RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 RHOP08100 348 aa22.42■■□□□ 1.18
TPM1-204ENST00000334895 GJA1P17302 382 aa22.42■■□□□ 1.18
TPM1-204ENST00000334895 PCK1P35558 622 aa22.42■■□□□ 1.18
TPM1-204ENST00000334895 CYP4F8P98187 520 aa22.42■■□□□ 1.18
TPM1-204ENST00000334895 SLC5A9Q2M3M2 681 aa22.42■■□□□ 1.18
TPM1-204ENST00000334895 HECTD3Q5T447 861 aa22.42■■□□□ 1.18
TPM1-204ENST00000334895 SYCE2Q6PIF2 218 aa22.42■■□□□ 1.18
TPM1-204ENST00000334895 RSRC2Q7L4I2 434 aaKnown RBP22.42■■□□□ 1.18
TPM1-204ENST00000334895 GRASPQ7Z6J2 395 aaPredicted RBP22.42■■□□□ 1.18
TPM1-204ENST00000334895 TCEAL4Q96EI5 215 aa22.42■■□□□ 1.18
TPM1-204ENST00000334895 FAM204AQ9H8W3 233 aa22.42■■□□□ 1.18
TPM1-204ENST00000334895 DDIT4Q9NX09 232 aa22.42■■□□□ 1.18
TPM1-204ENST00000334895 COX16Q9P0S2 106 aa22.42■■□□□ 1.18
TPM1-204ENST00000334895 A0A1W2PRU2 124 aa22.41■■□□□ 1.18
TPM1-204ENST00000334895 KIF2AO00139 706 aaPredicted RBP22.41■■□□□ 1.18
TPM1-204ENST00000334895 DDX3YO15523 660 aaKnown RBP22.41■■□□□ 1.18
TPM1-204ENST00000334895 IRAK2O43187 625 aa22.41■■□□□ 1.18
TPM1-204ENST00000334895 COCHO43405 550 aa22.41■■□□□ 1.18
TPM1-204ENST00000334895 SLC34A2O95436 690 aa22.41■■□□□ 1.18
TPM1-204ENST00000334895 CTNNA1P35221 906 aaKnown RBP22.41■■□□□ 1.18
TPM1-204ENST00000334895 RDXP35241 583 aaKnown RBP22.41■■□□□ 1.18
TPM1-204ENST00000334895 TUBP50607 506 aa22.41■■□□□ 1.18
TPM1-204ENST00000334895 DEUP1Q05D60 604 aa22.41■■□□□ 1.18
TPM1-204ENST00000334895 EFEMP1Q12805 493 aa22.41■■□□□ 1.18
TPM1-204ENST00000334895 NME3Q13232 169 aa22.41■■□□□ 1.18
TPM1-204ENST00000334895 PABPC1LQ4VXU2 614 aaKnown RBP22.41■■□□□ 1.18
TPM1-204ENST00000334895 C10orf120Q5SQS8 335 aa22.41■■□□□ 1.18
TPM1-204ENST00000334895 ANKRD54Q6NXT1 300 aa22.41■■□□□ 1.18
TPM1-204ENST00000334895 MAFAQ8NHW3 353 aaPredicted RBP22.41■■□□□ 1.18
TPM1-204ENST00000334895 SHKBP1Q8TBC3 707 aa22.41■■□□□ 1.18
TPM1-204ENST00000334895 SMG7Q92540 1137 aaKnown RBP22.41■■□□□ 1.18
TPM1-204ENST00000334895 NAPGQ99747 312 aaPredicted RBP22.41■■□□□ 1.18
TPM1-204ENST00000334895 CLEC1BQ9P126 229 aa22.41■■□□□ 1.18
TPM1-204ENST00000334895 PCSK1NQ9UHG2 260 aa22.41■■□□□ 1.18
TPM1-204ENST00000334895 CTNNA2P26232 953 aa22.4■■□□□ 1.18
TPM1-204ENST00000334895 CDC25CP30307 473 aa22.4■■□□□ 1.18
TPM1-204ENST00000334895 CTC1Q2NKJ3 1217 aa22.4■■□□□ 1.18
TPM1-204ENST00000334895 PRSS36Q5K4E3 855 aa22.4■■□□□ 1.18
TPM1-204ENST00000334895 RARS2Q5T160 578 aaKnown RBP22.4■■□□□ 1.18
TPM1-204ENST00000334895 STXBP5Q5T5C0 1151 aa22.4■■□□□ 1.18
TPM1-204ENST00000334895 TXNDC8Q6A555 127 aa22.4■■□□□ 1.18
TPM1-204ENST00000334895 FAM131BQ86XD5 332 aa22.4■■□□□ 1.18
TPM1-204ENST00000334895 ALG3Q92685 438 aa22.4■■□□□ 1.18
TPM1-204ENST00000334895 RNF38Q9H0F5 515 aa22.4■■□□□ 1.18
TPM1-204ENST00000334895 OLA1Q9NTK5 396 aaKnown RBP22.4■■□□□ 1.18
TPM1-204ENST00000334895 USP18Q9UMW8 372 aa22.4■■□□□ 1.18
TPM1-204ENST00000334895 TBX10O75333 385 aa22.39■■□□□ 1.18
TPM1-204ENST00000334895 TUBB4AP04350 444 aa22.39■■□□□ 1.18
TPM1-204ENST00000334895 SSR1P43307 286 aaKnown RBP22.39■■□□□ 1.18
TPM1-204ENST00000334895 PEX5P50542 639 aa22.39■■□□□ 1.18
TPM1-204ENST00000334895 DNA2P51530 1060 aa22.39■■□□□ 1.18
TPM1-204ENST00000334895 DLX2Q07687 328 aaPredicted RBP22.39■■□□□ 1.18
TPM1-204ENST00000334895 COL19A1Q14993 1142 aa22.39■■□□□ 1.18
TPM1-204ENST00000334895 ATP13A4Q4VNC1 1196 aa22.39■■□□□ 1.18
TPM1-204ENST00000334895 KLHDC10Q6PID8 442 aa22.39■■□□□ 1.18
TPM1-204ENST00000334895 SLC22A12Q96S37 553 aa22.39■■□□□ 1.18
TPM1-204ENST00000334895 APOL5Q9BWW9 433 aa22.39■■□□□ 1.18
TPM1-204ENST00000334895 ATXN3LQ9H3M9 355 aa22.39■■□□□ 1.18
TPM1-204ENST00000334895 ANLNQ9NQW6 1124 aa22.39■■□□□ 1.18
TPM1-204ENST00000334895 MARCH2Q9P0N8 246 aa22.39■■□□□ 1.18
TPM1-204ENST00000334895 CDH22Q9UJ99 828 aa22.39■■□□□ 1.18
TPM1-204ENST00000334895 RASAL2Q9UJF2 1139 aa22.39■■□□□ 1.18
TPM1-204ENST00000334895 CTAGE9A4FU28 777 aa22.39■■□□□ 1.17
TPM1-204ENST00000334895 I6L893 689 aaPredicted RBP22.39■■□□□ 1.17
TPM1-204ENST00000334895 OLFM2O95897 454 aa22.39■■□□□ 1.17
TPM1-204ENST00000334895 CASQ1P31415 396 aa22.39■■□□□ 1.17
TPM1-204ENST00000334895 CXCR3P49682 368 aa22.39■■□□□ 1.17
TPM1-204ENST00000334895 RPS6KA1Q15418 735 aa22.39■■□□□ 1.17
TPM1-204ENST00000334895 LRRC38Q5VT99 294 aa22.39■■□□□ 1.17
TPM1-204ENST00000334895 SCYL2Q6P3W7 929 aa22.39■■□□□ 1.17
TPM1-204ENST00000334895 PDZD4Q76G19 769 aaPredicted RBP22.39■■□□□ 1.17
TPM1-204ENST00000334895 RHOT1Q8IXI2 618 aa22.39■■□□□ 1.17
TPM1-204ENST00000334895 CCDC185Q8N715 623 aa22.39■■□□□ 1.17
TPM1-204ENST00000334895 LEMD2Q8NC56 503 aa22.39■■□□□ 1.17
TPM1-204ENST00000334895 SERPINB11Q96P15 392 aa22.39■■□□□ 1.17
TPM1-204ENST00000334895 CDK5RAP1Q96SZ6 601 aaKnown RBP22.39■■□□□ 1.17
TPM1-204ENST00000334895 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.39■■□□□ 1.17
TPM1-204ENST00000334895 PCDHA3Q9Y5H8 950 aa22.39■■□□□ 1.17
TPM1-204ENST00000334895 MIF4GDA9UHW6 222 aaKnown RBP22.38■■□□□ 1.17
TPM1-204ENST00000334895 PSTPIP1O43586 416 aa22.38■■□□□ 1.17
TPM1-204ENST00000334895 DESP17661 470 aa22.38■■□□□ 1.17
TPM1-204ENST00000334895 GJC1P36383 396 aa22.38■■□□□ 1.17
TPM1-204ENST00000334895 ATP5C1P36542 298 aaKnown RBP22.38■■□□□ 1.17
TPM1-204ENST00000334895 SMTNL2Q2TAL5 461 aa22.38■■□□□ 1.17
TPM1-204ENST00000334895 DCAF12L1Q5VU92 463 aa22.38■■□□□ 1.17
TPM1-204ENST00000334895 PAPD7Q5XG87 772 aaKnown RBP22.38■■□□□ 1.17
TPM1-204ENST00000334895 GPR149Q86SP6 731 aa22.38■■□□□ 1.17
TPM1-204ENST00000334895 MIB1Q86YT6 1006 aa22.38■■□□□ 1.17
TPM1-204ENST00000334895 ZNF592Q92610 1267 aa22.38■■□□□ 1.17
TPM1-204ENST00000334895 MRPS31Q92665 395 aaKnown RBP22.38■■□□□ 1.17
TPM1-204ENST00000334895 ACSF2Q96CM8 615 aaPredicted RBP22.38■■□□□ 1.17
TPM1-204ENST00000334895 SLC39A13Q96H72 371 aa22.38■■□□□ 1.17
TPM1-204ENST00000334895 CYP2S1Q96SQ9 504 aa22.38■■□□□ 1.17
TPM1-204ENST00000334895 ZWILCHQ9H900 591 aa22.38■■□□□ 1.17
TPM1-204ENST00000334895 PIDD1Q9HB75 910 aa22.38■■□□□ 1.17
TPM1-204ENST00000334895 TRPC7Q9HCX4 862 aa22.38■■□□□ 1.17
TPM1-204ENST00000334895 TMPRSS4Q9NRS4 437 aa22.38■■□□□ 1.17
TPM1-204ENST00000334895 DNMT3LQ9UJW3 386 aa22.38■■□□□ 1.17
TPM1-204ENST00000334895 CCDC66A2RUB6 948 aa22.37■■□□□ 1.17
TPM1-204ENST00000334895 PRPSAP2O60256 369 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms