RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 MAGEA10P43363 369 aaPredicted RBP15.28■□□□□ 0.04
CBX3-201ENST00000337620 ALDH1A3P47895 512 aa15.28■□□□□ 0.04
CBX3-201ENST00000337620 CREMQ03060 361 aa15.28■□□□□ 0.04
CBX3-201ENST00000337620 PYROXD2Q8N2H3 581 aa15.28■□□□□ 0.04
CBX3-201ENST00000337620 C12orf50Q8NA57 414 aaPredicted RBP15.28■□□□□ 0.04
CBX3-201ENST00000337620 C17orf80Q9BSJ5 609 aa15.28■□□□□ 0.04
CBX3-201ENST00000337620 WDCPQ9H6R7 721 aa15.28■□□□□ 0.04
CBX3-201ENST00000337620 WDR6Q9NNW5 1121 aaKnown RBP15.28■□□□□ 0.04
CBX3-201ENST00000337620 HOMER3Q9NSC5 361 aa15.28■□□□□ 0.04
CBX3-201ENST00000337620 NR2E3Q9Y5X4 410 aa15.28■□□□□ 0.04
CBX3-201ENST00000337620 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.27■□□□□ 0.04
CBX3-201ENST00000337620 FAM92AA1XBS5 289 aa15.27■□□□□ 0.04
CBX3-201ENST00000337620 ZSCAN5CA6NGD5 496 aaPredicted RBP15.27■□□□□ 0.04
CBX3-201ENST00000337620 CNPP09543 421 aaKnown RBP15.27■□□□□ 0.04
CBX3-201ENST00000337620 SPATA31D3P0C874 917 aa15.27■□□□□ 0.04
CBX3-201ENST00000337620 IL4RP24394 825 aa15.27■□□□□ 0.04
CBX3-201ENST00000337620 DPYSL2Q16555 572 aa15.27■□□□□ 0.04
CBX3-201ENST00000337620 CCNG2Q16589 344 aa15.27■□□□□ 0.04
CBX3-201ENST00000337620 FBXO38Q6PIJ6 1188 aa15.27■□□□□ 0.04
CBX3-201ENST00000337620 SPATA31D4Q6ZUB0 917 aa15.27■□□□□ 0.04
CBX3-201ENST00000337620 GPR65Q8IYL9 337 aa15.27■□□□□ 0.04
CBX3-201ENST00000337620 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.27■□□□□ 0.04
CBX3-201ENST00000337620 CASP10Q92851 521 aa15.27■□□□□ 0.04
CBX3-201ENST00000337620 KCTD15Q96SI1 283 aaPredicted RBP15.27■□□□□ 0.04
CBX3-201ENST00000337620 TCF25Q9BQ70 676 aa15.27■□□□□ 0.04
CBX3-201ENST00000337620 RXFP1Q9HBX9 757 aa15.27■□□□□ 0.04
CBX3-201ENST00000337620 EPB41L5Q9HCM4 733 aa15.27■□□□□ 0.04
CBX3-201ENST00000337620 ENTPD7Q9NQZ7 604 aa15.27■□□□□ 0.04
CBX3-201ENST00000337620 TLR8Q9NR97 1041 aaKnown RBP15.27■□□□□ 0.04
CBX3-201ENST00000337620 ARGLU1Q9NWB6 273 aaPredicted RBP15.27■□□□□ 0.04
CBX3-201ENST00000337620 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.27■□□□□ 0.04
CBX3-201ENST00000337620 COMMD8Q9NX08 183 aa15.27■□□□□ 0.04
CBX3-201ENST00000337620 HSFX1Q9UBD0 423 aa15.27■□□□□ 0.04
CBX3-201ENST00000337620 SAE1Q9UBE0 346 aaPredicted RBP15.27■□□□□ 0.04
CBX3-201ENST00000337620 PCYOX1Q9UHG3 505 aa15.27■□□□□ 0.04
CBX3-201ENST00000337620 FBXW11Q9UKB1 542 aa15.27■□□□□ 0.04
CBX3-201ENST00000337620 RAB21Q9UL25 225 aa15.27■□□□□ 0.04
CBX3-201ENST00000337620 TUBBP07437 444 aa15.26■□□□□ 0.03
CBX3-201ENST00000337620 ADRA1BP35368 520 aa15.26■□□□□ 0.03
CBX3-201ENST00000337620 FNTAP49354 379 aa15.26■□□□□ 0.03
CBX3-201ENST00000337620 DHX34Q14147 1143 aaKnown RBP15.26■□□□□ 0.03
CBX3-201ENST00000337620 SHHQ15465 462 aa15.26■□□□□ 0.03
CBX3-201ENST00000337620 ANKRD20A8PQ5CZ79 823 aa15.26■□□□□ 0.03
CBX3-201ENST00000337620 EFHC2Q5JST6 749 aa15.26■□□□□ 0.03
CBX3-201ENST00000337620 FAM109BQ6ICB4 259 aaPredicted RBP15.26■□□□□ 0.03
CBX3-201ENST00000337620 WDR93Q6P2C0 686 aa15.26■□□□□ 0.03
CBX3-201ENST00000337620 BBS12Q6ZW61 710 aa15.26■□□□□ 0.03
CBX3-201ENST00000337620 SPRED2Q7Z698 418 aa15.26■□□□□ 0.03
CBX3-201ENST00000337620 RNF157Q96PX1 679 aa15.26■□□□□ 0.03
CBX3-201ENST00000337620 MTMR10Q9NXD2 777 aa15.26■□□□□ 0.03
CBX3-201ENST00000337620 YIPF1Q9Y548 306 aa15.26■□□□□ 0.03
CBX3-201ENST00000337620 ESYT3A0FGR9 886 aa15.26■□□□□ 0.03
CBX3-201ENST00000337620 RARGP13631 454 aa15.26■□□□□ 0.03
CBX3-201ENST00000337620 H2AFXP16104 143 aaPredicted RBP15.26■□□□□ 0.03
CBX3-201ENST00000337620 MCM3P25205 808 aa15.26■□□□□ 0.03
CBX3-201ENST00000337620 CXCR3P49682 368 aa15.26■□□□□ 0.03
CBX3-201ENST00000337620 ERVFC1P60507 584 aa15.26■□□□□ 0.03
CBX3-201ENST00000337620 TAF12Q16514 161 aa15.26■□□□□ 0.03
CBX3-201ENST00000337620 ARL13BQ3SXY8 428 aa15.26■□□□□ 0.03
CBX3-201ENST00000337620 PSTKQ8IV42 348 aaKnown RBP15.26■□□□□ 0.03
CBX3-201ENST00000337620 CCDC114Q96M63 670 aa15.26■□□□□ 0.03
CBX3-201ENST00000337620 CEP295NLQ96MC4 621 aa15.26■□□□□ 0.03
CBX3-201ENST00000337620 RUNDC3BQ96NL0 473 aa15.26■□□□□ 0.03
CBX3-201ENST00000337620 ZNF670Q9BS34 389 aa15.26■□□□□ 0.03
CBX3-201ENST00000337620 TRIM51Q9BSJ1 452 aa15.26■□□□□ 0.03
CBX3-201ENST00000337620 TKTL2Q9H0I9 626 aa15.26■□□□□ 0.03
CBX3-201ENST00000337620 SMOC2Q9H3U7 446 aa15.26■□□□□ 0.03
CBX3-201ENST00000337620 RWDD3Q9Y3V2 267 aa15.26■□□□□ 0.03
CBX3-201ENST00000337620 ZNF638Q14966 1978 aaKnown RBP15.26■□□□□ 0.03
CBX3-201ENST00000337620 PLXNA4Q9HCM2 1894 aa15.26■□□□□ 0.03
CBX3-201ENST00000337620 MSI1O43347 362 aaKnown RBP15.25■□□□□ 0.03
CBX3-201ENST00000337620 ARHGEF15O94989 841 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 IGLV3-25P01717 112 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 PTGIRP43119 386 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 PSEN1P49768 467 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 TWF1Q12792 350 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 TFDP2Q14188 446 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 JAMLQ86YT9 394 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 IFT20Q8IY31 132 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 FAM71BQ8TC56 605 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 POF1BQ8WVV4 589 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 IFT81Q8WYA0 676 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 NTAN1Q96AB6 310 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 ANLNQ9NQW6 1124 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 UTP11Q9Y3A2 253 aaKnown RBP15.25■□□□□ 0.03
CBX3-201ENST00000337620 GREB1Q4ZG55 1949 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 PLXNA3P51805 1871 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 IRAK2O43187 625 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 CREB3O43889 395 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 TBX18O95935 607 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 CSH1P0DML2 217 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 CSH2P0DML3 217 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 GOT1P17174 413 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 ARL4AP40617 200 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 AIF1P55008 147 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 OTUD4Q01804 1114 aaKnown RBP15.25■□□□□ 0.03
CBX3-201ENST00000337620 EFEMP1Q12805 493 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 VEPH1Q14D04 833 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 BRD3Q15059 726 aa15.25■□□□□ 0.03
CBX3-201ENST00000337620 PLPP4Q5VZY2 271 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms