RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 LCP1P13796 627 aa13.29□□□□□ -0.28
CKS2-201ENST00000314355 CORO1AP31146 461 aaKnown RBP13.29□□□□□ -0.28
CKS2-201ENST00000314355 PGFP49763 221 aa13.29□□□□□ -0.28
CKS2-201ENST00000314355 ZNF445P59923 1031 aa13.29□□□□□ -0.28
CKS2-201ENST00000314355 MORC3Q14149 939 aa13.29□□□□□ -0.28
CKS2-201ENST00000314355 SF3A2Q15428 464 aaKnown RBP13.29□□□□□ -0.28
CKS2-201ENST00000314355 CNGA2Q16280 664 aa13.29□□□□□ -0.28
CKS2-201ENST00000314355 TPD52L1Q16890 204 aaPredicted RBP13.29□□□□□ -0.28
CKS2-201ENST00000314355 MPPE1Q53F39 396 aa13.29□□□□□ -0.28
CKS2-201ENST00000314355 SPDYCQ5MJ68 293 aa13.29□□□□□ -0.28
CKS2-201ENST00000314355 PMS2CLQ68D20 193 aa13.29□□□□□ -0.28
CKS2-201ENST00000314355 PM20D1Q6GTS8 502 aa13.29□□□□□ -0.28
CKS2-201ENST00000314355 DENND1CQ8IV53 801 aa13.29□□□□□ -0.28
CKS2-201ENST00000314355 CCDC117Q8IWD4 279 aaPredicted RBP13.29□□□□□ -0.28
CKS2-201ENST00000314355 EHBP1Q8NDI1 1231 aa13.29□□□□□ -0.28
CKS2-201ENST00000314355 UBA3Q8TBC4 463 aa13.29□□□□□ -0.28
CKS2-201ENST00000314355 KCTD13Q8WZ19 329 aa13.29□□□□□ -0.28
CKS2-201ENST00000314355 BHMTQ93088 406 aa13.29□□□□□ -0.28
CKS2-201ENST00000314355 SRRTQ9BXP5 876 aaKnown RBP13.29□□□□□ -0.28
CKS2-201ENST00000314355 NUSAP1Q9BXS6 441 aaKnown RBP13.29□□□□□ -0.28
CKS2-201ENST00000314355 ULBP1Q9BZM6 244 aa13.29□□□□□ -0.28
CKS2-201ENST00000314355 PLK2Q9NYY3 685 aa13.29□□□□□ -0.28
CKS2-201ENST00000314355 CTNND2Q9UQB3 1225 aa13.29□□□□□ -0.28
CKS2-201ENST00000314355 SPTBN4Q9H254 2564 aa13.29□□□□□ -0.28
CKS2-201ENST00000314355 CFAP54Q96N23 3096 aa13.28□□□□□ -0.28
CKS2-201ENST00000314355 SDK1Q7Z5N4 2213 aa13.28□□□□□ -0.28
CKS2-201ENST00000314355 GFRA2O00451 464 aa13.28□□□□□ -0.28
CKS2-201ENST00000314355 MED7O43513 233 aa13.28□□□□□ -0.28
CKS2-201ENST00000314355 TIMM44O43615 452 aa13.28□□□□□ -0.28
CKS2-201ENST00000314355 GDF9O60383 454 aa13.28□□□□□ -0.28
CKS2-201ENST00000314355 SYNCRIPO60506 623 aaKnown RBP13.28□□□□□ -0.28
CKS2-201ENST00000314355 NDUFS2O75306 463 aa13.28□□□□□ -0.28
CKS2-201ENST00000314355 AFPP02771 609 aaKnown RBP13.28□□□□□ -0.28
CKS2-201ENST00000314355 WASP42768 502 aa13.28□□□□□ -0.28
CKS2-201ENST00000314355 ZNF132P52740 706 aa13.28□□□□□ -0.28
CKS2-201ENST00000314355 ATXN3P54252 364 aaPredicted RBP13.28□□□□□ -0.28
CKS2-201ENST00000314355 STX17P56962 302 aa13.28□□□□□ -0.28
CKS2-201ENST00000314355 ADIGQ0VDE8 80 aa13.28□□□□□ -0.28
CKS2-201ENST00000314355 KCNH2Q12809 1159 aa13.28□□□□□ -0.28
CKS2-201ENST00000314355 PPM1JQ5JR12 505 aa13.28□□□□□ -0.28
CKS2-201ENST00000314355 PLA2G2CQ5R387 149 aa13.28□□□□□ -0.28
CKS2-201ENST00000314355 BSPRYQ5W0U4 402 aa13.28□□□□□ -0.28
CKS2-201ENST00000314355 LCLAT1Q6UWP7 414 aa13.28□□□□□ -0.28
CKS2-201ENST00000314355 RABEPKQ7Z6M1 372 aa13.28□□□□□ -0.28
CKS2-201ENST00000314355 UNC45BQ8IWX7 931 aa13.28□□□□□ -0.28
CKS2-201ENST00000314355 RLN3Q8WXF3 142 aa13.28□□□□□ -0.28
CKS2-201ENST00000314355 PIGKQ92643 395 aa13.28□□□□□ -0.28
CKS2-201ENST00000314355 WBP2Q969T9 261 aa13.28□□□□□ -0.28
CKS2-201ENST00000314355 HSFY1Q96LI6 401 aa13.28□□□□□ -0.28
CKS2-201ENST00000314355 SLC2A11Q9BYW1 496 aa13.28□□□□□ -0.28
CKS2-201ENST00000314355 HBS1LQ9Y450 684 aaKnown RBP13.28□□□□□ -0.28
CKS2-201ENST00000314355 MED19A0JLT2 244 aaPredicted RBP13.27□□□□□ -0.29
CKS2-201ENST00000314355 TYW5A2RUC4 315 aaKnown RBP13.27□□□□□ -0.29
CKS2-201ENST00000314355 PPP1R3GB7ZBB8 358 aa13.27□□□□□ -0.29
CKS2-201ENST00000314355 FBXO21O94952 628 aa13.27□□□□□ -0.29
CKS2-201ENST00000314355 P2RY2P41231 377 aa13.27□□□□□ -0.29
CKS2-201ENST00000314355 UBE2HP62256 183 aa13.27□□□□□ -0.29
CKS2-201ENST00000314355 GCNT1Q02742 428 aa13.27□□□□□ -0.29
CKS2-201ENST00000314355 RPL6Q02878 288 aaKnown RBP13.27□□□□□ -0.29
CKS2-201ENST00000314355 LMAN2Q12907 356 aa13.27□□□□□ -0.29
CKS2-201ENST00000314355 STPG1Q5TH74 334 aa13.27□□□□□ -0.29
CKS2-201ENST00000314355 Q6ZNB5 142 aa13.27□□□□□ -0.29
CKS2-201ENST00000314355 RRAGAQ7L523 313 aa13.27□□□□□ -0.29
CKS2-201ENST00000314355 FMNL3Q8IVF7 1028 aa13.27□□□□□ -0.29
CKS2-201ENST00000314355 PHTF2Q8N3S3 785 aa13.27□□□□□ -0.29
CKS2-201ENST00000314355 CPXM2Q8N436 756 aa13.27□□□□□ -0.29
CKS2-201ENST00000314355 ZNF557Q8N988 423 aaPredicted RBP13.27□□□□□ -0.29
CKS2-201ENST00000314355 IRGQQ8WZA9 623 aa13.27□□□□□ -0.29
CKS2-201ENST00000314355 TMA16Q96EY4 203 aaKnown RBP13.27□□□□□ -0.29
CKS2-201ENST00000314355 DDX50Q9BQ39 737 aaKnown RBP13.27□□□□□ -0.29
CKS2-201ENST00000314355 EDEM2Q9BV94 578 aa13.27□□□□□ -0.29
CKS2-201ENST00000314355 TRIM62Q9BVG3 475 aa13.27□□□□□ -0.29
CKS2-201ENST00000314355 ZDHHC4Q9NPG8 344 aa13.27□□□□□ -0.29
CKS2-201ENST00000314355 ST7Q9NRC1 585 aa13.27□□□□□ -0.29
CKS2-201ENST00000314355 AGO1Q9UL18 857 aaKnown RBP13.27□□□□□ -0.29
CKS2-201ENST00000314355 SLC27A6Q9Y2P4 619 aa13.27□□□□□ -0.29
CKS2-201ENST00000314355 VPS13AQ96RL7 3174 aa13.27□□□□□ -0.29
CKS2-201ENST00000314355 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.26□□□□□ -0.29
CKS2-201ENST00000314355 M0QYV0 167 aa13.26□□□□□ -0.29
CKS2-201ENST00000314355 O00370 1275 aa13.26□□□□□ -0.29
CKS2-201ENST00000314355 SART1O43290 800 aaKnown RBP13.26□□□□□ -0.29
CKS2-201ENST00000314355 GREM1O60565 184 aa13.26□□□□□ -0.29
CKS2-201ENST00000314355 ADAM23O75077 832 aa13.26□□□□□ -0.29
CKS2-201ENST00000314355 ACADMP11310 421 aa13.26□□□□□ -0.29
CKS2-201ENST00000314355 KRT5P13647 590 aa13.26□□□□□ -0.29
CKS2-201ENST00000314355 HNRNPLP14866 589 aaKnown RBP eCLIP13.26□□□□□ -0.29
CKS2-201ENST00000314355 CD44P16070 742 aaKnown RBP13.26□□□□□ -0.29
CKS2-201ENST00000314355 ACADSBP45954 432 aa13.26□□□□□ -0.29
CKS2-201ENST00000314355 SLC11A2P49281 568 aa13.26□□□□□ -0.29
CKS2-201ENST00000314355 MFAP3P55082 362 aa13.26□□□□□ -0.29
CKS2-201ENST00000314355 MESP2Q0VG99 397 aa13.26□□□□□ -0.29
CKS2-201ENST00000314355 LYSMD4Q5XG99 296 aa13.26□□□□□ -0.29
CKS2-201ENST00000314355 EGFLAMQ63HQ2 1017 aa13.26□□□□□ -0.29
CKS2-201ENST00000314355 TTI2Q6NXR4 508 aa13.26□□□□□ -0.29
CKS2-201ENST00000314355 ENOSF1Q7L5Y1 443 aa13.26□□□□□ -0.29
CKS2-201ENST00000314355 ANKS1BQ7Z6G8 1248 aa13.26□□□□□ -0.29
CKS2-201ENST00000314355 SYT12Q8IV01 421 aa13.26□□□□□ -0.29
CKS2-201ENST00000314355 SFTPA1Q8IWL2 248 aa13.26□□□□□ -0.29
CKS2-201ENST00000314355 TMEFF1Q8IYR6 380 aa13.26□□□□□ -0.29
CKS2-201ENST00000314355 SCML4Q8N228 414 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms