RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 GPR158Q5T848 1215 aa16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 ING5Q8WYH8 240 aa16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 PCDHGB4Q9UN71 923 aa16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 RHOBTB1O94844 696 aa16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 ITGALP20701 1170 aa16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 CSE1LP55060 971 aaKnown RBP16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 BMT2Q1RMZ1 405 aa16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 CNKSR3Q6P9H4 555 aa16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 C17orf99Q6UX52 265 aa16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 FLCNQ8NFG4 579 aa16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 MYLPFQ96A32 169 aa16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 TSEN34Q9BSV6 310 aaKnown RBP16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 EIF2AQ9BY44 585 aaKnown RBP16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 AVENQ9NQS1 362 aaPredicted RBP16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 SMG5Q9UPR3 1016 aaKnown RBP16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 A0A0G2JND7 137 aa16.91■□□□□ 0.3
SMARCA4-201ENST00000344626 SNAI1O95863 264 aaPredicted RBP16.91■□□□□ 0.3
SMARCA4-201ENST00000344626 B3GALNT2Q8NCR0 500 aa16.91■□□□□ 0.3
SMARCA4-201ENST00000344626 RNF217Q8TC41 542 aa16.91■□□□□ 0.3
SMARCA4-201ENST00000344626 BADQ92934 168 aa16.91■□□□□ 0.3
SMARCA4-201ENST00000344626 OSGEPL1Q9H4B0 414 aa16.91■□□□□ 0.3
SMARCA4-201ENST00000344626 NDUFS2O75306 463 aa16.91■□□□□ 0.3
SMARCA4-201ENST00000344626 CDH16O75309 829 aa16.91■□□□□ 0.3
SMARCA4-201ENST00000344626 ITGA8P53708 1063 aa16.91■□□□□ 0.3
SMARCA4-201ENST00000344626 PURAQ00577 322 aaKnown RBP16.91■□□□□ 0.3
SMARCA4-201ENST00000344626 COL9A3Q14050 684 aaPredicted RBP16.91■□□□□ 0.3
SMARCA4-201ENST00000344626 NAT9Q9BTE0 207 aa16.91■□□□□ 0.3
SMARCA4-201ENST00000344626 GOLGA4Q13439 2230 aaKnown RBP16.91■□□□□ 0.3
SMARCA4-201ENST00000344626 ASTN1O14525 1302 aa16.91■□□□□ 0.3
SMARCA4-201ENST00000344626 MAGEA4P43358 317 aa16.91■□□□□ 0.3
SMARCA4-201ENST00000344626 PPP2R2AP63151 447 aa16.91■□□□□ 0.3
SMARCA4-201ENST00000344626 MTM1Q13496 603 aa16.91■□□□□ 0.3
SMARCA4-201ENST00000344626 CBWD6Q4V339 395 aa16.91■□□□□ 0.3
SMARCA4-201ENST00000344626 CBWD3Q5JTY5 395 aa16.91■□□□□ 0.3
SMARCA4-201ENST00000344626 CBWD5Q5RIA9 395 aa16.91■□□□□ 0.3
SMARCA4-201ENST00000344626 DDIASQ8IXT1 998 aa16.91■□□□□ 0.3
SMARCA4-201ENST00000344626 GSPT2Q8IYD1 628 aaKnown RBP16.91■□□□□ 0.3
SMARCA4-201ENST00000344626 ADRB2P07550 413 aa16.91■□□□□ 0.3
SMARCA4-201ENST00000344626 NOS2P35228 1153 aa16.91■□□□□ 0.3
SMARCA4-201ENST00000344626 GLIS3Q8NEA6 775 aa16.91■□□□□ 0.3
SMARCA4-201ENST00000344626 NFKBIZQ9BYH8 718 aa16.91■□□□□ 0.3
SMARCA4-201ENST00000344626 RBM12Q9NTZ6 932 aaKnown RBP16.91■□□□□ 0.3
SMARCA4-201ENST00000344626 TMEM161AQ9NX61 479 aa16.91■□□□□ 0.3
SMARCA4-201ENST00000344626 PPARGC1AQ9UBK2 798 aaKnown RBP16.91■□□□□ 0.3
SMARCA4-201ENST00000344626 CHKAP35790 457 aa16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 OTUD4Q01804 1114 aaKnown RBP16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 C3orf62Q6ZUJ4 267 aa16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 UPF3AQ9H1J1 476 aaKnown RBP16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 MRPL40Q9NQ50 206 aaKnown RBP16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 CD274Q9NZQ7 290 aa16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 DOT1LQ8TEK3 1739 aa16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 IGSF6O95976 241 aa16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 CDC25CP30307 473 aa16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 MORF4L2Q15014 288 aa16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 NUP93Q8N1F7 819 aa16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 C3orf20Q8ND61 904 aa16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 OR5B17Q8NGF7 314 aa16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 RSPH1Q8WYR4 309 aa16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 TNFRSF25Q93038 417 aa16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 PPWD1Q96BP3 646 aaKnown RBP16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 CELF6Q96J87 481 aaKnown RBP16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 NT5MQ9NPB1 228 aa16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 CASS4Q9NQ75 786 aa16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 VANGL2Q9ULK5 521 aa16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 L3MBTL1Q9Y468 752 aa16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 CCDC195A0A1B0GUA6 201 aa16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 PPP3CAQ08209 521 aa16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 SPPL2BQ8TCT7 592 aa16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 COG1Q8WTW3 980 aa16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 FAM84AQ96KN4 292 aa16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 BBS2Q9BXC9 721 aa16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 TRABDQ9H4I3 376 aa16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 NDRG2Q9UN36 371 aaKnown RBP16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 JCHAINP01591 159 aa16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 SERPINF2P08697 491 aa16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 IFT88Q13099 833 aa16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 IL17AQ16552 155 aa16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 FBXO38Q6PIJ6 1188 aa16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 FOXR2Q6PJQ5 311 aa16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 C12orf56Q8IXR9 622 aa16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 COL1A1P02452 1464 aaPredicted RBP16.9■□□□□ 0.3
SMARCA4-201ENST00000344626 CFLARO15519 480 aa16.89■□□□□ 0.3
SMARCA4-201ENST00000344626 OMDQ99983 421 aa16.89■□□□□ 0.3
SMARCA4-201ENST00000344626 TUBGCP4Q9UGJ1 667 aa16.89■□□□□ 0.3
SMARCA4-201ENST00000344626 SNRPAP09012 282 aaKnown RBP16.89■□□□□ 0.29
SMARCA4-201ENST00000344626 NR2C2P49116 596 aa16.89■□□□□ 0.29
SMARCA4-201ENST00000344626 C4BP0C0L5 1744 aa16.89■□□□□ 0.29
SMARCA4-201ENST00000344626 RBAK-RBAKDNI3L0D1 243 aa16.89■□□□□ 0.29
SMARCA4-201ENST00000344626 AGTP01019 485 aa16.89■□□□□ 0.29
SMARCA4-201ENST00000344626 KCNJ1P48048 391 aa16.89■□□□□ 0.29
SMARCA4-201ENST00000344626 NFIL3Q16649 462 aa16.89■□□□□ 0.29
SMARCA4-201ENST00000344626 ANKRD20A4Q4UJ75 823 aa16.89■□□□□ 0.29
SMARCA4-201ENST00000344626 ANKRD20A8PQ5CZ79 823 aa16.89■□□□□ 0.29
SMARCA4-201ENST00000344626 ANKRD20A2Q5SQ80 823 aa16.89■□□□□ 0.29
SMARCA4-201ENST00000344626 ANKRD20A1Q5TYW2 823 aa16.89■□□□□ 0.29
SMARCA4-201ENST00000344626 ZIC5Q96T25 663 aa16.89■□□□□ 0.29
SMARCA4-201ENST00000344626 MCOLN1Q9GZU1 580 aa16.89■□□□□ 0.29
SMARCA4-201ENST00000344626 TRMT6Q9UJA5 497 aaKnown RBP16.89■□□□□ 0.29
SMARCA4-201ENST00000344626 SDR42E2A6NKP2 422 aa16.89■□□□□ 0.29
SMARCA4-201ENST00000344626 GGCXP38435 758 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms