RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 TIFABQ6ZNK6 161 aa16.81■□□□□ 0.28
UPK3B-202ENST00000334348 GAB3Q8WWW8 586 aa16.81■□□□□ 0.28
UPK3B-202ENST00000334348 CGRRF1Q99675 332 aa16.81■□□□□ 0.28
UPK3B-202ENST00000334348 DNAJC28Q9NX36 388 aa16.81■□□□□ 0.28
UPK3B-202ENST00000334348 LYPLA1O75608 230 aaPredicted RBP16.81■□□□□ 0.28
UPK3B-202ENST00000334348 OSBPP22059 807 aa16.81■□□□□ 0.28
UPK3B-202ENST00000334348 GABRB2P47870 512 aa16.81■□□□□ 0.28
UPK3B-202ENST00000334348 SLC1A6P48664 564 aa16.81■□□□□ 0.28
UPK3B-202ENST00000334348 IDH3AP50213 366 aa16.81■□□□□ 0.28
UPK3B-202ENST00000334348 NOMO1Q15155 1222 aa16.81■□□□□ 0.28
UPK3B-202ENST00000334348 JOSD2Q8TAC2 188 aa16.81■□□□□ 0.28
UPK3B-202ENST00000334348 DDI1Q8WTU0 396 aa16.81■□□□□ 0.28
UPK3B-202ENST00000334348 TFB1MQ8WVM0 346 aaKnown RBP16.81■□□□□ 0.28
UPK3B-202ENST00000334348 KCNK16Q96T55 309 aa16.81■□□□□ 0.28
UPK3B-202ENST00000334348 MMP19Q99542 508 aa16.81■□□□□ 0.28
UPK3B-202ENST00000334348 SENP6Q9GZR1 1112 aaPredicted RBP16.81■□□□□ 0.28
UPK3B-202ENST00000334348 PDLIM7Q9NR12 457 aa16.81■□□□□ 0.28
UPK3B-202ENST00000334348 ZNF277Q9NRM2 450 aaPredicted RBP16.81■□□□□ 0.28
UPK3B-202ENST00000334348 RAB6BQ9NRW1 208 aa16.81■□□□□ 0.28
UPK3B-202ENST00000334348 PAK5Q9P286 719 aa16.81■□□□□ 0.28
UPK3B-202ENST00000334348 CCPG1Q9ULG6 757 aa16.81■□□□□ 0.28
UPK3B-202ENST00000334348 PCDHGC3Q9UN70 934 aa16.81■□□□□ 0.28
UPK3B-202ENST00000334348 TTC36A6NLP5 189 aa16.8■□□□□ 0.28
UPK3B-202ENST00000334348 PRDX6P30041 224 aa16.8■□□□□ 0.28
UPK3B-202ENST00000334348 SERPINB9P50453 376 aa16.8■□□□□ 0.28
UPK3B-202ENST00000334348 EMP3P54852 163 aa16.8■□□□□ 0.28
UPK3B-202ENST00000334348 DCTN2Q13561 401 aaKnown RBP16.8■□□□□ 0.28
UPK3B-202ENST00000334348 CNGA3Q16281 694 aa16.8■□□□□ 0.28
UPK3B-202ENST00000334348 USP41Q3LFD5 358 aa16.8■□□□□ 0.28
UPK3B-202ENST00000334348 MAVSQ7Z434 540 aa16.8■□□□□ 0.28
UPK3B-202ENST00000334348 CAND1Q86VP6 1230 aaKnown RBP16.8■□□□□ 0.28
UPK3B-202ENST00000334348 MCPH1Q8NEM0 835 aa16.8■□□□□ 0.28
UPK3B-202ENST00000334348 DIS3LQ8TF46 1054 aaKnown RBP16.8■□□□□ 0.28
UPK3B-202ENST00000334348 CSRNP1Q96S65 589 aa16.8■□□□□ 0.28
UPK3B-202ENST00000334348 GRIP2Q9C0E4 1043 aa16.8■□□□□ 0.28
UPK3B-202ENST00000334348 FBXO28Q9NVF7 368 aa16.8■□□□□ 0.28
UPK3B-202ENST00000334348 FEM1BQ9UK73 627 aa16.8■□□□□ 0.28
UPK3B-202ENST00000334348 NFKBIEO00221 500 aa16.8■□□□□ 0.28
UPK3B-202ENST00000334348 NFIBO00712 420 aa16.8■□□□□ 0.28
UPK3B-202ENST00000334348 ICAM1P05362 532 aa16.8■□□□□ 0.28
UPK3B-202ENST00000334348 FGF3P11487 239 aaPredicted RBP16.8■□□□□ 0.28
UPK3B-202ENST00000334348 MROH9Q5TGP6 573 aa16.8■□□□□ 0.28
UPK3B-202ENST00000334348 PDPK2PQ6A1A2 396 aa16.8■□□□□ 0.28
UPK3B-202ENST00000334348 TMEM126BQ8IUX1 230 aa16.8■□□□□ 0.28
UPK3B-202ENST00000334348 OR5B17Q8NGF7 314 aa16.8■□□□□ 0.28
UPK3B-202ENST00000334348 LRRC39Q96DD0 335 aa16.8■□□□□ 0.28
UPK3B-202ENST00000334348 RSAD1Q9HA92 442 aa16.8■□□□□ 0.28
UPK3B-202ENST00000334348 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.8■□□□□ 0.28
UPK3B-202ENST00000334348 FAM159BA6NKW6 160 aa16.79■□□□□ 0.28
UPK3B-202ENST00000334348 DGAT1O75907 488 aa16.79■□□□□ 0.28
UPK3B-202ENST00000334348 CRTAMO95727 393 aa16.79■□□□□ 0.28
UPK3B-202ENST00000334348 ALOX15P16050 662 aaPredicted RBP16.79■□□□□ 0.28
UPK3B-202ENST00000334348 POLR2BP30876 1174 aaKnown RBP16.79■□□□□ 0.28
UPK3B-202ENST00000334348 CREB5Q02930 508 aa16.79■□□□□ 0.28
UPK3B-202ENST00000334348 NPNTQ6UXI9 565 aa16.79■□□□□ 0.28
UPK3B-202ENST00000334348 FRMD7Q6ZUT3 714 aa16.79■□□□□ 0.28
UPK3B-202ENST00000334348 PODNQ7Z5L7 613 aa16.79■□□□□ 0.28
UPK3B-202ENST00000334348 RDM1Q8NG50 284 aa16.79■□□□□ 0.28
UPK3B-202ENST00000334348 CLEC4DQ8WXI8 215 aa16.79■□□□□ 0.28
UPK3B-202ENST00000334348 CLMNQ96JQ2 1002 aa16.79■□□□□ 0.28
UPK3B-202ENST00000334348 IMPG2Q9BZV3 1241 aa16.79■□□□□ 0.28
UPK3B-202ENST00000334348 HAPLN2Q9GZV7 340 aa16.79■□□□□ 0.28
UPK3B-202ENST00000334348 XPNPEP1Q9NQW7 623 aa16.79■□□□□ 0.28
UPK3B-202ENST00000334348 HOMER2Q9NSB8 354 aa16.79■□□□□ 0.28
UPK3B-202ENST00000334348 ARHGAP26Q9UNA1 814 aa16.79■□□□□ 0.28
UPK3B-202ENST00000334348 SLC15A5A6NIM6 579 aa16.79■□□□□ 0.28
UPK3B-202ENST00000334348 ADCY3O60266 1144 aa16.79■□□□□ 0.28
UPK3B-202ENST00000334348 FBXO21O94952 628 aa16.79■□□□□ 0.28
UPK3B-202ENST00000334348 SERPINB8P50452 374 aa16.79■□□□□ 0.28
UPK3B-202ENST00000334348 HDAC4P56524 1084 aa16.79■□□□□ 0.28
UPK3B-202ENST00000334348 FKBP1AP62942 108 aaKnown RBP16.79■□□□□ 0.28
UPK3B-202ENST00000334348 MYBPC1Q00872 1141 aa16.79■□□□□ 0.28
UPK3B-202ENST00000334348 CNTN2Q02246 1040 aa16.79■□□□□ 0.28
UPK3B-202ENST00000334348 GHRHRQ02643 423 aa16.79■□□□□ 0.28
UPK3B-202ENST00000334348 APOFQ13790 326 aa16.79■□□□□ 0.28
UPK3B-202ENST00000334348 KRT81Q14533 505 aa16.79■□□□□ 0.28
UPK3B-202ENST00000334348 GPR162Q16538 588 aa16.79■□□□□ 0.28
UPK3B-202ENST00000334348 UNC5AQ6ZN44 842 aa16.79■□□□□ 0.28
UPK3B-202ENST00000334348 MCF2L2Q86YR7 1114 aa16.79■□□□□ 0.28
UPK3B-202ENST00000334348 EFCAB3Q8N7B9 438 aa16.79■□□□□ 0.28
UPK3B-202ENST00000334348 GFM2Q969S9 779 aaKnown RBP16.79■□□□□ 0.28
UPK3B-202ENST00000334348 CALN1Q9BXU9 219 aa16.79■□□□□ 0.28
UPK3B-202ENST00000334348 SHCBP1LQ9BZQ2 653 aa16.79■□□□□ 0.28
UPK3B-202ENST00000334348 THEGQ9P2T0 379 aa16.79■□□□□ 0.28
UPK3B-202ENST00000334348 PCSK1NQ9UHG2 260 aa16.79■□□□□ 0.28
UPK3B-202ENST00000334348 HERC5Q9UII4 1024 aaKnown RBP16.79■□□□□ 0.28
UPK3B-202ENST00000334348 AP4B1Q9Y6B7 739 aa16.79■□□□□ 0.28
UPK3B-202ENST00000334348 CNTNAP2Q9UHC6 1331 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 STBD1O95210 358 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 TOP3BO95985 862 aaKnown RBP16.78■□□□□ 0.28
UPK3B-202ENST00000334348 LDHAP00338 332 aaKnown RBP16.78■□□□□ 0.28
UPK3B-202ENST00000334348 SRGAP2CP0DJJ0 459 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 SRGAP2BP0DMP2 458 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 TAF5Q15542 800 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 RARS2Q5T160 578 aaKnown RBP16.78■□□□□ 0.28
UPK3B-202ENST00000334348 LRRC43Q8N309 656 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 CATSPER1Q8NEC5 780 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 TDRD3Q9H7E2 651 aaKnown RBP16.78■□□□□ 0.28
UPK3B-202ENST00000334348 CYP26B1Q9NR63 512 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 SERPINA10Q9UK55 444 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms