RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 MZT2AQ6P582 158 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 UGT2B28Q9BY64 529 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 NCKIPSDQ9NZQ3 722 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 RPS6KB2Q9UBS0 482 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 MTSS1O43312 755 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 KRT36O76013 467 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 SERPINE1P05121 402 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 S100A6P06703 90 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 VIL1P09327 827 aaKnown RBP10.07□□□□□ -0.8
COL4A6-201ENST00000334504 IRF1P10914 325 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 GALK1P51570 392 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 GEMP55040 296 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 NR1H2P55055 460 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 MCL1Q07820 350 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 TOP3AQ13472 1001 aaPredicted RBP10.07□□□□□ -0.8
COL4A6-201ENST00000334504 ITGA9Q13797 1035 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 TFDP3Q5H9I0 405 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 GPR107Q5VW38 600 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 SDE2Q6IQ49 451 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 CCNJLQ8IV13 435 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 BLOC1S5Q8TDH9 187 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 APOPT1Q96IL0 206 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 NDNQ99608 321 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 CRLS1Q9UJA2 301 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 PLAGL2Q9UPG8 496 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 TELO2Q9Y4R8 837 aa10.07□□□□□ -0.8
COL4A6-201ENST00000334504 TMEM94Q12767 1356 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 AATKQ6ZMQ8 1374 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 ADGBQ8N7X0 1667 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 EIF3DO15371 548 aaKnown RBP eCLIP10.06□□□□□ -0.8
COL4A6-201ENST00000334504 BBOX1O75936 387 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 MPOP05164 745 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 RARBP10826 455 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 DBTP11182 482 aaKnown RBP10.06□□□□□ -0.8
COL4A6-201ENST00000334504 LBPP18428 481 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 BCAP31P51572 246 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 KCNJ2P63252 427 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 SUSD4Q5VX71 490 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 CWF19L1Q69YN2 538 aaKnown RBP10.06□□□□□ -0.8
COL4A6-201ENST00000334504 TMED8Q6PL24 325 aaPredicted RBP10.06□□□□□ -0.8
COL4A6-201ENST00000334504 SRP68Q9UHB9 627 aaKnown RBP10.06□□□□□ -0.8
COL4A6-201ENST00000334504 PCDHGA3Q9Y5H0 932 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 CCDC154A6NI56 674 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 SLC2A4P14672 509 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 RPL5P46777 297 aaKnown RBP10.06□□□□□ -0.8
COL4A6-201ENST00000334504 BROXQ5VW32 411 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 SLC25A24Q6NUK1 477 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 HDAC7Q8WUI4 952 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 KIAA1683Q9H0B3 1180 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 LRRC40Q9H9A6 602 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 THAP1Q9NVV9 213 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 ANPEPP15144 967 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 SNX17Q15036 470 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 C16orf62Q7Z3J2 963 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 LRRC17Q8N6Y2 441 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 ZNF614Q8N883 585 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 ENGASEQ8NFI3 743 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 BPIFB6Q8NFQ5 453 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 S100ZQ8WXG8 99 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 CCDC59Q9P031 241 aaKnown RBP10.06□□□□□ -0.8
COL4A6-201ENST00000334504 PADI4Q9UM07 663 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 IGSF1Q8N6C5 1336 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 ZNF335Q9H4Z2 1342 aaPredicted RBP10.06□□□□□ -0.8
COL4A6-201ENST00000334504 SPATA31E1Q6ZUB1 1445 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 AP5Z1O43299 807 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 ATP6V1C1P21283 382 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 TTKP33981 857 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 ACADSBP45954 432 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 NDUFAF6Q330K2 333 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 GLRA4Q5JXX5 417 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 DENND5AQ6IQ26 1287 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 ERAP2Q6P179 960 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 CRELD2Q6UXH1 353 aaPredicted RBP10.06□□□□□ -0.8
COL4A6-201ENST00000334504 PDCD10Q9BUL8 212 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 VTI1BQ9UEU0 232 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 RAD54BQ9Y620 910 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 RBP1P09455 135 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 CCNA2P20248 432 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 EN1Q05925 392 aaPredicted RBP10.06□□□□□ -0.8
COL4A6-201ENST00000334504 CPSF1Q10570 1443 aaKnown RBP10.06□□□□□ -0.8
COL4A6-201ENST00000334504 SLC5A9Q2M3M2 681 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 MRNIPQ6NTE8 343 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 ZFYVE16Q7Z3T8 1539 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 PROSER1Q86XN7 944 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 MAGEE2Q8TD90 523 aaPredicted RBP10.06□□□□□ -0.8
COL4A6-201ENST00000334504 NT5C1AQ9BXI3 368 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 LACRTQ9GZZ8 138 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 JMJD4Q9H9V9 463 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 GDF3Q9NR23 364 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 TRMT13Q9NUP7 481 aaKnown RBP10.06□□□□□ -0.8
COL4A6-201ENST00000334504 NMRK1Q9NWW6 199 aa10.06□□□□□ -0.8
COL4A6-201ENST00000334504 MGAT4DA6NG13 374 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 H7C0S8 307 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 DCXO43602 365 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 VPS26AO75436 327 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 PCNAP12004 261 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 ZNF37AP17032 561 aaPredicted RBP10.05□□□□□ -0.8
COL4A6-201ENST00000334504 DSG3P32926 999 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 SKIV2L2P42285 1042 aaKnown RBP10.05□□□□□ -0.8
COL4A6-201ENST00000334504 YTHDF3Q7Z739 585 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms