RNA–Protein interactions for RNA: ENST00000331493.6

EFCAB13-201, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EFCAB13, Length 3,931 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-201ENST00000331493 CCDC142Q17RM4 750 aa12.21□□□□□ -0.45
EFCAB13-201ENST00000331493 RBM15BQ8NDT2 890 aaKnown RBP12.21□□□□□ -0.45
EFCAB13-201ENST00000331493 VCXQ9H320 206 aa12.21□□□□□ -0.45
EFCAB13-201ENST00000331493 SMARCAD1Q9H4L7 1026 aa12.21□□□□□ -0.45
EFCAB13-201ENST00000331493 SCOCQ9UIL1 159 aa12.21□□□□□ -0.45
EFCAB13-201ENST00000331493 ERVK-10P10266 1014 aa12.21□□□□□ -0.45
EFCAB13-201ENST00000331493 MGAT1P26572 445 aa12.21□□□□□ -0.45
EFCAB13-201ENST00000331493 MSX2P35548 267 aaPredicted RBP12.21□□□□□ -0.45
EFCAB13-201ENST00000331493 CCDC15Q0P6D6 951 aa12.21□□□□□ -0.45
EFCAB13-201ENST00000331493 FASTKD1Q53R41 847 aaKnown RBP12.21□□□□□ -0.45
EFCAB13-201ENST00000331493 PPP1R15BQ5SWA1 713 aa12.21□□□□□ -0.45
EFCAB13-201ENST00000331493 N4BP2L1Q5TBK1 243 aaPredicted RBP12.21□□□□□ -0.45
EFCAB13-201ENST00000331493 RNF220Q5VTB9 566 aa12.21□□□□□ -0.45
EFCAB13-201ENST00000331493 RAPH1Q70E73 1250 aa12.21□□□□□ -0.45
EFCAB13-201ENST00000331493 SDCCAG8Q86SQ7 713 aaPredicted RBP12.21□□□□□ -0.45
EFCAB13-201ENST00000331493 C18orf25Q96B23 403 aaPredicted RBP12.21□□□□□ -0.45
EFCAB13-201ENST00000331493 WWP1Q9H0M0 922 aa12.21□□□□□ -0.45
EFCAB13-201ENST00000331493 CXCL16Q9H2A7 254 aa12.21□□□□□ -0.45
EFCAB13-201ENST00000331493 BARX2Q9UMQ3 279 aaPredicted RBP12.21□□□□□ -0.45
EFCAB13-201ENST00000331493 PCDHGC3Q9UN70 934 aa12.21□□□□□ -0.45
EFCAB13-201ENST00000331493 APOBEC2Q9Y235 224 aaKnown RBP12.21□□□□□ -0.45
EFCAB13-201ENST00000331493 LRRC37AA6NMS7 1700 aa12.21□□□□□ -0.45
EFCAB13-201ENST00000331493 CILPO75339 1184 aa12.21□□□□□ -0.46
EFCAB13-201ENST00000331493 PSMG1O95456 288 aa12.21□□□□□ -0.46
EFCAB13-201ENST00000331493 APOEP02649 317 aa12.21□□□□□ -0.46
EFCAB13-201ENST00000331493 OAZ1P54368 228 aa12.21□□□□□ -0.46
EFCAB13-201ENST00000331493 SLC10A6Q3KNW5 377 aa12.21□□□□□ -0.46
EFCAB13-201ENST00000331493 FAM47CQ5HY64 1035 aa12.21□□□□□ -0.46
EFCAB13-201ENST00000331493 LRRC74BQ6ZQY2 392 aa12.21□□□□□ -0.46
EFCAB13-201ENST00000331493 TREML1Q86YW5 311 aa12.21□□□□□ -0.46
EFCAB13-201ENST00000331493 APOBEC3FQ8IUX4 373 aaKnown RBP12.21□□□□□ -0.46
EFCAB13-201ENST00000331493 RNF34Q969K3 372 aa12.21□□□□□ -0.46
EFCAB13-201ENST00000331493 DPEP3Q9H4B8 488 aa12.21□□□□□ -0.46
EFCAB13-201ENST00000331493 PCDH18Q9HCL0 1135 aa12.21□□□□□ -0.46
EFCAB13-201ENST00000331493 KLHL8Q9P2G9 620 aaPredicted RBP12.21□□□□□ -0.46
EFCAB13-201ENST00000331493 AP4E1Q9UPM8 1137 aa12.21□□□□□ -0.46
EFCAB13-201ENST00000331493 LTBP1Q14766 1721 aa12.21□□□□□ -0.46
EFCAB13-201ENST00000331493 COL4A5P29400 1685 aa12.21□□□□□ -0.46
EFCAB13-201ENST00000331493 KIF1CO43896 1103 aaKnown RBP12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 PIGRP01833 764 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 C6orf222P0C671 652 aaPredicted RBP12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 CYP2C8P10632 490 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 ALADP13716 330 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 GOT1P17174 413 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 BAG6P46379 1132 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 SARNPP82979 210 aaKnown RBP12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 CCDC14Q49A88 953 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 TCHHL1Q5QJ38 904 aaPredicted RBP12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 TRNP1Q6NT89 227 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 CMC1Q7Z7K0 106 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 RELL1Q8IUW5 271 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 SCUBE1Q8IWY4 988 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 RNF148Q8N7C7 305 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 RNF169Q8NCN4 708 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 SPDYE1Q8NFV5 336 aaPredicted RBP12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 CMASQ8NFW8 434 aaPredicted RBP12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 USP33Q8TEY7 942 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 CDKL2Q92772 493 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 SCYL1Q96KG9 808 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 GOLGA2P5Q9HBQ8 144 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 THSD7AQ9UPZ6 1657 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 E9PBE3 544 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 MAGEB2O15479 319 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 KLHL41O60662 606 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 TPH1P17752 444 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 TUBP50607 506 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 TARBP2Q15633 366 aaKnown RBP12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 GRAMD1BQ3KR37 738 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 BOLA3Q53S33 107 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 ANO7Q6IWH7 933 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 GBP5Q96PP8 586 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 DDNO94850 711 aaPredicted RBP12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 ADORA2AP29274 412 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 CUL3Q13618 768 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 ITGA9Q13797 1035 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 TTLL4Q14679 1199 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 WASHC2DQ5SRD0 308 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 IZUMO2Q6UXV1 221 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 STKLD1Q8NE28 680 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 GSTCDQ8NEC7 633 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 TMEM174Q8WUU8 243 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 AZIN2Q96A70 460 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 SNX25Q9H3E2 840 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 TXNRD2Q9NNW7 524 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 PRMT7Q9NVM4 692 aaPredicted RBP12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 CACNG4Q9UBN1 327 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 TEX264Q9Y6I9 313 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 RPS6KL1Q9Y6S9 549 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 ANKRD12Q6UB98 2062 aa12.2□□□□□ -0.46
EFCAB13-201ENST00000331493 DCAF8L1A6NGE4 600 aa12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 HBP1O60381 514 aa12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 GLRBP48167 497 aa12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 CELF3Q5SZQ8 465 aaKnown RBP12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 LBX2Q6XYB7 198 aa12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 DCPSQ96C86 337 aaKnown RBP12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 SAR1AQ9NR31 198 aa12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 PNPOQ9NVS9 261 aa12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 ERAP1Q9NZ08 941 aa12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 CNTN6Q9UQ52 1028 aa12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 TRIP11Q15643 1979 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms