RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 MAP3K6O95382 1288 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 NCAM1P13591 858 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 CAPN2P17655 700 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 AMPD1P23109 780 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 ATP1A2P50993 1020 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 NRLP54845 237 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 GBE1Q04446 702 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 SKIDA1Q1XH10 827 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 SLC39A12Q504Y0 691 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 NCBP2-AS2Q69YL0 99 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 PM20D1Q6GTS8 502 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 CDKL3Q8IVW4 592 aaPredicted RBP12.92□□□□□ -0.34
ZNF548-201ENST00000336128 TAB3Q8N5C8 712 aaPredicted RBP12.92□□□□□ -0.34
ZNF548-201ENST00000336128 ADAM32Q8TC27 787 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 APBB2Q92870 758 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 TLCD1Q96CP7 247 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 C9orf72Q96LT7 481 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 ZCWPW1Q9H0M4 648 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 PNPLA8Q9NP80 782 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 RRN3Q9NYV6 651 aa12.92□□□□□ -0.34
ZNF548-201ENST00000336128 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.91□□□□□ -0.34
ZNF548-201ENST00000336128 BCLAF3A2AJT9 711 aaKnown RBP12.91□□□□□ -0.34
ZNF548-201ENST00000336128 KCNN4O15554 427 aa12.91□□□□□ -0.34
ZNF548-201ENST00000336128 TRAPPC3O43617 180 aa12.91□□□□□ -0.34
ZNF548-201ENST00000336128 SHOX2O60902 331 aaPredicted RBP12.91□□□□□ -0.34
ZNF548-201ENST00000336128 OAZ2O95190 189 aa12.91□□□□□ -0.34
ZNF548-201ENST00000336128 RBL1P28749 1068 aa12.91□□□□□ -0.34
ZNF548-201ENST00000336128 HPDP32754 393 aaPredicted RBP12.91□□□□□ -0.34
ZNF548-201ENST00000336128 EFHC2Q5JST6 749 aa12.91□□□□□ -0.34
ZNF548-201ENST00000336128 C6orf118Q5T5N4 469 aa12.91□□□□□ -0.34
ZNF548-201ENST00000336128 EMC10Q5UCC4 262 aa12.91□□□□□ -0.34
ZNF548-201ENST00000336128 NAT8LQ8N9F0 302 aa12.91□□□□□ -0.34
ZNF548-201ENST00000336128 RNF139Q8WU17 664 aa12.91□□□□□ -0.34
ZNF548-201ENST00000336128 EDEM1Q92611 657 aa12.91□□□□□ -0.34
ZNF548-201ENST00000336128 NTAN1Q96AB6 310 aa12.91□□□□□ -0.34
ZNF548-201ENST00000336128 RTP4Q96DX8 246 aa12.91□□□□□ -0.34
ZNF548-201ENST00000336128 PGAP3Q96FM1 320 aaPredicted RBP12.91□□□□□ -0.34
ZNF548-201ENST00000336128 PGM2Q96G03 612 aa12.91□□□□□ -0.34
ZNF548-201ENST00000336128 SCLYQ96I15 445 aa12.91□□□□□ -0.34
ZNF548-201ENST00000336128 SLC9A7Q96T83 725 aa12.91□□□□□ -0.34
ZNF548-201ENST00000336128 CAPS2Q9BXY5 557 aa12.91□□□□□ -0.34
ZNF548-201ENST00000336128 WDR6Q9NNW5 1121 aaKnown RBP12.91□□□□□ -0.34
ZNF548-201ENST00000336128 MFHAS1Q9Y4C4 1052 aa12.91□□□□□ -0.34
ZNF548-201ENST00000336128 RASGRF2O14827 1237 aa12.91□□□□□ -0.34
ZNF548-201ENST00000336128 RGS16O15492 202 aaPredicted RBP12.91□□□□□ -0.34
ZNF548-201ENST00000336128 SLCO1A2P46721 670 aa12.91□□□□□ -0.34
ZNF548-201ENST00000336128 ATN1P54259 1190 aaPredicted RBP12.91□□□□□ -0.34
ZNF548-201ENST00000336128 AIF1P55008 147 aa12.91□□□□□ -0.34
ZNF548-201ENST00000336128 MAGOHP61326 146 aaKnown RBP12.91□□□□□ -0.34
ZNF548-201ENST00000336128 GAD2Q05329 585 aa12.91□□□□□ -0.34
ZNF548-201ENST00000336128 SLC10A2Q12908 348 aaPredicted RBP12.91□□□□□ -0.34
ZNF548-201ENST00000336128 XRCC4Q13426 336 aa12.91□□□□□ -0.34
ZNF548-201ENST00000336128 BSPRYQ5W0U4 402 aa12.91□□□□□ -0.34
ZNF548-201ENST00000336128 DCP1BQ8IZD4 617 aaKnown RBP12.91□□□□□ -0.34
ZNF548-201ENST00000336128 QKIQ96PU8 341 aaKnown RBP eCLIP12.91□□□□□ -0.346e-7■■■■□ 19.5
ZNF548-201ENST00000336128 BEGAINQ9BUH8 593 aa12.91□□□□□ -0.34
ZNF548-201ENST00000336128 ROPN1BQ9BZX4 212 aaPredicted RBP12.91□□□□□ -0.34
ZNF548-201ENST00000336128 ROPN1Q9HAT0 212 aaPredicted RBP12.91□□□□□ -0.34
ZNF548-201ENST00000336128 PRDM16Q9HAZ2 1276 aa12.91□□□□□ -0.34
ZNF548-201ENST00000336128 ARHGEF4Q9NR80 690 aa12.91□□□□□ -0.34
ZNF548-201ENST00000336128 ETNK2Q9NVF9 386 aa12.91□□□□□ -0.34
ZNF548-201ENST00000336128 DDIT4Q9NX09 232 aa12.91□□□□□ -0.34
ZNF548-201ENST00000336128 DCDC2CA8MYV0 355 aa12.9□□□□□ -0.34
ZNF548-201ENST00000336128 GOLGA8MH3BSY2 632 aa12.9□□□□□ -0.34
ZNF548-201ENST00000336128 SYN3O14994 580 aa12.9□□□□□ -0.34
ZNF548-201ENST00000336128 TMEM63AO94886 807 aa12.9□□□□□ -0.34
ZNF548-201ENST00000336128 ADRA1BP35368 520 aa12.9□□□□□ -0.34
ZNF548-201ENST00000336128 GRIK1P39086 918 aa12.9□□□□□ -0.34
ZNF548-201ENST00000336128 NR2C2P49116 596 aa12.9□□□□□ -0.34
ZNF548-201ENST00000336128 GNGT1P63211 74 aa12.9□□□□□ -0.34
ZNF548-201ENST00000336128 BASP1P80723 227 aaKnown RBP12.9□□□□□ -0.34
ZNF548-201ENST00000336128 SCAPQ12770 1279 aa12.9□□□□□ -0.34
ZNF548-201ENST00000336128 SLC45A4Q5BKX6 768 aa12.9□□□□□ -0.34
ZNF548-201ENST00000336128 VARS2Q5ST30 1063 aaKnown RBP12.9□□□□□ -0.34
ZNF548-201ENST00000336128 FAM43BQ6ZT52 329 aaPredicted RBP12.9□□□□□ -0.34
ZNF548-201ENST00000336128 CENPUQ71F23 418 aa12.9□□□□□ -0.34
ZNF548-201ENST00000336128 TAC4Q86UU9 113 aa12.9□□□□□ -0.34
ZNF548-201ENST00000336128 NPAS4Q8IUM7 802 aa12.9□□□□□ -0.34
ZNF548-201ENST00000336128 ARFGAP2Q8N6H7 521 aa12.9□□□□□ -0.34
ZNF548-201ENST00000336128 SCAMP5Q8TAC9 235 aa12.9□□□□□ -0.34
ZNF548-201ENST00000336128 LRRN4Q8WUT4 740 aa12.9□□□□□ -0.34
ZNF548-201ENST00000336128 COLEC11Q9BWP8 271 aa12.9□□□□□ -0.34
ZNF548-201ENST00000336128 HIPK3Q9H422 1215 aa12.9□□□□□ -0.34
ZNF548-201ENST00000336128 MARCH5Q9NX47 278 aa12.9□□□□□ -0.34
ZNF548-201ENST00000336128 ABI2Q9NYB9 513 aaPredicted RBP12.9□□□□□ -0.34
ZNF548-201ENST00000336128 PAK5Q9P286 719 aa12.9□□□□□ -0.34
ZNF548-201ENST00000336128 FBXW11Q9UKB1 542 aa12.9□□□□□ -0.34
ZNF548-201ENST00000336128 ADAM28Q9UKQ2 775 aa12.9□□□□□ -0.34
ZNF548-201ENST00000336128 HTTP42858 3142 aa12.9□□□□□ -0.34
ZNF548-201ENST00000336128 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.89□□□□□ -0.35
ZNF548-201ENST00000336128 TCRBV7S3A2A0A539 114 aa12.89□□□□□ -0.35
ZNF548-201ENST00000336128 SMAPO00193 183 aa12.89□□□□□ -0.35
ZNF548-201ENST00000336128 HOXA2O43364 376 aa12.89□□□□□ -0.35
ZNF548-201ENST00000336128 CREB3O43889 395 aa12.89□□□□□ -0.35
ZNF548-201ENST00000336128 ABHD2P08910 425 aa12.89□□□□□ -0.35
ZNF548-201ENST00000336128 ACTN2P35609 894 aa12.89□□□□□ -0.35
ZNF548-201ENST00000336128 SLC11A1P49279 550 aa12.89□□□□□ -0.35
ZNF548-201ENST00000336128 SLC5A3P53794 718 aa12.89□□□□□ -0.35
ZNF548-201ENST00000336128 CCL23P55773 120 aa12.89□□□□□ -0.35
ZNF548-201ENST00000336128 ARL4CP56559 192 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms