RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 ATP6V0D2Q8N8Y2 350 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 KCTD6Q8NC69 237 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 ELMO3Q96BJ8 720 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 EPAS1Q99814 870 aa7.46□□□□□ -1.22
NUP43-201ENST00000340413 PRG3Q9Y2Y8 225 aaPredicted RBP7.46□□□□□ -1.22
NUP43-201ENST00000340413 IGLV3-10A0A075B6K4 115 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 TMEM110-MUSTN1A8MSY1 372 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 SRGAP2O75044 1071 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 RGS7P49802 495 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 ANKRD20A8PQ5CZ79 823 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 TEX35Q5T0J7 233 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 BSPRYQ5W0U4 402 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 ZNF365Q70YC5 407 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 SCUBE3Q8IX30 993 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 BADQ92934 168 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 LRRC45Q96CN5 670 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 CLSTN3Q9BQT9 956 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 SNRNP25Q9BV90 132 aaKnown RBP7.45□□□□□ -1.22
NUP43-201ENST00000340413 EIF2B3Q9NR50 452 aaKnown RBP7.45□□□□□ -1.22
NUP43-201ENST00000340413 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.45□□□□□ -1.22
NUP43-201ENST00000340413 HAUS2Q9NVX0 235 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 ZDHHC7Q9NXF8 308 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 LMCD1Q9NZU5 365 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 AP4E1Q9UPM8 1137 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 ZNF638Q14966 1978 aaKnown RBP7.45□□□□□ -1.22
NUP43-201ENST00000340413 A0A1W2PPC1 479 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 TULP2O00295 520 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 PSMD3O43242 534 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 BEST1O76090 585 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 GSTA2P09210 222 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 CPB1P15086 417 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 MX2P20592 715 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 CCR1P32246 355 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 ORC1Q13415 861 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 KRT81Q14533 505 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 AFMIDQ63HM1 303 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 RNF43Q68DV7 783 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 LRIG3Q6UXM1 1119 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 PPP1R21Q6ZMI0 780 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 FAM217AQ8IXS0 508 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 DQX1Q8TE96 717 aaKnown RBP7.45□□□□□ -1.22
NUP43-201ENST00000340413 PSMG2Q969U7 264 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 OLFM3Q96PB7 478 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 TSGA13Q96PP4 275 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 QKIQ96PU8 341 aaKnown RBP eCLIP7.45□□□□□ -1.22
NUP43-201ENST00000340413 MAK16Q9BXY0 300 aaKnown RBP7.45□□□□□ -1.22
NUP43-201ENST00000340413 PRDM5Q9NQX1 630 aaPredicted RBP7.45□□□□□ -1.22
NUP43-201ENST00000340413 PCNTO95613 3336 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 CLDN5O00501 218 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 CAPN9O14815 690 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 LPXNO60711 386 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 FGF18O76093 207 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 IL1R2P27930 398 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 IFNAR2P48551 515 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 EPHB3P54753 998 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 CDK16Q00536 496 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 C2orf54Q08AI8 447 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 ALS2CLQ60I27 953 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 ZNF449Q6P9G9 518 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 CCDC137Q6PK04 289 aaKnown RBP7.45□□□□□ -1.22
NUP43-201ENST00000340413 MFSD7Q6UXD7 560 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 SCD5Q86SK9 330 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 NOA1Q8NC60 698 aaKnown RBP7.45□□□□□ -1.22
NUP43-201ENST00000340413 RIN2Q8WYP3 895 aaPredicted RBP7.45□□□□□ -1.22
NUP43-201ENST00000340413 MAGOHBQ96A72 148 aaKnown RBP7.45□□□□□ -1.22
NUP43-201ENST00000340413 BTBD6Q96KE9 485 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 CAPZA3Q96KX2 299 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 PEBP4Q96S96 227 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 FUT8Q9BYC5 575 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 PARD6BQ9BYG5 372 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 CATSPERBQ9H7T0 1116 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 DZANK1Q9NVP4 752 aa7.45□□□□□ -1.22
NUP43-201ENST00000340413 WDR27A2RRH5 827 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 DRGXA6NNA5 263 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 ATP2A2P16615 1042 aaKnown RBP7.44□□□□□ -1.22
NUP43-201ENST00000340413 EN2P19622 333 aaPredicted RBP7.44□□□□□ -1.22
NUP43-201ENST00000340413 CDC25CP30307 473 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 ALDH1A3P47895 512 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 MARCKSL1P49006 195 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 MAPKAPK2P49137 400 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 OXCT1P55809 520 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 SLMAPQ14BN4 828 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 ERCC6LQ2NKX8 1250 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 KIAA1841Q6NSI8 718 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 JAMLQ86YT9 394 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 RNF139Q8WU17 664 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 ART4Q93070 314 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 SNF8Q96H20 258 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 ARFGAP3Q9NP61 516 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 MTMR10Q9NXD2 777 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 TJP2Q9UDY2 1190 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 PACSIN2Q9UNF0 486 aaPredicted RBP7.44□□□□□ -1.22
NUP43-201ENST00000340413 SHOC2Q9UQ13 582 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 YJEFN3A6XGL0 299 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 E7ENQ6 273 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 MCF2LO15068 1137 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 DCLK1O15075 740 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 KLRC2P26717 231 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 NDST2P52849 883 aa7.44□□□□□ -1.22
NUP43-201ENST00000340413 FAM193AP78312 1265 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms