RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 USP18Q9UMW8 372 aa18.49■□□□□ 0.55
PRKCB-202ENST00000321728 STYXL1Q9Y6J8 313 aa18.49■□□□□ 0.55
PRKCB-202ENST00000321728 H3BNX3 289 aa18.48■□□□□ 0.55
PRKCB-202ENST00000321728 PEX1O43933 1283 aa18.48■□□□□ 0.55
PRKCB-202ENST00000321728 MAP3K6O95382 1288 aa18.48■□□□□ 0.55
PRKCB-202ENST00000321728 TEDDM1Q5T9Z0 273 aa18.48■□□□□ 0.55
PRKCB-202ENST00000321728 VWA5B1Q5TIE3 1220 aa18.48■□□□□ 0.55
PRKCB-202ENST00000321728 MBLAC2Q68D91 279 aa18.48■□□□□ 0.55
PRKCB-202ENST00000321728 PPP4R1Q8TF05 950 aa18.48■□□□□ 0.55
PRKCB-202ENST00000321728 DCUN1D1Q96GG9 259 aa18.48■□□□□ 0.55
PRKCB-202ENST00000321728 Q9H521 79 aa18.48■□□□□ 0.55
PRKCB-202ENST00000321728 USP29Q9HBJ7 922 aa18.48■□□□□ 0.55
PRKCB-202ENST00000321728 PDLIM7Q9NR12 457 aa18.48■□□□□ 0.55
PRKCB-202ENST00000321728 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.48■□□□□ 0.55
PRKCB-202ENST00000321728 PNPOQ9NVS9 261 aa18.48■□□□□ 0.55
PRKCB-202ENST00000321728 TMOD2Q9NZR1 351 aa18.48■□□□□ 0.55
PRKCB-202ENST00000321728 SH3BP1Q9Y3L3 701 aa18.48■□□□□ 0.55
PRKCB-202ENST00000321728 CNTNAP2Q9UHC6 1331 aa18.48■□□□□ 0.55
PRKCB-202ENST00000321728 THSD7AQ9UPZ6 1657 aa18.48■□□□□ 0.55
PRKCB-202ENST00000321728 SLC15A5A6NIM6 579 aa18.48■□□□□ 0.55
PRKCB-202ENST00000321728 TTLL13PA6NNM8 815 aa18.48■□□□□ 0.55
PRKCB-202ENST00000321728 CASQ2O14958 399 aaPredicted RBP18.48■□□□□ 0.55
PRKCB-202ENST00000321728 L1CAMP32004 1257 aa18.48■□□□□ 0.55
PRKCB-202ENST00000321728 IDH3AP50213 366 aa18.48■□□□□ 0.55
PRKCB-202ENST00000321728 RPL26P61254 145 aaKnown RBP18.48■□□□□ 0.55
PRKCB-202ENST00000321728 HPCAP84074 193 aa18.48■□□□□ 0.55
PRKCB-202ENST00000321728 PRKCEQ02156 737 aa18.48■□□□□ 0.55
PRKCB-202ENST00000321728 BTKQ06187 659 aa18.48■□□□□ 0.55
PRKCB-202ENST00000321728 FRMD7Q6ZUT3 714 aa18.48■□□□□ 0.55
PRKCB-202ENST00000321728 DEPTORQ8TB45 409 aa18.48■□□□□ 0.55
PRKCB-202ENST00000321728 LRRN4Q8WUT4 740 aa18.48■□□□□ 0.55
PRKCB-202ENST00000321728 PDCD2LQ9BRP1 358 aa18.48■□□□□ 0.55
PRKCB-202ENST00000321728 MTMR12Q9C0I1 747 aa18.48■□□□□ 0.55
PRKCB-202ENST00000321728 KLC2Q9H0B6 622 aa18.48■□□□□ 0.55
PRKCB-202ENST00000321728 NRDE2Q9H7Z3 1164 aa18.48■□□□□ 0.55
PRKCB-202ENST00000321728 UBAP1Q9NZ09 502 aa18.48■□□□□ 0.55
PRKCB-202ENST00000321728 APPL1Q9UKG1 709 aa18.48■□□□□ 0.55
PRKCB-202ENST00000321728 HEY1Q9Y5J3 304 aa18.48■□□□□ 0.55
PRKCB-202ENST00000321728 RGPD3A6NKT7 1758 aaPredicted RBP18.47■□□□□ 0.55
PRKCB-202ENST00000321728 STBD1O95210 358 aa18.47■□□□□ 0.55
PRKCB-202ENST00000321728 TRUB2O95900 331 aaKnown RBP18.47■□□□□ 0.55
PRKCB-202ENST00000321728 IMPDH2P12268 514 aa18.47■□□□□ 0.55
PRKCB-202ENST00000321728 CDH5P33151 784 aaPredicted RBP18.47■□□□□ 0.55
PRKCB-202ENST00000321728 SNAPC2Q13487 334 aa18.47■□□□□ 0.55
PRKCB-202ENST00000321728 OGFRL1Q5TC84 451 aaPredicted RBP18.47■□□□□ 0.55
PRKCB-202ENST00000321728 RGPD4Q7Z3J3 1758 aa18.47■□□□□ 0.55
PRKCB-202ENST00000321728 KBTBD6Q86V97 674 aa18.47■□□□□ 0.55
PRKCB-202ENST00000321728 NCAPG2Q86XI2 1143 aa18.47■□□□□ 0.55
PRKCB-202ENST00000321728 MARVELD2Q8N4S9 558 aa18.47■□□□□ 0.55
PRKCB-202ENST00000321728 METTL25Q8N6Q8 603 aa18.47■□□□□ 0.55
PRKCB-202ENST00000321728 CNBD2Q96M20 576 aa18.47■□□□□ 0.55
PRKCB-202ENST00000321728 NIF3L1Q9GZT8 377 aa18.47■□□□□ 0.55
PRKCB-202ENST00000321728 STN1Q9H668 368 aaKnown RBP18.47■□□□□ 0.55
PRKCB-202ENST00000321728 CYTH4Q9UIA0 394 aa18.47■□□□□ 0.55
PRKCB-202ENST00000321728 PACSIN3Q9UKS6 424 aa18.47■□□□□ 0.55
PRKCB-202ENST00000321728 PCDHGB4Q9UN71 923 aa18.47■□□□□ 0.55
PRKCB-202ENST00000321728 PCDHGB5Q9Y5G0 923 aa18.47■□□□□ 0.55
PRKCB-202ENST00000321728 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.47■□□□□ 0.55
PRKCB-202ENST00000321728 CSDE1O75534 798 aaKnown RBP18.47■□□□□ 0.55
PRKCB-202ENST00000321728 ITGBL1O95965 494 aaPredicted RBP18.47■□□□□ 0.55
PRKCB-202ENST00000321728 YWHAEP62258 255 aaKnown RBP18.47■□□□□ 0.55
PRKCB-202ENST00000321728 N4BP2L1Q5TBK1 243 aaPredicted RBP18.47■□□□□ 0.55
PRKCB-202ENST00000321728 KLC3Q6P597 504 aa18.47■□□□□ 0.55
PRKCB-202ENST00000321728 MAVSQ7Z434 540 aa18.47■□□□□ 0.55
PRKCB-202ENST00000321728 FNIP1Q8TF40 1166 aa18.47■□□□□ 0.55
PRKCB-202ENST00000321728 TFB1MQ8WVM0 346 aaKnown RBP18.47■□□□□ 0.55
PRKCB-202ENST00000321728 FRMD8Q9BZ67 464 aaPredicted RBP18.47■□□□□ 0.55
PRKCB-202ENST00000321728 PCDHGC3Q9UN70 934 aa18.47■□□□□ 0.55
PRKCB-202ENST00000321728 STRNO43815 780 aa18.46■□□□□ 0.55
PRKCB-202ENST00000321728 FGF3P11487 239 aaPredicted RBP18.46■□□□□ 0.55
PRKCB-202ENST00000321728 HSP90AA5PQ58FG0 334 aa18.46■□□□□ 0.55
PRKCB-202ENST00000321728 PQLC1Q8N2U9 271 aa18.46■□□□□ 0.55
PRKCB-202ENST00000321728 PHTF2Q8N3S3 785 aa18.46■□□□□ 0.55
PRKCB-202ENST00000321728 GSDMBQ8TAX9 411 aa18.46■□□□□ 0.55
PRKCB-202ENST00000321728 MIPOL1Q8TD10 442 aa18.46■□□□□ 0.55
PRKCB-202ENST00000321728 ZNF70Q9UC06 446 aaPredicted RBP18.46■□□□□ 0.55
PRKCB-202ENST00000321728 DENRO43583 198 aaKnown RBP18.46■□□□□ 0.55
PRKCB-202ENST00000321728 DCXO43602 365 aa18.46■□□□□ 0.55
PRKCB-202ENST00000321728 DNAJA2O60884 412 aa18.46■□□□□ 0.55
PRKCB-202ENST00000321728 ZBED1O96006 694 aa18.46■□□□□ 0.55
PRKCB-202ENST00000321728 RBL1P28749 1068 aa18.46■□□□□ 0.55
PRKCB-202ENST00000321728 ABCD1P33897 745 aa18.46■□□□□ 0.55
PRKCB-202ENST00000321728 GABRB2P47870 512 aa18.46■□□□□ 0.55
PRKCB-202ENST00000321728 EMC2Q15006 297 aa18.46■□□□□ 0.55
PRKCB-202ENST00000321728 IYDQ6PHW0 289 aa18.46■□□□□ 0.55
PRKCB-202ENST00000321728 RDM1Q8NG50 284 aa18.46■□□□□ 0.55
PRKCB-202ENST00000321728 ZFP28Q8NHY6 868 aa18.46■□□□□ 0.55
PRKCB-202ENST00000321728 ABTB1Q969K4 478 aaPredicted RBP18.46■□□□□ 0.55
PRKCB-202ENST00000321728 CPXM1Q96SM3 734 aa18.46■□□□□ 0.55
PRKCB-202ENST00000321728 PXMP2Q9NR77 195 aa18.46■□□□□ 0.55
PRKCB-202ENST00000321728 ARHGAP26Q9UNA1 814 aa18.46■□□□□ 0.55
PRKCB-202ENST00000321728 SSX2IPQ9Y2D8 614 aa18.46■□□□□ 0.55
PRKCB-202ENST00000321728 ZSCAN9O15535 394 aaPredicted RBP18.46■□□□□ 0.54
PRKCB-202ENST00000321728 DKC1O60832 514 aaKnown RBP eCLIP18.46■□□□□ 0.54
PRKCB-202ENST00000321728 PSAPP07602 524 aa18.46■□□□□ 0.54
PRKCB-202ENST00000321728 SERPINB9P50453 376 aa18.46■□□□□ 0.54
PRKCB-202ENST00000321728 TRPC3Q13507 836 aa18.46■□□□□ 0.54
PRKCB-202ENST00000321728 TFDP2Q14188 446 aa18.46■□□□□ 0.54
PRKCB-202ENST00000321728 CCDC60Q8IWA6 550 aaPredicted RBP18.46■□□□□ 0.54
PRKCB-202ENST00000321728 MPP5Q8N3R9 675 aa18.46■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms