RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 ZNF143P52747 638 aaPredicted RBP11.58□□□□□ -0.56
POLR1B-202ENST00000333990 MBTD1Q05BQ5 628 aa11.58□□□□□ -0.56
POLR1B-202ENST00000333990 CCL14Q16627 93 aa11.58□□□□□ -0.56
POLR1B-202ENST00000333990 NLRP9Q7RTR0 991 aa11.58□□□□□ -0.56
POLR1B-202ENST00000333990 LRRC49Q8IUZ0 686 aa11.58□□□□□ -0.56
POLR1B-202ENST00000333990 TSEN34Q9BSV6 310 aaKnown RBP11.58□□□□□ -0.56
POLR1B-202ENST00000333990 UBE2OQ9C0C9 1292 aaKnown RBP11.58□□□□□ -0.56
POLR1B-202ENST00000333990 FZD8Q9H461 694 aa11.58□□□□□ -0.56
POLR1B-202ENST00000333990 IGFLR1Q9H665 355 aa11.58□□□□□ -0.56
POLR1B-202ENST00000333990 MRPL40Q9NQ50 206 aaKnown RBP11.58□□□□□ -0.56
POLR1B-202ENST00000333990 XPO1O14980 1071 aaKnown RBP11.57□□□□□ -0.56
POLR1B-202ENST00000333990 EIF3HO15372 352 aaKnown RBP eCLIP11.57□□□□□ -0.56
POLR1B-202ENST00000333990 ATP5HO75947 161 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 APOA4P06727 396 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 CDC25CP30307 473 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 KCNMA1Q12791 1236 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 ZNF792Q3KQV3 632 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 SAPCD2Q86UD0 394 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 FAM35AQ86V20 835 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 MON1AQ86VX9 555 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 PDCD7Q8N8D1 485 aaKnown RBP11.57□□□□□ -0.56
POLR1B-202ENST00000333990 FAM167BQ9BTA0 163 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 Q9H521 79 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 PKD2L2Q9NZM6 624 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 SEPT3Q9UH03 358 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 TXNDC9O14530 226 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 MAP3K6O95382 1288 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 OR1D2P34982 312 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 SMAD1Q15797 465 aaKnown RBP11.57□□□□□ -0.56
POLR1B-202ENST00000333990 FAXCQ5TGI0 409 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 KATNAL2Q8IYT4 538 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 NOA1Q8NC60 698 aaKnown RBP11.57□□□□□ -0.56
POLR1B-202ENST00000333990 DUSP16Q9BY84 665 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 L2HGDHQ9H9P8 463 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 CREBZFQ9NS37 354 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 RNF19AQ9NV58 838 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 GTF2IRD1Q9UHL9 959 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 SHOC2Q9UQ13 582 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 HEATR9A2RTY3 570 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 APOC4-APOC2K7ER74 178 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 OPLAHO14841 1288 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 SYN3O14994 580 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 RHOBTB1O94844 696 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 IGSF6O95976 241 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 APOC2P02655 101 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 HNRNPH3P31942 346 aaKnown RBP11.57□□□□□ -0.56
POLR1B-202ENST00000333990 BRCC3P46736 316 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 SCNN1BP51168 640 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 ARFIP2P53365 341 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 JAG1P78504 1218 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 MAPRE2Q15555 327 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 PKN2Q16513 984 aaKnown RBP11.57□□□□□ -0.56
POLR1B-202ENST00000333990 FAM83EQ2M2I3 478 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 CCDC38Q502W7 563 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 TTC39BQ5VTQ0 682 aaPredicted RBP11.57□□□□□ -0.56
POLR1B-202ENST00000333990 TGS1Q96RS0 853 aaKnown RBP11.57□□□□□ -0.56
POLR1B-202ENST00000333990 PRKD2Q9BZL6 878 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 EPC1Q9H2F5 836 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 CPSF2Q9P2I0 782 aaKnown RBP11.57□□□□□ -0.56
POLR1B-202ENST00000333990 PCDHGB4Q9UN71 923 aa11.57□□□□□ -0.56
POLR1B-202ENST00000333990 RBAK-RBAKDNI3L0D1 243 aa11.56□□□□□ -0.56
POLR1B-202ENST00000333990 AGBL2Q5U5Z8 902 aa11.56□□□□□ -0.56
POLR1B-202ENST00000333990 EFL1Q7Z2Z2 1120 aaKnown RBP11.56□□□□□ -0.56
POLR1B-202ENST00000333990 METTL3Q86U44 580 aaKnown RBP11.56□□□□□ -0.56
POLR1B-202ENST00000333990 DBF4BQ8NFT6 615 aa11.56□□□□□ -0.56
POLR1B-202ENST00000333990 WWP1Q9H0M0 922 aa11.56□□□□□ -0.56
POLR1B-202ENST00000333990 LHX5Q9H2C1 402 aa11.56□□□□□ -0.56
POLR1B-202ENST00000333990 STN1Q9H668 368 aaKnown RBP11.56□□□□□ -0.56
POLR1B-202ENST00000333990 TASP1Q9H6P5 420 aa11.56□□□□□ -0.56
POLR1B-202ENST00000333990 ACTR5Q9H9F9 607 aaPredicted RBP11.56□□□□□ -0.56
POLR1B-202ENST00000333990 TMEM161AQ9NX61 479 aa11.56□□□□□ -0.56
POLR1B-202ENST00000333990 GMNCA6NCL1 334 aa11.56□□□□□ -0.56
POLR1B-202ENST00000333990 CCDC22O60826 627 aa11.56□□□□□ -0.56
POLR1B-202ENST00000333990 VPS26AO75436 327 aa11.56□□□□□ -0.56
POLR1B-202ENST00000333990 BAG2O95816 211 aa11.56□□□□□ -0.56
POLR1B-202ENST00000333990 ACADMP11310 421 aa11.56□□□□□ -0.56
POLR1B-202ENST00000333990 VCLP18206 1134 aa11.56□□□□□ -0.56
POLR1B-202ENST00000333990 NOMO3P69849 1222 aa11.56□□□□□ -0.56
POLR1B-202ENST00000333990 LBRQ14739 615 aaKnown RBP11.56□□□□□ -0.56
POLR1B-202ENST00000333990 PSRC1Q6PGN9 363 aaPredicted RBP11.56□□□□□ -0.56
POLR1B-202ENST00000333990 ILDR2Q71H61 639 aa11.56□□□□□ -0.56
POLR1B-202ENST00000333990 TFAP2DQ7Z6R9 452 aa11.56□□□□□ -0.56
POLR1B-202ENST00000333990 COLGALT1Q8NBJ5 622 aa11.56□□□□□ -0.56
POLR1B-202ENST00000333990 NPLOC4Q8TAT6 608 aa11.56□□□□□ -0.56
POLR1B-202ENST00000333990 HTR3CQ8WXA8 447 aa11.56□□□□□ -0.56
POLR1B-202ENST00000333990 LENG1Q96BZ8 264 aaPredicted RBP11.56□□□□□ -0.56
POLR1B-202ENST00000333990 TMEM121Q9BTD3 319 aa11.56□□□□□ -0.56
POLR1B-202ENST00000333990 SPATA16Q9BXB7 569 aa11.56□□□□□ -0.56
POLR1B-202ENST00000333990 SLC7A5P2Q9GIP4 190 aa11.56□□□□□ -0.56
POLR1B-202ENST00000333990 UBA2Q9UBT2 640 aaPredicted RBP11.56□□□□□ -0.56
POLR1B-202ENST00000333990 TRMT6Q9UJA5 497 aaKnown RBP11.56□□□□□ -0.56
POLR1B-202ENST00000333990 DIAPH2O60879 1101 aa11.56□□□□□ -0.56
POLR1B-202ENST00000333990 SYF2O95926 243 aaKnown RBP11.56□□□□□ -0.56
POLR1B-202ENST00000333990 RARGP13631 454 aa11.56□□□□□ -0.56
POLR1B-202ENST00000333990 WEE1P30291 646 aa11.56□□□□□ -0.56
POLR1B-202ENST00000333990 MAPK8P45983 427 aa11.56□□□□□ -0.56
POLR1B-202ENST00000333990 PLA2G4AP47712 749 aa11.56□□□□□ -0.56
POLR1B-202ENST00000333990 POLR2LP62875 67 aaKnown RBP11.56□□□□□ -0.56
POLR1B-202ENST00000333990 CDH17Q12864 832 aa11.56□□□□□ -0.56
POLR1B-202ENST00000333990 MKRN4PQ13434 485 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms