RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 EFTUD2Q15029 972 aaKnown RBP eCLIP7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 SLC9A4Q6AI14 798 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 TMEM173Q86WV6 379 aaPredicted RBP7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 NAT8LQ8N9F0 302 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 KCTD13Q8WZ19 329 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 PKMYT1Q99640 499 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 POPDC2Q9HBU9 364 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 WDR6Q9NNW5 1121 aaKnown RBP7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 PIH1D1Q9NWS0 290 aaKnown RBP7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 DTLQ9NZJ0 730 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 CDH9Q9ULB4 789 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 FZD10Q9ULW2 581 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 USP3Q9Y6I4 520 aa7.69□□□□□ -1.18
SRFBP1-201ENST00000339397 M0QZQ0 153 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 CAPN9O14815 690 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 FKTNO75072 461 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 CABYRO75952 493 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 ZBED1O96006 694 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 GCAP28676 217 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 LSP1P33241 339 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 NOS2P35228 1153 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 MDH1P40925 334 aaKnown RBP7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 RAB27AP51159 221 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 GPX6P59796 221 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 RNASELQ05823 741 aaKnown RBP7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 MPP2Q14168 576 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 PDK2Q15119 407 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 INTS6LQ5JSJ4 861 aaKnown RBP7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 RAB41Q5JT25 222 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 NCBP2-AS2Q69YL0 99 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 KCNT2Q6UVM3 1135 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 TRMT10CQ7L0Y3 403 aaKnown RBP7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 EXOC3L1Q86VI1 746 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 CEP57Q86XR8 500 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 MAP7D3Q8IWC1 876 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 COLGALT2Q8IYK4 626 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 TTC13Q8NBP0 860 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 TEKT4Q8WW24 435 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 PGBD4Q96DM1 585 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 CFHR5Q9BXR6 569 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 CLUHO75153 1309 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 ENPP3O14638 875 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 EIF3HO15372 352 aaKnown RBP eCLIP7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 METTL18O95568 372 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 MAP2K2P36507 400 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 CDK7P50613 346 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 EIF3BP55884 814 aaKnown RBP7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 PPP2R2AP63151 447 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 DEUP1Q05D60 604 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 OLIG2Q13516 323 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 TFDP2Q14188 446 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 MORF4L2Q15014 288 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 DDR2Q16832 855 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 SLC39A12Q504Y0 691 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 NOMO2Q5JPE7 1267 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 SPDYCQ5MJ68 293 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 BSPRYQ5W0U4 402 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 SMYD5Q6GMV2 418 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 DCLRE1AQ6PJP8 1040 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 GLB1LQ6UWU2 654 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 LRRC8DQ7L1W4 858 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 BNIPLQ7Z465 357 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 TMCO2Q7Z6W1 182 aaPredicted RBP7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 BCAS4Q8TDM0 211 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 FAF2Q96CS3 445 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 SMARCD1Q96GM5 515 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 SLC2A13Q96QE2 648 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 ACBD6Q9BR61 282 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 GPR62Q9BZJ7 368 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 UBN1Q9NPG3 1134 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 ARHGEF4Q9NR80 690 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 RAB6BQ9NRW1 208 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 DDIT4Q9NX09 232 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 XPO7Q9UIA9 1087 aaKnown RBP7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 PRDM4Q9UKN5 801 aa7.68□□□□□ -1.18
SRFBP1-201ENST00000339397 EYSQ5T1H1 3165 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 POC1B-GALNT4F8VUJ3 575 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 MFSD11O43934 449 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 LTFP02788 710 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 VAV1P15498 845 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 PCSK1P29120 753 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 NUMBP49757 651 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 SNX16P57768 344 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 FAM189BP81408 668 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 CAV1Q03135 178 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 YWHAHQ04917 246 aaPredicted RBP7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 DSC1Q08554 894 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 LRRC14Q15048 493 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 BBS9Q3SYG4 887 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 TNFAIP8L3Q5GJ75 292 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 AGBL2Q5U5Z8 902 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 EMC10Q5UCC4 262 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 ARCQ7LC44 396 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 STRADAQ7RTN6 431 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 TAS1R1Q7RTX1 841 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 FAM126BQ8IXS8 530 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 ATAD1Q8NBU5 361 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 PGM2Q96G03 612 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 SUSD3Q96L08 255 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 SELENOSQ9BQE4 189 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms