RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 THP07101 528 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 FMR1Q06787 632 aaKnown RBP eCLIP12.09□□□□□ -0.47
SHANK2-201ENST00000338508 VPS33BQ9H267 617 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 KCNH7Q9NS40 1196 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 ALG6Q9Y672 507 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 EGFRP00533 1210 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 JCHAINP01591 159 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 SEC24CP53992 1094 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 MRPS35P82673 323 aaKnown RBP12.09□□□□□ -0.47
SHANK2-201ENST00000338508 PKN2Q16513 984 aaKnown RBP12.09□□□□□ -0.47
SHANK2-201ENST00000338508 TMEM26Q6ZUK4 368 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 MB21D2Q8IYB1 491 aaPredicted RBP12.09□□□□□ -0.47
SHANK2-201ENST00000338508 ZNF671Q8TAW3 534 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 FAM172AQ8WUF8 416 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 NMD3Q96D46 503 aaKnown RBP12.09□□□□□ -0.47
SHANK2-201ENST00000338508 CLEC4MQ9H2X3 399 aaPredicted RBP12.09□□□□□ -0.47
SHANK2-201ENST00000338508 C10orf88Q9H8K7 445 aa12.09□□□□□ -0.47
SHANK2-201ENST00000338508 TLR8Q9NR97 1041 aaKnown RBP12.09□□□□□ -0.47
SHANK2-201ENST00000338508 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.08□□□□□ -0.47
SHANK2-201ENST00000338508 CSF1RP07333 972 aa12.08□□□□□ -0.47
SHANK2-201ENST00000338508 PTSQ03393 145 aa12.08□□□□□ -0.47
SHANK2-201ENST00000338508 OMDQ99983 421 aa12.08□□□□□ -0.47
SHANK2-201ENST00000338508 DAGLAQ9Y4D2 1042 aa12.08□□□□□ -0.47
SHANK2-201ENST00000338508 KPNA3O00505 521 aaPredicted RBP12.08□□□□□ -0.48
SHANK2-201ENST00000338508 TCEA3O75764 348 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 AMD1P17707 334 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 IRX1P78414 480 aaPredicted RBP12.08□□□□□ -0.48
SHANK2-201ENST00000338508 SCRN3Q0VDG4 424 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 NDUFAF6Q330K2 333 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 SEL1L3Q68CR1 1132 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 SLC30A9Q6PML9 568 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 FBXO36Q8NEA4 188 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 NEK7Q8TDX7 302 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 CYLDQ9NQC7 956 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 PTGES3LE9PB15 166 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 HIST1H2ABP04908 130 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 IL6P05231 212 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 CCDC130P13994 396 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 FDFT1P37268 417 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 HIST3H2AQ7L7L0 130 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 HIST1H2ACQ93077 130 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 THAP2Q9H0W7 228 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 RNF19AQ9NV58 838 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 TUBGCP4Q9UGJ1 667 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 RBMXL2O75526 392 aaKnown RBP12.08□□□□□ -0.48
SHANK2-201ENST00000338508 ATP1A4Q13733 1029 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 PARGQ86W56 976 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 ADAM32Q8TC27 787 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 CERKQ8TCT0 537 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 EPS8L3Q8TE67 593 aaKnown RBP12.08□□□□□ -0.48
SHANK2-201ENST00000338508 TRIT1Q9H3H1 467 aaKnown RBP12.08□□□□□ -0.48
SHANK2-201ENST00000338508 TBX20Q9UMR3 447 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 AP4E1Q9UPM8 1137 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 MEI4A8MW99 385 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 O00370 1275 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 KIAA0391O15091 583 aaKnown RBP12.08□□□□□ -0.48
SHANK2-201ENST00000338508 PIK3R1P27986 724 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 COILP38432 576 aaPredicted RBP12.08□□□□□ -0.48
SHANK2-201ENST00000338508 PNPLA4P41247 253 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 IL2P60568 153 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 CGRRF1Q99675 332 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 TUBE1Q9UJT0 475 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 DNAJC16Q9Y2G8 782 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 CENPXA8MT69 81 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 MTSS1O43312 755 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 CUL2Q13617 745 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 TRAPPC11Q7Z392 1133 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 FNDC5Q8NAU1 212 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 NEDD1Q8NHV4 660 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 BPIFA3Q9BQP9 254 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 TMEM79Q9BSE2 394 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 TMEM121Q9BTD3 319 aa12.08□□□□□ -0.48
SHANK2-201ENST00000338508 PDS5AQ29RF7 1337 aaKnown RBP12.07□□□□□ -0.48
SHANK2-201ENST00000338508 TRIM3O75382 744 aaPredicted RBP12.07□□□□□ -0.48
SHANK2-201ENST00000338508 SLC25A27O95847 323 aa12.07□□□□□ -0.48
SHANK2-201ENST00000338508 IGKV5-2P06315 115 aa12.07□□□□□ -0.48
SHANK2-201ENST00000338508 PABPC1P11940 636 aaKnown RBP12.07□□□□□ -0.48
SHANK2-201ENST00000338508 ALOX12P18054 663 aa12.07□□□□□ -0.48
SHANK2-201ENST00000338508 TCHHL1Q5QJ38 904 aaPredicted RBP12.07□□□□□ -0.48
SHANK2-201ENST00000338508 FAM171BQ6P995 826 aa12.07□□□□□ -0.48
SHANK2-201ENST00000338508 SIRT2Q8IXJ6 389 aa12.07□□□□□ -0.48
SHANK2-201ENST00000338508 SLITRK2Q9H156 845 aa12.07□□□□□ -0.48
SHANK2-201ENST00000338508 MYO5CQ9NQX4 1742 aa12.07□□□□□ -0.48
SHANK2-201ENST00000338508 MTRF1O75570 445 aaKnown RBP12.07□□□□□ -0.48
SHANK2-201ENST00000338508 OR1E1P30953 314 aa12.07□□□□□ -0.48
SHANK2-201ENST00000338508 EPS8Q12929 822 aa12.07□□□□□ -0.48
SHANK2-201ENST00000338508 OASLQ15646 514 aaKnown RBP12.07□□□□□ -0.48
SHANK2-201ENST00000338508 NAB2Q15742 525 aa12.07□□□□□ -0.48
SHANK2-201ENST00000338508 ZNF621Q6ZSS3 439 aa12.07□□□□□ -0.48
SHANK2-201ENST00000338508 ILDR2Q71H61 639 aa12.07□□□□□ -0.48
SHANK2-201ENST00000338508 CDH24Q86UP0 819 aa12.07□□□□□ -0.48
SHANK2-201ENST00000338508 TMEM159Q96B96 161 aa12.07□□□□□ -0.48
SHANK2-201ENST00000338508 ALKBH4Q9NXW9 302 aa12.07□□□□□ -0.48
SHANK2-201ENST00000338508 PHTF1Q9UMS5 762 aa12.07□□□□□ -0.48
SHANK2-201ENST00000338508 SHOC2Q9UQ13 582 aa12.07□□□□□ -0.48
SHANK2-201ENST00000338508 EIF3DO15371 548 aaKnown RBP eCLIP12.07□□□□□ -0.482e-6■□□□□ 11
SHANK2-201ENST00000338508 ACAD10Q6JQN1 1059 aa12.07□□□□□ -0.48
SHANK2-201ENST00000338508 PACS1Q6VY07 963 aa12.07□□□□□ -0.48
SHANK2-201ENST00000338508 METTL16Q86W50 562 aaKnown RBP12.07□□□□□ -0.48
SHANK2-201ENST00000338508 TRAPPC5Q8IUR0 188 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms