RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 RAD51CO43502 376 aa9.9□□□□□ -0.82
C11orf54-201ENST00000331239 SLC2A3P11169 496 aa9.9□□□□□ -0.82
C11orf54-201ENST00000331239 RPL17P18621 184 aaKnown RBP9.9□□□□□ -0.82
C11orf54-201ENST00000331239 RGS7P49802 495 aa9.9□□□□□ -0.82
C11orf54-201ENST00000331239 CACNA2D1P54289 1103 aa9.9□□□□□ -0.82
C11orf54-201ENST00000331239 RNASE9P60153 205 aaKnown RBP9.9□□□□□ -0.82
C11orf54-201ENST00000331239 PPM1LQ5SGD2 360 aa9.9□□□□□ -0.82
C11orf54-201ENST00000331239 SCUBE3Q8IX30 993 aa9.9□□□□□ -0.82
C11orf54-201ENST00000331239 ACTRT1Q8TDG2 376 aa9.9□□□□□ -0.82
C11orf54-201ENST00000331239 ARHGEF26Q96DR7 871 aa9.9□□□□□ -0.82
C11orf54-201ENST00000331239 ZIM3Q96PE6 472 aa9.9□□□□□ -0.82
C11orf54-201ENST00000331239 SFXN1Q9H9B4 322 aa9.9□□□□□ -0.82
C11orf54-201ENST00000331239 TMEM30AQ9NV96 361 aa9.9□□□□□ -0.82
C11orf54-201ENST00000331239 ZNF197O14709 1029 aa9.9□□□□□ -0.83
C11orf54-201ENST00000331239 CEP104O60308 925 aa9.9□□□□□ -0.83
C11orf54-201ENST00000331239 C8AP07357 584 aa9.9□□□□□ -0.83
C11orf54-201ENST00000331239 LCP1P13796 627 aa9.9□□□□□ -0.83
C11orf54-201ENST00000331239 HMGA1P17096 107 aaKnown RBP9.9□□□□□ -0.83
C11orf54-201ENST00000331239 ATF6P18850 670 aa9.9□□□□□ -0.83
C11orf54-201ENST00000331239 CTNNA2P26232 953 aa9.9□□□□□ -0.83
C11orf54-201ENST00000331239 SDC4P31431 198 aa9.9□□□□□ -0.83
C11orf54-201ENST00000331239 HTR7P34969 479 aa9.9□□□□□ -0.83
C11orf54-201ENST00000331239 YWHAGP61981 247 aaKnown RBP eCLIP9.9□□□□□ -0.83
C11orf54-201ENST00000331239 CFAP58Q5T655 872 aa9.9□□□□□ -0.83
C11orf54-201ENST00000331239 BHLHA9Q7RTU4 235 aa9.9□□□□□ -0.83
C11orf54-201ENST00000331239 PEX26Q7Z412 305 aa9.9□□□□□ -0.83
C11orf54-201ENST00000331239 KLHL7Q8IXQ5 586 aa9.9□□□□□ -0.83
C11orf54-201ENST00000331239 PGLYRP2Q96PD5 576 aa9.9□□□□□ -0.83
C11orf54-201ENST00000331239 PRKD2Q9BZL6 878 aa9.9□□□□□ -0.83
C11orf54-201ENST00000331239 TRPM5Q9NZQ8 1165 aa9.9□□□□□ -0.83
C11orf54-201ENST00000331239 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.9□□□□□ -0.83
C11orf54-201ENST00000331239 DENND4CQ5VZ89 1909 aa9.9□□□□□ -0.83
C11orf54-201ENST00000331239 MYO16Q9Y6X6 1858 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 MYO1CO00159 1063 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 PSTPIP1O43586 416 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 RNF8O76064 485 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 FAM153BP0C7A2 387 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 PTPN2P17706 415 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 TWF1Q12792 350 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 TAF12Q16514 161 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 DDR2Q16832 855 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 HADHQ16836 314 aaKnown RBP9.89□□□□□ -0.83
C11orf54-201ENST00000331239 FAM153CQ494X1 144 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 BOLA3Q53S33 107 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 TTMPQ5BVD1 217 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 BTBD8Q5XKL5 378 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 DNAJB7Q7Z6W7 309 aaPredicted RBP9.89□□□□□ -0.83
C11orf54-201ENST00000331239 DNAAF5Q86Y56 855 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 TEKT4Q8WW24 435 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.89□□□□□ -0.83
C11orf54-201ENST00000331239 FBXO32Q969P5 355 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 AZIN2Q96A70 460 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 NPY6RQ99463 290 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 CRISPLD1Q9H336 500 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 FAM153AQ9UHL3 310 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 ANAPC7Q9UJX3 599 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 AMFRQ9UKV5 643 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 SLC27A5Q9Y2P5 690 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 IGLV3-25P01717 112 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 KRT7P08729 469 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 USP17L7P0C7H9 530 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 PDGFRAP16234 1089 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 RFC1P35251 1148 aaPredicted RBP9.89□□□□□ -0.83
C11orf54-201ENST00000331239 RING1Q06587 406 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 CYP4A22Q5TCH4 519 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 BSPRYQ5W0U4 402 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 EIF1ADQ8N9N8 165 aaKnown RBP9.89□□□□□ -0.83
C11orf54-201ENST00000331239 AUTS2Q8WXX7 1259 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 NTAN1Q96AB6 310 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 ARL8AQ96BM9 186 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 SERPINB11Q96P15 392 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 GCNAQ96QF7 691 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 CAPS2Q9BXY5 557 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 SMOC2Q9H3U7 446 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 METTL5Q9NRN9 209 aaKnown RBP9.89□□□□□ -0.83
C11orf54-201ENST00000331239 DDX56Q9NY93 547 aaKnown RBP9.89□□□□□ -0.83
C11orf54-201ENST00000331239 RSPH14Q9UHP6 348 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 COG5Q9UP83 839 aa9.89□□□□□ -0.83
C11orf54-201ENST00000331239 COLQQ9Y215 455 aaPredicted RBP9.89□□□□□ -0.83
C11orf54-201ENST00000331239 HBS1LQ9Y450 684 aaKnown RBP9.89□□□□□ -0.83
C11orf54-201ENST00000331239 CCDC188H7C350 402 aa9.88□□□□□ -0.83
C11orf54-201ENST00000331239 LATS1O95835 1130 aa9.88□□□□□ -0.83
C11orf54-201ENST00000331239 TCF3P15923 654 aa9.88□□□□□ -0.83
C11orf54-201ENST00000331239 IRS1P35568 1242 aa9.88□□□□□ -0.83
C11orf54-201ENST00000331239 IRAK1P51617 712 aa9.88□□□□□ -0.83
C11orf54-201ENST00000331239 EIF4EBP2Q13542 120 aaPredicted RBP9.88□□□□□ -0.83
C11orf54-201ENST00000331239 CUL1Q13616 776 aa9.88□□□□□ -0.83
C11orf54-201ENST00000331239 PPP2R5DQ14738 602 aa9.88□□□□□ -0.83
C11orf54-201ENST00000331239 BRMS1LQ5PSV4 323 aa9.88□□□□□ -0.83
C11orf54-201ENST00000331239 ZNF697Q5TEC3 545 aa9.88□□□□□ -0.83
C11orf54-201ENST00000331239 GPRIN1Q7Z2K8 1008 aa9.88□□□□□ -0.83
C11orf54-201ENST00000331239 IQCKQ8N0W5 287 aa9.88□□□□□ -0.83
C11orf54-201ENST00000331239 UBL4BQ8N7F7 174 aa9.88□□□□□ -0.83
C11orf54-201ENST00000331239 VN1R2Q8NFZ6 395 aa9.88□□□□□ -0.83
C11orf54-201ENST00000331239 SLC7A14Q8TBB6 771 aa9.88□□□□□ -0.83
C11orf54-201ENST00000331239 RXFP2Q8WXD0 754 aa9.88□□□□□ -0.83
C11orf54-201ENST00000331239 MCEEQ96PE7 176 aa9.88□□□□□ -0.83
C11orf54-201ENST00000331239 LRRC3Q9BY71 257 aa9.88□□□□□ -0.83
C11orf54-201ENST00000331239 MAN1C1Q9NR34 630 aa9.88□□□□□ -0.83
C11orf54-201ENST00000331239 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms