RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 MCEEQ96PE7 176 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 FAM192AQ9GZU8 254 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 FAM217BQ9NTX9 383 aaPredicted RBP8.43□□□□□ -1.06
VPS41-202ENST00000310301 THG1LQ9NWX6 298 aaKnown RBP8.43□□□□□ -1.06
VPS41-202ENST00000310301 DOT1LQ8TEK3 1739 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 PDXKO00764 312 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 ATMINO43313 823 aaPredicted RBP8.43□□□□□ -1.06
VPS41-202ENST00000310301 PSTPIP1O43586 416 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 TRIM13O60858 407 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 MOCS2O96007 188 aaPredicted RBP8.43□□□□□ -1.06
VPS41-202ENST00000310301 KLRC2P26717 231 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 KBTBD12Q3ZCT8 623 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 ATF7IP2Q5U623 682 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 CCDC80Q76M96 950 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 PPIL6Q8IXY8 311 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 JADE3Q92613 823 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 PRCCQ92733 491 aaPredicted RBP8.43□□□□□ -1.06
VPS41-202ENST00000310301 ARHGEF3Q9NR81 526 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 KLHL20Q9Y2M5 609 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 PCDHAC2Q9Y5I4 1007 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 INSRRP14616 1297 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 DDX5P17844 614 aaKnown RBP8.43□□□□□ -1.06
VPS41-202ENST00000310301 CELF3Q5SZQ8 465 aaKnown RBP8.43□□□□□ -1.06
VPS41-202ENST00000310301 TTC23LQ6PF05 361 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 ZNF467Q7Z7K2 595 aaPredicted RBP8.43□□□□□ -1.06
VPS41-202ENST00000310301 ANKLE1Q8NAG6 615 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 ASAP3Q8TDY4 903 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 ILKAPQ9H0C8 392 aaPredicted RBP8.43□□□□□ -1.06
VPS41-202ENST00000310301 AGO2Q9UKV8 859 aaKnown RBP8.43□□□□□ -1.06
VPS41-202ENST00000310301 ALG6Q9Y672 507 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 TSPAN9O75954 239 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 TMEM253P0C7T8 217 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 ZNF286BP0CG31 522 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 PAX3P23760 479 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 NUP62P37198 522 aaPredicted RBP8.43□□□□□ -1.06
VPS41-202ENST00000310301 AQP5P55064 265 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 RTP1P59025 263 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 TRMT5Q32P41 509 aaKnown RBP8.43□□□□□ -1.06
VPS41-202ENST00000310301 PRAMEF19Q5SWL8 479 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 IRGCQ6NXR0 463 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 LRRC6Q86X45 466 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 PGBD3Q8N328 593 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 UBASH3BQ8TF42 649 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 RSPH1Q8WYR4 309 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 TMEM143Q96AN5 459 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 ASIC4Q96FT7 647 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 TRIM9Q9C026 710 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 CEP44Q9C0F1 390 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 C6orf62Q9GZU0 229 aaPredicted RBP8.43□□□□□ -1.06
VPS41-202ENST00000310301 CLEC4MQ9H2X3 399 aaPredicted RBP8.43□□□□□ -1.06
VPS41-202ENST00000310301 RBAKQ9NYW8 714 aaPredicted RBP8.43□□□□□ -1.06
VPS41-202ENST00000310301 CD274Q9NZQ7 290 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 PAK5Q9P286 719 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 Q9Y3F1 56 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 TRPM3Q9HCF6 1732 aaPredicted RBP8.43□□□□□ -1.06
VPS41-202ENST00000310301 ZC3H11AO75152 810 aaKnown RBP eCLIP8.42□□□□□ -1.06
VPS41-202ENST00000310301 TNFAIP8O95379 198 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 LGALS2P05162 132 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 POLBP06746 335 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 ODC1P11926 461 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 GUCY1A2P33402 732 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 NDUFV1P49821 464 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 NDUFA5Q16718 116 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 LY6KQ17RY6 165 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 LMBRD2Q68DH5 695 aaPredicted RBP8.42□□□□□ -1.06
VPS41-202ENST00000310301 KLHL17Q6TDP4 642 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 CROCCP3Q8IVE0 287 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 ANKZF1Q9H8Y5 726 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 PSMD3O43242 534 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 HSMCR30P0CW71 290 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 NMT1P30419 496 aaKnown RBP8.42□□□□□ -1.06
VPS41-202ENST00000310301 TM4SF4P48230 202 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 HIRAP54198 1017 aaPredicted RBP8.42□□□□□ -1.06
VPS41-202ENST00000310301 RPL10AP62906 217 aaKnown RBP8.42□□□□□ -1.06
VPS41-202ENST00000310301 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.42□□□□□ -1.06
VPS41-202ENST00000310301 TMEM132DQ14C87 1099 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 GRIK5Q16478 980 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 ARMC3Q5W041 872 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 DAGLBQ8NCG7 672 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 UCMAQ8WVF2 138 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 MRPS31Q92665 395 aaKnown RBP8.42□□□□□ -1.06
VPS41-202ENST00000310301 THUMPD3Q9BV44 507 aaKnown RBP8.42□□□□□ -1.06
VPS41-202ENST00000310301 RIC8BQ9NVN3 520 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 SELENONQ9NZV5 590 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 RABGEF1Q9UJ41 708 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 EVPLLA8MZ36 301 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 PHGDHO43175 533 aaKnown RBP8.42□□□□□ -1.06
VPS41-202ENST00000310301 ALOX12P18054 663 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 PSMB9P28065 219 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 GSTT1P30711 240 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 SULT1E1P49888 294 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 TPI1P60174 286 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 ST8SIA6P61647 398 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 SNRPFP62306 86 aaKnown RBP8.42□□□□□ -1.06
VPS41-202ENST00000310301 DCTN2Q13561 401 aaKnown RBP8.42□□□□□ -1.06
VPS41-202ENST00000310301 ZNF280DQ6N043 979 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 SLC30A10Q6XR72 485 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 LRRC8DQ7L1W4 858 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 C18orf8Q96DM3 657 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 RMND5BQ96G75 393 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms