RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 CRELD2Q6UXH1 353 aaPredicted RBP6.49□□□□□ -1.37
PRKDC-202ENST00000338368 SLC26A7Q8TE54 656 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 SMARCD1Q96GM5 515 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.49□□□□□ -1.37
PRKDC-202ENST00000338368 SLC8A2Q9UPR5 921 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 SLC30A1Q9Y6M5 507 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 CLDN5O00501 218 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 NPR3P17342 541 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 CNTFP26441 200 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 ALDH7A1P49419 539 aaKnown RBP6.49□□□□□ -1.37
PRKDC-202ENST00000338368 MRPS5P82675 430 aaKnown RBP6.49□□□□□ -1.37
PRKDC-202ENST00000338368 HIC1Q14526 733 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 ACCSLQ4AC99 568 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 ELMOD1Q8N336 334 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 LRRC39Q96DD0 335 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 CELF6Q96J87 481 aaKnown RBP6.49□□□□□ -1.37
PRKDC-202ENST00000338368 LRGUKQ96M69 825 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 TRIM33Q9UPN9 1127 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 STYXL1Q9Y6J8 313 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 TIMM44O43615 452 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 FAAP100Q0VG06 881 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 C9orf57Q5W0N0 161 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 FNIP1Q8TF40 1166 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 TMEM169Q96HH4 297 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 TKTL2Q9H0I9 626 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 MINDY3Q9H8M7 445 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 SUN2Q9UH99 717 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 IPPQ9Y573 584 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 PCDHB7Q9Y5E2 793 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 HACD1B0YJ81 288 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 NEMP1O14524 444 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 SNX2O60749 519 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 YBX3P16989 372 aaKnown RBP eCLIP6.49□□□□□ -1.372e-8■■□□□ 13.4
PRKDC-202ENST00000338368 RECQLP46063 649 aaPredicted RBP6.49□□□□□ -1.37
PRKDC-202ENST00000338368 CDH17Q12864 832 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 ICE2Q659A1 982 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 TCP10LQ8TDR4 215 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 ATXN2LQ8WWM7 1075 aaKnown RBP6.49□□□□□ -1.37
PRKDC-202ENST00000338368 BRI3BPQ8WY22 251 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 SEPT8Q92599 483 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 ZBED3Q96IU2 234 aaPredicted RBP6.49□□□□□ -1.37
PRKDC-202ENST00000338368 ZNF670Q9BS34 389 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 SARS2Q9NP81 518 aaKnown RBP6.49□□□□□ -1.37
PRKDC-202ENST00000338368 TUBGCP4Q9UGJ1 667 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 ANGPTL2Q9UKU9 493 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 ENO1P06733 434 aaKnown RBP6.49□□□□□ -1.37
PRKDC-202ENST00000338368 ABHD2P08910 425 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 KIF19Q2TAC6 998 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 SLC45A4Q5BKX6 768 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 SH2D4BQ5SQS7 431 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 CKAP2Q8WWK9 683 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 HEY2Q9UBP5 337 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 TRHDEQ9UKU6 1024 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 TREHO43280 583 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 TPH1P17752 444 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 ALDH18A1P54886 795 aaKnown RBP6.49□□□□□ -1.37
PRKDC-202ENST00000338368 PDAP1Q13442 181 aaKnown RBP6.49□□□□□ -1.37
PRKDC-202ENST00000338368 MAP7Q14244 749 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 RBBP5Q15291 538 aaKnown RBP6.49□□□□□ -1.37
PRKDC-202ENST00000338368 ZNF280DQ6N043 979 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 TIGD7Q6NT04 549 aaPredicted RBP6.49□□□□□ -1.37
PRKDC-202ENST00000338368 TMEM192Q8IY95 271 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 LZTR1Q8N653 840 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 FBXO32Q969P5 355 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 BRD8Q9H0E9 1235 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 Q9H521 79 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 IARS2Q9NSE4 1012 aaKnown RBP6.49□□□□□ -1.37
PRKDC-202ENST00000338368 E5RI56 91 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 OPHN1O60890 802 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 UBOX5O94941 541 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 IRF1P10914 325 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 GRK2P25098 689 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 MGAT1P26572 445 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 NR2C2P49116 596 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 MRPS6P82932 125 aaKnown RBP6.48□□□□□ -1.37
PRKDC-202ENST00000338368 BFSP2Q13515 415 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 SPRYD7Q5W111 196 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 USP12O75317 370 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 ITGAVP06756 1048 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 ATP4AP20648 1035 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 BDNFP23560 247 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 MATKP42679 507 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 SCTRP47872 440 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 NUMBP49757 651 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 RFX8Q6ZV50 586 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 SGF29Q96ES7 293 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 PGLYRP2Q96PD5 576 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 NUF2Q9BZD4 464 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 PRDM16Q9HAZ2 1276 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 OR12D3Q9UGF7 316 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 PCDHB5Q9Y5E4 795 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-202ENST00000338368 SMPD1P17405 629 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 CD52P31358 61 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 CDK16Q00536 496 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 FAM83EQ2M2I3 478 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 SLC4A11Q8NBS3 891 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 ZDHHC18Q9NUE0 388 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 CPSF2Q9P2I0 782 aaKnown RBP6.48□□□□□ -1.37
PRKDC-202ENST00000338368 ACTL7BQ9Y614 415 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms