RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 SFMBT1Q9UHJ3 866 aa16.56■□□□□ 0.24
SYNM-201ENST00000328642 C10orf71Q711Q0 1435 aa16.56■□□□□ 0.24
SYNM-201ENST00000328642 ARHGEF37A1IGU5 675 aa16.56■□□□□ 0.24
SYNM-201ENST00000328642 SNAI1O95863 264 aaPredicted RBP16.56■□□□□ 0.24
SYNM-201ENST00000328642 IQCF3P0C7M6 154 aa16.56■□□□□ 0.24
SYNM-201ENST00000328642 CLCNKBP51801 687 aa16.56■□□□□ 0.24
SYNM-201ENST00000328642 RPL10AP62906 217 aaKnown RBP16.56■□□□□ 0.24
SYNM-201ENST00000328642 DDR2Q16832 855 aa16.56■□□□□ 0.24
SYNM-201ENST00000328642 TAF1BQ53T94 588 aaPredicted RBP16.56■□□□□ 0.24
SYNM-201ENST00000328642 HSP90AA5PQ58FG0 334 aa16.56■□□□□ 0.24
SYNM-201ENST00000328642 TAF2Q6P1X5 1199 aa16.56■□□□□ 0.24
SYNM-201ENST00000328642 B3GNT9Q6UX72 402 aa16.56■□□□□ 0.24
SYNM-201ENST00000328642 FAM161BQ96MY7 647 aa16.56■□□□□ 0.24
SYNM-201ENST00000328642 RNF157Q96PX1 679 aa16.56■□□□□ 0.24
SYNM-201ENST00000328642 RAB3IPQ96QF0 476 aaPredicted RBP16.56■□□□□ 0.24
SYNM-201ENST00000328642 MAGEB5Q9BZ81 275 aa16.56■□□□□ 0.24
SYNM-201ENST00000328642 TASP1Q9H6P5 420 aa16.56■□□□□ 0.24
SYNM-201ENST00000328642 ACTR5Q9H9F9 607 aaPredicted RBP16.56■□□□□ 0.24
SYNM-201ENST00000328642 FAM105AQ9NUU6 356 aa16.56■□□□□ 0.24
SYNM-201ENST00000328642 VANGL2Q9ULK5 521 aa16.56■□□□□ 0.24
SYNM-201ENST00000328642 KCNH4Q9UQ05 1017 aa16.56■□□□□ 0.24
SYNM-201ENST00000328642 CLGNO14967 610 aa16.56■□□□□ 0.24
SYNM-201ENST00000328642 ASPAP45381 313 aa16.56■□□□□ 0.24
SYNM-201ENST00000328642 LRRC36Q1X8D7 754 aa16.56■□□□□ 0.24
SYNM-201ENST00000328642 PTPRN2Q92932 1015 aa16.56■□□□□ 0.24
SYNM-201ENST00000328642 FBXO32Q969P5 355 aa16.56■□□□□ 0.24
SYNM-201ENST00000328642 FAM167BQ9BTA0 163 aa16.56■□□□□ 0.24
SYNM-201ENST00000328642 SIX4Q9UIU6 781 aa16.56■□□□□ 0.24
SYNM-201ENST00000328642 MYBPHLA2RUH7 354 aa16.55■□□□□ 0.24
SYNM-201ENST00000328642 PRRG1O14668 218 aa16.55■□□□□ 0.24
SYNM-201ENST00000328642 CYP1A1P04798 512 aaPredicted RBP16.55■□□□□ 0.24
SYNM-201ENST00000328642 CSE1LP55060 971 aaKnown RBP16.55■□□□□ 0.24
SYNM-201ENST00000328642 ART4Q93070 314 aa16.55■□□□□ 0.24
SYNM-201ENST00000328642 KLC4Q9NSK0 619 aa16.55■□□□□ 0.24
SYNM-201ENST00000328642 TXLNGQ9NUQ3 528 aa16.55■□□□□ 0.24
SYNM-201ENST00000328642 SLC12A8A0AV02 714 aa16.55■□□□□ 0.24
SYNM-201ENST00000328642 MDM4O15151 490 aa16.55■□□□□ 0.24
SYNM-201ENST00000328642 MSI1O43347 362 aaKnown RBP16.55■□□□□ 0.24
SYNM-201ENST00000328642 DGKIO75912 1065 aa16.55■□□□□ 0.24
SYNM-201ENST00000328642 ASGR1P07306 291 aa16.55■□□□□ 0.24
SYNM-201ENST00000328642 ERVK-10P10266 1014 aa16.55■□□□□ 0.24
SYNM-201ENST00000328642 CORO7P57737 925 aa16.55■□□□□ 0.24
SYNM-201ENST00000328642 PDK2Q15119 407 aa16.55■□□□□ 0.24
SYNM-201ENST00000328642 ANKRD20A8PQ5CZ79 823 aa16.55■□□□□ 0.24
SYNM-201ENST00000328642 UBAP2Q5T6F2 1119 aaKnown RBP16.55■□□□□ 0.24
SYNM-201ENST00000328642 BLOC1S5Q8TDH9 187 aa16.55■□□□□ 0.24
SYNM-201ENST00000328642 SGSM3Q96HU1 749 aa16.55■□□□□ 0.24
SYNM-201ENST00000328642 HERPUD2Q9BSE4 406 aa16.55■□□□□ 0.24
SYNM-201ENST00000328642 MANSC1Q9H8J5 431 aa16.55■□□□□ 0.24
SYNM-201ENST00000328642 GRHL1Q9NZI5 618 aa16.55■□□□□ 0.24
SYNM-201ENST00000328642 IGF2BP3O00425 579 aaKnown RBP eCLIP16.55■□□□□ 0.24
SYNM-201ENST00000328642 TRDMT1O14717 391 aaKnown RBP16.55■□□□□ 0.24
SYNM-201ENST00000328642 PSMB4P28070 264 aa16.55■□□□□ 0.24
SYNM-201ENST00000328642 GJA5P36382 358 aa16.55■□□□□ 0.24
SYNM-201ENST00000328642 GRM5P41594 1212 aa16.55■□□□□ 0.24
SYNM-201ENST00000328642 ITPRIPL1Q6GPH6 555 aa16.55■□□□□ 0.24
SYNM-201ENST00000328642 TRIM67Q6ZTA4 783 aa16.55■□□□□ 0.24
SYNM-201ENST00000328642 RAB3IL1Q8TBN0 382 aa16.55■□□□□ 0.24
SYNM-201ENST00000328642 HTR3CQ8WXA8 447 aa16.55■□□□□ 0.24
SYNM-201ENST00000328642 TRIM56Q9BRZ2 755 aaKnown RBP16.55■□□□□ 0.24
SYNM-201ENST00000328642 TRMT13Q9NUP7 481 aaKnown RBP16.55■□□□□ 0.24
SYNM-201ENST00000328642 APOBEC2Q9Y235 224 aaKnown RBP16.55■□□□□ 0.24
SYNM-201ENST00000328642 C2CD2Q9Y426 696 aa16.55■□□□□ 0.24
SYNM-201ENST00000328642 PCDHB7Q9Y5E2 793 aa16.55■□□□□ 0.24
SYNM-201ENST00000328642 TUBGCP6Q96RT7 1819 aa16.55■□□□□ 0.24
SYNM-201ENST00000328642 ABCA3Q99758 1704 aa16.55■□□□□ 0.24
SYNM-201ENST00000328642 KCNA4P22459 653 aa16.54■□□□□ 0.24
SYNM-201ENST00000328642 SP100P23497 879 aaPredicted RBP16.54■□□□□ 0.24
SYNM-201ENST00000328642 PTGIRP43119 386 aa16.54■□□□□ 0.24
SYNM-201ENST00000328642 STX3Q13277 289 aa16.54■□□□□ 0.24
SYNM-201ENST00000328642 ARHGAP24Q8N264 748 aa16.54■□□□□ 0.24
SYNM-201ENST00000328642 B3GALT6Q96L58 329 aa16.54■□□□□ 0.24
SYNM-201ENST00000328642 CYP4F12Q9HCS2 524 aa16.54■□□□□ 0.24
SYNM-201ENST00000328642 CHST12Q9NRB3 414 aa16.54■□□□□ 0.24
SYNM-201ENST00000328642 IARS2Q9NSE4 1012 aaKnown RBP16.54■□□□□ 0.24
SYNM-201ENST00000328642 TRIM17Q9Y577 477 aa16.54■□□□□ 0.24
SYNM-201ENST00000328642 MEIS3P2A8K0S8 358 aa16.54■□□□□ 0.24
SYNM-201ENST00000328642 LTFP02788 710 aa16.54■□□□□ 0.24
SYNM-201ENST00000328642 POLBP06746 335 aa16.54■□□□□ 0.24
SYNM-201ENST00000328642 MX2P20592 715 aa16.54■□□□□ 0.24
SYNM-201ENST00000328642 ALLCQ8N6M5 410 aa16.54■□□□□ 0.24
SYNM-201ENST00000328642 DDX1Q92499 740 aaKnown RBP16.54■□□□□ 0.24
SYNM-201ENST00000328642 TMEM237Q96Q45 408 aa16.54■□□□□ 0.24
SYNM-201ENST00000328642 CD248Q9HCU0 757 aa16.54■□□□□ 0.24
SYNM-201ENST00000328642 NT5MQ9NPB1 228 aa16.54■□□□□ 0.24
SYNM-201ENST00000328642 HEY2Q9UBP5 337 aa16.54■□□□□ 0.24
SYNM-201ENST00000328642 SMG5Q9UPR3 1016 aaKnown RBP16.54■□□□□ 0.24
SYNM-201ENST00000328642 TRPV2Q9Y5S1 764 aa16.54■□□□□ 0.24
SYNM-201ENST00000328642 LRP5O75197 1615 aa16.54■□□□□ 0.24
SYNM-201ENST00000328642 TYW5A2RUC4 315 aaKnown RBP16.54■□□□□ 0.24
SYNM-201ENST00000328642 NPR3P17342 541 aa16.54■□□□□ 0.24
SYNM-201ENST00000328642 CDKN2BP42772 138 aa16.54■□□□□ 0.24
SYNM-201ENST00000328642 TWF1Q12792 350 aa16.54■□□□□ 0.24
SYNM-201ENST00000328642 CRHR2Q13324 411 aa16.54■□□□□ 0.24
SYNM-201ENST00000328642 VPS39Q96JC1 886 aa16.54■□□□□ 0.24
SYNM-201ENST00000328642 LRRC4CQ9HCJ2 640 aa16.54■□□□□ 0.24
SYNM-201ENST00000328642 RBM22Q9NW64 420 aaKnown RBP eCLIP16.54■□□□□ 0.24
SYNM-201ENST00000328642 PADI3Q9ULW8 664 aa16.54■□□□□ 0.24
SYNM-201ENST00000328642 PAPSS1O43252 624 aaPredicted RBP16.53■□□□□ 0.24
SYNM-201ENST00000328642 DCTN3O75935 186 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 364 ms