RNA–Protein interactions for RNA: ENST00000329245.8

TOP1MT-201, Transcript of DNA topoisomerase I mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1MT, Length 1,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-201ENST00000329245 HTRA4P83105 476 aaPredicted RBP22.55■■□□□ 1.2
TOP1MT-201ENST00000329245 KRT17Q04695 432 aa22.55■■□□□ 1.2
TOP1MT-201ENST00000329245 GSTA5Q7RTV2 222 aa22.55■■□□□ 1.2
TOP1MT-201ENST00000329245 SCD5Q86SK9 330 aa22.55■■□□□ 1.2
TOP1MT-201ENST00000329245 MON1AQ86VX9 555 aa22.55■■□□□ 1.2
TOP1MT-201ENST00000329245 SLCO2A1Q92959 643 aa22.55■■□□□ 1.2
TOP1MT-201ENST00000329245 SLC9A7Q96T83 725 aa22.55■■□□□ 1.2
TOP1MT-201ENST00000329245 ZNF670Q9BS34 389 aa22.55■■□□□ 1.2
TOP1MT-201ENST00000329245 ZNF148Q9UQR1 794 aa22.55■■□□□ 1.2
TOP1MT-201ENST00000329245 A0A1W2PQH9 124 aa22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 RTN3O95197 1032 aaPredicted RBP22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 GAS8O95995 478 aa22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 DNAJB2P25686 324 aa22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 YWHAQP27348 245 aa22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 PGFP49763 221 aa22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 OTUD4Q01804 1114 aaKnown RBP22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 LMNB2Q03252 620 aa22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 DUPD1Q68J44 220 aa22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 VSIG1Q86XK7 387 aa22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 PSTKQ8IV42 348 aaKnown RBP22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 PYROXD2Q8N2H3 581 aa22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 ACTL9Q8TC94 416 aa22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 RNF34Q969K3 372 aa22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 SPATA17Q96L03 361 aa22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 KCTD15Q96SI1 283 aaPredicted RBP22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 FAM114A2Q9NRY5 505 aa22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 SLC4A7Q9Y6M7 1214 aa22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 APOC4-APOC2K7ER74 178 aa22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 APOC2P02655 101 aa22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 ECHS1P30084 290 aa22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 GBP1P32455 592 aa22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 ARL13BQ3SXY8 428 aa22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 EFHC2Q5JST6 749 aa22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 DRICH1Q6PGQ1 229 aaPredicted RBP22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 TAC4Q86UU9 113 aa22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 EIF1ADQ8N9N8 165 aaKnown RBP22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 FAM71BQ8TC56 605 aa22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 DQX1Q8TE96 717 aaKnown RBP22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 GIPC2Q8TF65 315 aa22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 RNF139Q8WU17 664 aa22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 CAVIN3Q969G5 261 aa22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 WDCPQ9H6R7 721 aa22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 NMUR1Q9HB89 426 aa22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 WDR6Q9NNW5 1121 aaKnown RBP22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 TMPRSS4Q9NRS4 437 aa22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 MTMR10Q9NXD2 777 aa22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 SNX24Q9Y343 169 aa22.54■■□□□ 1.2
TOP1MT-201ENST00000329245 TUFMP49411 452 aaKnown RBP22.53■■□□□ 1.2
TOP1MT-201ENST00000329245 ARHGAP18Q8N392 663 aa22.53■■□□□ 1.2
TOP1MT-201ENST00000329245 ZNF461Q8TAF7 563 aa22.53■■□□□ 1.2
TOP1MT-201ENST00000329245 FBXO32Q969P5 355 aa22.53■■□□□ 1.2
TOP1MT-201ENST00000329245 MRPL17Q9NRX2 175 aaKnown RBP22.53■■□□□ 1.2
TOP1MT-201ENST00000329245 AFF4Q9UHB7 1163 aaKnown RBP22.53■■□□□ 1.2
TOP1MT-201ENST00000329245 FBXW11Q9UKB1 542 aa22.53■■□□□ 1.2
TOP1MT-201ENST00000329245 ZMYND8Q9ULU4 1186 aaPredicted RBP22.53■■□□□ 1.2
TOP1MT-201ENST00000329245 APOL1O14791 398 aa22.52■■□□□ 1.2
TOP1MT-201ENST00000329245 FGF18O76093 207 aa22.52■■□□□ 1.2
TOP1MT-201ENST00000329245 FAM153BP0C7A2 387 aa22.52■■□□□ 1.2
TOP1MT-201ENST00000329245 ADRA1BP35368 520 aa22.52■■□□□ 1.2
TOP1MT-201ENST00000329245 ARL4AP40617 200 aa22.52■■□□□ 1.2
TOP1MT-201ENST00000329245 AIF1P55008 147 aa22.52■■□□□ 1.2
TOP1MT-201ENST00000329245 FAM153CQ494X1 144 aa22.52■■□□□ 1.2
TOP1MT-201ENST00000329245 SYDE1Q6ZW31 735 aaPredicted RBP22.52■■□□□ 1.2
TOP1MT-201ENST00000329245 KRT222Q8N1A0 295 aa22.52■■□□□ 1.2
TOP1MT-201ENST00000329245 PCDH19Q8TAB3 1148 aa22.52■■□□□ 1.2
TOP1MT-201ENST00000329245 AUTS2Q8WXX7 1259 aa22.52■■□□□ 1.2
TOP1MT-201ENST00000329245 P3H4Q92791 437 aa22.52■■□□□ 1.2
TOP1MT-201ENST00000329245 HTATIP2Q9BUP3 242 aa22.52■■□□□ 1.2
TOP1MT-201ENST00000329245 FRMD8P1Q9BZ68 369 aaPredicted RBP22.52■■□□□ 1.2
TOP1MT-201ENST00000329245 IL37Q9NZH6 218 aa22.52■■□□□ 1.2
TOP1MT-201ENST00000329245 GMIPQ9P107 970 aa22.52■■□□□ 1.2
TOP1MT-201ENST00000329245 FAM153AQ9UHL3 310 aa22.52■■□□□ 1.2
TOP1MT-201ENST00000329245 NUDT5Q9UKK9 219 aa22.52■■□□□ 1.2
TOP1MT-201ENST00000329245 PATJQ8NI35 1801 aa22.52■■□□□ 1.2
TOP1MT-201ENST00000329245 ZNF487B1APH4 448 aa22.52■■□□□ 1.2
TOP1MT-201ENST00000329245 CA8P35219 290 aa22.52■■□□□ 1.2
TOP1MT-201ENST00000329245 VCPP55072 806 aaKnown RBP22.52■■□□□ 1.2
TOP1MT-201ENST00000329245 MTMR3Q13615 1198 aa22.52■■□□□ 1.2
TOP1MT-201ENST00000329245 TRIP13Q15645 432 aaPredicted RBP22.52■■□□□ 1.2
TOP1MT-201ENST00000329245 HERC6Q8IVU3 1022 aa22.52■■□□□ 1.2
TOP1MT-201ENST00000329245 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.52■■□□□ 1.29e-10■■■■■ 79.8
TOP1MT-201ENST00000329245 HERVK_113Q902F9 699 aa22.52■■□□□ 1.2
TOP1MT-201ENST00000329245 RAD9AQ99638 391 aa22.52■■□□□ 1.2
TOP1MT-201ENST00000329245 CWC15Q9P013 229 aaKnown RBP22.52■■□□□ 1.2
TOP1MT-201ENST00000329245 ASIC3Q9UHC3 531 aa22.52■■□□□ 1.2
TOP1MT-201ENST00000329245 SFMBT1Q9UHJ3 866 aa22.52■■□□□ 1.2
TOP1MT-201ENST00000329245 DRG1Q9Y295 367 aaKnown RBP22.52■■□□□ 1.2
TOP1MT-201ENST00000329245 ALPK3Q96L96 1907 aa22.52■■□□□ 1.2
TOP1MT-201ENST00000329245 PECAM1P16284 738 aaPredicted RBP22.51■■□□□ 1.19
TOP1MT-201ENST00000329245 CXCR3P49682 368 aa22.51■■□□□ 1.19
TOP1MT-201ENST00000329245 DRG2P55039 364 aaKnown RBP22.51■■□□□ 1.19
TOP1MT-201ENST00000329245 NNTQ13423 1086 aa22.51■■□□□ 1.19
TOP1MT-201ENST00000329245 C1orf228Q6PIY5 440 aa22.51■■□□□ 1.19
TOP1MT-201ENST00000329245 PQLC3Q8N755 202 aa22.51■■□□□ 1.19
TOP1MT-201ENST00000329245 NKD2Q969F2 451 aaPredicted RBP22.51■■□□□ 1.19
TOP1MT-201ENST00000329245 NTAN1Q96AB6 310 aa22.51■■□□□ 1.19
TOP1MT-201ENST00000329245 FAF2Q96CS3 445 aa22.51■■□□□ 1.19
TOP1MT-201ENST00000329245 CSPG4P5Q96PW8 444 aa22.51■■□□□ 1.19
TOP1MT-201ENST00000329245 LBHD1Q9BQE6 289 aaPredicted RBP22.51■■□□□ 1.19
TOP1MT-201ENST00000329245 TKTL2Q9H0I9 626 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms