RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 PLXND1Q9Y4D7 1925 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 EML1O00423 815 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 ATP9BO43861 1147 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 HS6ST1O60243 411 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 VPS4BO75351 444 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 NR3C1P04150 777 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 GTF2IP78347 998 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 PPARAQ07869 468 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 MTERF2Q49AM1 385 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 ALFQ53S48 1182 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 AGAP9Q5VTM2 703 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 PHC2Q8IXK0 858 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 NUDT16Q96DE0 195 aaKnown RBP6.32□□□□□ -1.4
VCAN-203ENST00000343200 CCDC86Q9H6F5 360 aaKnown RBP6.32□□□□□ -1.4
VCAN-203ENST00000343200 E9PCH4 1651 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 INPP4BO15327 924 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 NCK2O43639 380 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 TFE3P19532 575 aaPredicted RBP6.32□□□□□ -1.4
VCAN-203ENST00000343200 TRIM23P36406 574 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 RGS7P49802 495 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 MAZP56270 477 aaKnown RBP6.32□□□□□ -1.4
VCAN-203ENST00000343200 IL18Q14116 193 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 ZBTB6Q15916 424 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 RNF219Q5W0B1 726 aaPredicted RBP6.32□□□□□ -1.4
VCAN-203ENST00000343200 GALNT15Q8N3T1 639 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 AADATQ8N5Z0 425 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 SSX3Q99909 188 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 HEMGNQ9BXL5 484 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 ZNF717Q9BY31 904 aaPredicted RBP6.32□□□□□ -1.4
VCAN-203ENST00000343200 IRF2BPLQ9H1B7 796 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 KMT5AQ9NQR1 393 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 SEPT9Q9UHD8 586 aaPredicted RBP6.32□□□□□ -1.4
VCAN-203ENST00000343200 TMEM5Q9Y2B1 443 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 SH3TC1Q8TE82 1336 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 TET1Q8NFU7 2136 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 BCLAF3A2AJT9 711 aaKnown RBP6.32□□□□□ -1.4
VCAN-203ENST00000343200 PIGHQ14442 188 aaPredicted RBP6.32□□□□□ -1.4
VCAN-203ENST00000343200 ZMYND11Q15326 602 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 CLEC16AQ2KHT3 1053 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 ZNF699Q32M78 642 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 SNRNP48Q6IEG0 339 aaKnown RBP6.32□□□□□ -1.4
VCAN-203ENST00000343200 SLC22A9Q8IVM8 553 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 MMGT1Q8N4V1 131 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 LSM14AQ8ND56 463 aaKnown RBP6.32□□□□□ -1.4
VCAN-203ENST00000343200 PIK3R3Q92569 461 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 CHRAC1Q9NRG0 131 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 CD274Q9NZQ7 290 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 RAB26Q9ULW5 256 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 AP3M1Q9Y2T2 418 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 CCRL2O00421 344 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 AP3D1O14617 1153 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 CFBP00751 764 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 FGFR3P22607 806 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 SOAT1P35610 550 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 CTDSPL2Q05D32 466 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 PTK6Q13882 451 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 NAA30Q147X3 362 aaPredicted RBP6.32□□□□□ -1.4
VCAN-203ENST00000343200 SSX2Q16385 188 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 SLC18A3Q16572 532 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 COBLL1Q53SF7 1204 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 C4orf22Q6V702 233 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 PNO1Q9NRX1 252 aaKnown RBP6.32□□□□□ -1.4
VCAN-203ENST00000343200 NDFIP2Q9NV92 336 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 TRPC4Q9UBN4 977 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 RAB23Q9ULC3 237 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 PCDHB8Q9UN66 801 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 TDRKHQ9Y2W6 561 aaKnown RBP6.32□□□□□ -1.4
VCAN-203ENST00000343200 RGS4P49798 205 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 TRIM32Q13049 653 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 C4orf46Q504U0 113 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 LRRC24Q50LG9 513 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 OTUD7BQ6GQQ9 843 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 NSMFQ6X4W1 530 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 C1orf54Q8WWF1 131 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 ATXN3LQ9H3M9 355 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 VTI1BQ9UEU0 232 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 SORCS3Q9UPU3 1222 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 EIF3LQ9Y262 564 aaKnown RBP6.32□□□□□ -1.4
VCAN-203ENST00000343200 PCDHGA11Q9Y5H2 935 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 MAGI1Q96QZ7 1491 aaPredicted RBP6.32□□□□□ -1.4
VCAN-203ENST00000343200 TANC2Q9HCD6 1990 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 OR7A10O76100 309 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 CD2P06729 351 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 PRKACAP17612 351 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 CLCN2P51788 898 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 PRKG2Q13237 762 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 CLCA4Q14CN2 919 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 OTUD3Q5T2D3 398 aaPredicted RBP6.32□□□□□ -1.4
VCAN-203ENST00000343200 CMTR2Q8IYT2 770 aaKnown RBP6.32□□□□□ -1.4
VCAN-203ENST00000343200 DHRSXQ8N5I4 330 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 XPR1Q9UBH6 696 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 CKLFQ9UBR5 152 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 PMF1-BGLAPU3KQ54 211 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 PLEKHG1Q9ULL1 1385 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 PSMD3O43242 534 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 MGRN1O60291 552 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 RLN1P04808 185 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 TGM2P21980 687 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 CD79BP40259 229 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 ALDH3A2P51648 485 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms