RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 ZNF670Q9BS34 389 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 S100A14Q9HCY8 104 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 DMAP1Q9NPF5 467 aaPredicted RBP14.32□□□□□ -0.12
MKS1-201ENST00000313863 MAD1L1Q9Y6D9 718 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 TTLL13PA6NNM8 815 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 CCNT2O60583 730 aaKnown RBP14.32□□□□□ -0.12
MKS1-201ENST00000313863 GCATO75600 419 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 UBTFL6P0CB48 400 aaPredicted RBP14.32□□□□□ -0.12
MKS1-201ENST00000313863 SRGAP2CP0DJJ0 459 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 CSH1P0DML2 217 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 CSH2P0DML3 217 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 GRK2P25098 689 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 COPAP53621 1224 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 NRLP54845 237 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 ASPHQ12797 758 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 CDC16Q13042 620 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 BMPR2Q13873 1038 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 FASTKD1Q53R41 847 aaKnown RBP14.32□□□□□ -0.12
MKS1-201ENST00000313863 MAP3K21Q5TCX8 1036 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 OR6B2Q6IFH4 312 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 RFX8Q6ZV50 586 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 RNF149Q8NC42 400 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 FAM172AQ8WUF8 416 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 SEPT1Q8WYJ6 367 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 CDKL2Q92772 493 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 DTNBP1Q96EV8 351 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 PIDD1Q9HB75 910 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 HOXC10Q9NYD6 342 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 MARCOQ9UEW3 520 aaPredicted RBP14.32□□□□□ -0.12
MKS1-201ENST00000313863 DCDC2Q9UHG0 476 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 HEY1Q9Y5J3 304 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 DCAF8L1A6NGE4 600 aa14.31□□□□□ -0.12
MKS1-201ENST00000313863 ARHGAP42A6NI28 874 aa14.31□□□□□ -0.12
MKS1-201ENST00000313863 FARP2O94887 1054 aaPredicted RBP14.31□□□□□ -0.12
MKS1-201ENST00000313863 RTN3O95197 1032 aaPredicted RBP14.31□□□□□ -0.12
MKS1-201ENST00000313863 UBA1P22314 1058 aaKnown RBP14.31□□□□□ -0.12
MKS1-201ENST00000313863 CDK7P50613 346 aa14.31□□□□□ -0.12
MKS1-201ENST00000313863 CUL3Q13618 768 aa14.31□□□□□ -0.12
MKS1-201ENST00000313863 MDH1BQ5I0G3 518 aa14.31□□□□□ -0.12
MKS1-201ENST00000313863 SYCP2LQ5T4T6 812 aa14.31□□□□□ -0.12
MKS1-201ENST00000313863 MROH9Q5TGP6 573 aa14.31□□□□□ -0.12
MKS1-201ENST00000313863 RASIP1Q5U651 963 aa14.31□□□□□ -0.12
MKS1-201ENST00000313863 CYP4V2Q6ZWL3 525 aaPredicted RBP14.31□□□□□ -0.12
MKS1-201ENST00000313863 SDCCAG8Q86SQ7 713 aaPredicted RBP14.31□□□□□ -0.12
MKS1-201ENST00000313863 DHDDSQ86SQ9 333 aa14.31□□□□□ -0.12
MKS1-201ENST00000313863 CCNJLQ8IV13 435 aa14.31□□□□□ -0.12
MKS1-201ENST00000313863 FBXO27Q8NI29 283 aa14.31□□□□□ -0.12
MKS1-201ENST00000313863 CMTM5Q96DZ9 223 aa14.31□□□□□ -0.12
MKS1-201ENST00000313863 SIGLEC10Q96LC7 697 aa14.31□□□□□ -0.12
MKS1-201ENST00000313863 HEXIM2Q96MH2 286 aaKnown RBP14.31□□□□□ -0.12
MKS1-201ENST00000313863 PCYT2Q99447 389 aa14.31□□□□□ -0.12
MKS1-201ENST00000313863 ELOVL4Q9GZR5 314 aa14.31□□□□□ -0.12
MKS1-201ENST00000313863 VRTNQ9H8Y1 702 aa14.31□□□□□ -0.12
MKS1-201ENST00000313863 PCDH18Q9HCL0 1135 aa14.31□□□□□ -0.12
MKS1-201ENST00000313863 SMYD2Q9NRG4 433 aa14.31□□□□□ -0.12
MKS1-201ENST00000313863 DNAJC28Q9NX36 388 aa14.31□□□□□ -0.12
MKS1-201ENST00000313863 A0A088AWK7 358 aa14.3□□□□□ -0.12
MKS1-201ENST00000313863 MDM4O15151 490 aa14.3□□□□□ -0.12
MKS1-201ENST00000313863 CPOXP36551 454 aa14.3□□□□□ -0.12
MKS1-201ENST00000313863 NR2C2P49116 596 aa14.3□□□□□ -0.12
MKS1-201ENST00000313863 PDCD2Q16342 344 aaPredicted RBP14.3□□□□□ -0.12
MKS1-201ENST00000313863 SLC5A9Q2M3M2 681 aa14.3□□□□□ -0.12
MKS1-201ENST00000313863 MARK2Q7KZI7 788 aaKnown RBP14.3□□□□□ -0.12
MKS1-201ENST00000313863 RASSF3Q86WH2 238 aa14.3□□□□□ -0.12
MKS1-201ENST00000313863 NME8Q8N427 588 aa14.3□□□□□ -0.12
MKS1-201ENST00000313863 CCDC33Q8N5R6 958 aa14.3□□□□□ -0.12
MKS1-201ENST00000313863 OR6Y1Q8NGX8 325 aa14.3□□□□□ -0.12
MKS1-201ENST00000313863 AFG1LQ8WV93 481 aa14.3□□□□□ -0.12
MKS1-201ENST00000313863 LBHD1Q9BQE6 289 aaPredicted RBP14.3□□□□□ -0.12
MKS1-201ENST00000313863 KLHL4Q9C0H6 718 aa14.3□□□□□ -0.12
MKS1-201ENST00000313863 PTPRHQ9HD43 1115 aa14.3□□□□□ -0.12
MKS1-201ENST00000313863 CYB561D2O14569 222 aa14.3□□□□□ -0.12
MKS1-201ENST00000313863 SERPINE1P05121 402 aa14.3□□□□□ -0.12
MKS1-201ENST00000313863 TGFB3P10600 412 aa14.3□□□□□ -0.12
MKS1-201ENST00000313863 MLNP12872 115 aa14.3□□□□□ -0.12
MKS1-201ENST00000313863 PRDX6P30041 224 aa14.3□□□□□ -0.12
MKS1-201ENST00000313863 SLC1A6P48664 564 aa14.3□□□□□ -0.12
MKS1-201ENST00000313863 CDH8P55286 799 aa14.3□□□□□ -0.12
MKS1-201ENST00000313863 TNFAIP2Q03169 654 aa14.3□□□□□ -0.12
MKS1-201ENST00000313863 CXCL9Q07325 125 aa14.3□□□□□ -0.12
MKS1-201ENST00000313863 MED21Q13503 144 aa14.3□□□□□ -0.12
MKS1-201ENST00000313863 INSCQ1MX18 579 aa14.3□□□□□ -0.12
MKS1-201ENST00000313863 FOXB2Q5VYV0 432 aa14.3□□□□□ -0.12
MKS1-201ENST00000313863 LCLAT1Q6UWP7 414 aa14.3□□□□□ -0.12
MKS1-201ENST00000313863 CATSPERGQ6ZRH7 1159 aa14.3□□□□□ -0.12
MKS1-201ENST00000313863 PDSS2Q86YH6 399 aa14.3□□□□□ -0.12
MKS1-201ENST00000313863 PQLC3Q8N755 202 aa14.3□□□□□ -0.12
MKS1-201ENST00000313863 CLPTM1LQ96KA5 538 aa14.3□□□□□ -0.12
MKS1-201ENST00000313863 SMYD3Q9H7B4 428 aa14.3□□□□□ -0.12
MKS1-201ENST00000313863 NRDE2Q9H7Z3 1164 aa14.3□□□□□ -0.12
MKS1-201ENST00000313863 NDUFA13Q9P0J0 144 aa14.3□□□□□ -0.12
MKS1-201ENST00000313863 SIX4Q9UIU6 781 aa14.3□□□□□ -0.12
MKS1-201ENST00000313863 TNFSF13BQ9Y275 285 aa14.3□□□□□ -0.12
MKS1-201ENST00000313863 MAP3K13O43283 966 aa14.29□□□□□ -0.12
MKS1-201ENST00000313863 BUD23O43709 281 aaKnown RBP14.29□□□□□ -0.12
MKS1-201ENST00000313863 PIM1P11309 404 aaPredicted RBP14.29□□□□□ -0.12
MKS1-201ENST00000313863 SDC4P31431 198 aa14.29□□□□□ -0.12
MKS1-201ENST00000313863 L1CAMP32004 1257 aa14.29□□□□□ -0.12
MKS1-201ENST00000313863 TCF7P36402 384 aaPredicted RBP14.29□□□□□ -0.12
MKS1-201ENST00000313863 HIRAP54198 1017 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms