RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 SIX1Q15475 284 aaPredicted RBP8.5□□□□□ -1.05
HPS4-201ENST00000336873 TRIP10Q15642 601 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 TAF12Q16514 161 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 CD101Q93033 1021 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 SH3GL3Q99963 347 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 VCXQ9H320 206 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 PAK5Q9P286 719 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 CYTH4Q9UIA0 394 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 C15orf41Q9Y2V0 281 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 ARFGEF1Q9Y6D6 1849 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 CCL15-CCL14A0A0B4J2E2 113 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 RECQL4O94761 1208 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 SEC24DO94855 1032 aaPredicted RBP8.5□□□□□ -1.05
HPS4-201ENST00000336873 SKIP12755 728 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 USP10Q14694 798 aaKnown RBP8.5□□□□□ -1.05
HPS4-201ENST00000336873 DLG2Q15700 870 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 CCL15Q16663 113 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 SDHAF4Q5VUM1 108 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 SNX30Q5VWJ9 437 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 FOXR2Q6PJQ5 311 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 C6orf89Q6UWU4 347 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 NIPA1Q7RTP0 329 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 TFAP2DQ7Z6R9 452 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 SPATA24Q86W54 205 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 MIB1Q86YT6 1006 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 SUGP1Q8IWZ8 645 aaKnown RBP8.5□□□□□ -1.05
HPS4-201ENST00000336873 ZC3H3Q8IXZ2 948 aaKnown RBP8.5□□□□□ -1.05
HPS4-201ENST00000336873 FAM13CQ8NE31 585 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 OR52K1Q8NGK4 314 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 GRAMD1AQ96CP6 724 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 TEPSINQ96N21 525 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 GMLQ99445 158 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 FSD1LQ9BXM9 530 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 EIF2AQ9BY44 585 aaKnown RBP8.5□□□□□ -1.05
HPS4-201ENST00000336873 GCOM2Q9BZD3 368 aaPredicted RBP8.5□□□□□ -1.05
HPS4-201ENST00000336873 PIF1Q9H611 641 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 SCOCQ9UIL1 159 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 COQ4Q9Y3A0 265 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.5□□□□□ -1.05
HPS4-201ENST00000336873 SIGLEC16A6NMB1 481 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 CEP290O15078 2479 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 STAMBPO95630 424 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 PROCP04070 461 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 CYP1A1P04798 512 aaPredicted RBP8.5□□□□□ -1.05
HPS4-201ENST00000336873 LGALS2P05162 132 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 ATXN8OSP0DMR3 200 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 EIF4BP23588 611 aaKnown RBP8.5□□□□□ -1.05
HPS4-201ENST00000336873 PSMB4P28070 264 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 STIP1P31948 543 aaKnown RBP8.5□□□□□ -1.05
HPS4-201ENST00000336873 RANBP1P43487 201 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 SNX16P57768 344 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 ART3Q13508 389 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 CYTH1Q15438 398 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 ANO4Q32M45 955 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 EFHC2Q5JST6 749 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 YTHDF3Q7Z739 585 aaKnown RBP8.5□□□□□ -1.05
HPS4-201ENST00000336873 SLC26A11Q86WA9 606 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 PHF13Q86YI8 300 aaPredicted RBP8.5□□□□□ -1.05
HPS4-201ENST00000336873 TEX9Q8N6V9 391 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 GPR152Q8TDT2 470 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 APOC4-APOC2K7ER74 178 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 EEF2KO00418 725 aaKnown RBP8.49□□□□□ -1.05
HPS4-201ENST00000336873 CCL22O00626 93 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 PEX1O43933 1283 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 MSCO60682 206 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 MAFO75444 373 aaPredicted RBP8.49□□□□□ -1.05
HPS4-201ENST00000336873 ZWINTO95229 277 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 APOC2P02655 101 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 USP17L7P0C7H9 530 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 PTDSS1P48651 473 aaKnown RBP8.49□□□□□ -1.05
HPS4-201ENST00000336873 GPX6P59796 221 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 OCRLQ01968 901 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 KHDC1Q4VXA5 237 aaKnown RBP8.49□□□□□ -1.05
HPS4-201ENST00000336873 PIGWQ7Z7B1 504 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 ZBTB46Q86UZ6 589 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 TP53INP2Q8IXH6 220 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 KCTD17Q8N5Z5 321 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 RDM1Q8NG50 284 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 PHF21BQ96EK2 531 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 TSC22D3Q99576 134 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 EBF4Q9BQW3 602 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 SPON2Q9BUD6 331 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 DNAI2Q9GZS0 605 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 SDCBP2Q9H190 292 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 DENND2DQ9H6A0 471 aaPredicted RBP8.49□□□□□ -1.05
HPS4-201ENST00000336873 IARS2Q9NSE4 1012 aaKnown RBP8.49□□□□□ -1.05
HPS4-201ENST00000336873 SENP1Q9P0U3 644 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 BARX2Q9UMQ3 279 aaPredicted RBP8.49□□□□□ -1.05
HPS4-201ENST00000336873 LAMB2P55268 1798 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 MAST2Q6P0Q8 1798 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 PRR5-ARHGAP8B1AHC4 643 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 VDRP11473 427 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 TGM2P21980 687 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 PKNOX1P55347 436 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 ARHGAP8P85298 464 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 XRCC4Q13426 336 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 TTC39BQ5VTQ0 682 aaPredicted RBP8.49□□□□□ -1.05
HPS4-201ENST00000336873 ARMC3Q5W041 872 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 STRA8Q7Z7C7 330 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 LCA5Q86VQ0 697 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms