□ 1.16
TSPAN3-202ENST00000346495 ZBBXA8MT70 800 aa22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 H3BRJ5 948 aa22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 ITIH2P19823 946 aa22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 KLRC2P26717 231 aa22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 GLUD2P49448 558 aa22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 PLTPP55058 493 aa22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 ROR1Q01973 937 aa22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 DSG1Q02413 1049 aa22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 TRIP13Q15645 432 aaPredicted RBP22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 DENND5BQ6ZUT9 1274 aa22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 C16orf59Q7L2K0 433 aa22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 ART4Q93070 314 aa22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 LRRC45Q96CN5 670 aa22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 CEP295NLQ96MC4 621 aa22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 WDCPQ9H6R7 721 aa22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 AAASQ9NRG9 546 aa22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 CWC15Q9P013 229 aaKnown RBP22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 MTRF1LQ9UGC7 380 aaKnown RBP22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 HPCAL4Q9UM19 191 aa22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 KIAA1671Q9BY89 1806 aa22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 A0A1W2PQH9 124 aa22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 WDR27A2RRH5 827 aa22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 SGK1O00141 431 aa22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 IGLV3-25P01717 112 aa22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 YWHAQP27348 245 aa22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 OR1D2P34982 312 aa22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 PPM1AP35813 382 aa22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 ADCY8P40145 1251 aa22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 DUSP4Q13115 394 aa22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 C1orf228Q6PIY5 440 aa22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 NPNTQ6UXI9 565 aa22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 DDX53Q86TM3 631 aaKnown RBP22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 PYROXD2Q8N2H3 581 aa22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 RNF139Q8WU17 664 aa22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 BADQ92934 168 aa22.28■■□□□ 1.16
TSPAN3-202ENST00000346495 TMEM121Q9BTD3 319 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms