RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 FZD10Q9ULW2 581 aa12.36□□□□□ -0.43
TRIM40-205ENST00000307859 USP3Q9Y6I4 520 aa12.36□□□□□ -0.43
TRIM40-205ENST00000307859 NCOR1O75376 2440 aa12.36□□□□□ -0.43
TRIM40-205ENST00000307859 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.35□□□□□ -0.43
TRIM40-205ENST00000307859 SGK1O00141 431 aa12.35□□□□□ -0.43
TRIM40-205ENST00000307859 NDC80O14777 642 aa12.35□□□□□ -0.43
TRIM40-205ENST00000307859 APOL1O14791 398 aa12.35□□□□□ -0.43
TRIM40-205ENST00000307859 LTFP02788 710 aa12.35□□□□□ -0.43
TRIM40-205ENST00000307859 USP17L7P0C7H9 530 aa12.35□□□□□ -0.43
TRIM40-205ENST00000307859 ZSCAN5DPP0CG00 497 aa12.35□□□□□ -0.43
TRIM40-205ENST00000307859 CDR1P51861 262 aa12.35□□□□□ -0.43
TRIM40-205ENST00000307859 EIF3EP60228 445 aaKnown RBP12.35□□□□□ -0.43
TRIM40-205ENST00000307859 ZNF844Q08AG5 666 aa12.35□□□□□ -0.43
TRIM40-205ENST00000307859 P3H1Q32P28 736 aa12.35□□□□□ -0.43
TRIM40-205ENST00000307859 TTMPQ5BVD1 217 aa12.35□□□□□ -0.43
TRIM40-205ENST00000307859 PRUNE1Q86TP1 453 aa12.35□□□□□ -0.43
TRIM40-205ENST00000307859 NPAS4Q8IUM7 802 aa12.35□□□□□ -0.43
TRIM40-205ENST00000307859 GOLGA6L1Q8N7Z2 621 aa12.35□□□□□ -0.43
TRIM40-205ENST00000307859 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.35□□□□□ -0.43
TRIM40-205ENST00000307859 P3H4Q92791 437 aa12.35□□□□□ -0.43
TRIM40-205ENST00000307859 ARL8AQ96BM9 186 aa12.35□□□□□ -0.43
TRIM40-205ENST00000307859 KCTD15Q96SI1 283 aaPredicted RBP12.35□□□□□ -0.43
TRIM40-205ENST00000307859 SLC9A7Q96T83 725 aa12.35□□□□□ -0.43
TRIM40-205ENST00000307859 FOXP3Q9BZS1 431 aa12.35□□□□□ -0.43
TRIM40-205ENST00000307859 DHX35Q9H5Z1 703 aaKnown RBP12.35□□□□□ -0.43
TRIM40-205ENST00000307859 MARCH5Q9NX47 278 aa12.35□□□□□ -0.43
TRIM40-205ENST00000307859 LRFN2Q9ULH4 789 aa12.35□□□□□ -0.43
TRIM40-205ENST00000307859 NAALADL1Q9UQQ1 740 aa12.35□□□□□ -0.43
TRIM40-205ENST00000307859 PRG3Q9Y2Y8 225 aaPredicted RBP12.35□□□□□ -0.43
TRIM40-205ENST00000307859 PIEZO1Q92508 2521 aa12.35□□□□□ -0.43
TRIM40-205ENST00000307859 KIAA1671Q9BY89 1806 aa12.34□□□□□ -0.43
TRIM40-205ENST00000307859 DCDC2CA8MYV0 355 aa12.34□□□□□ -0.43
TRIM40-205ENST00000307859 M0QYT0 321 aa12.34□□□□□ -0.43
TRIM40-205ENST00000307859 RBP3P10745 1247 aa12.34□□□□□ -0.43
TRIM40-205ENST00000307859 ETS1P14921 441 aa12.34□□□□□ -0.43
TRIM40-205ENST00000307859 CYP2F1P24903 491 aa12.34□□□□□ -0.43
TRIM40-205ENST00000307859 CHKAP35790 457 aa12.34□□□□□ -0.43
TRIM40-205ENST00000307859 GATMP50440 423 aa12.34□□□□□ -0.43
TRIM40-205ENST00000307859 ATN1P54259 1190 aaPredicted RBP12.34□□□□□ -0.43
TRIM40-205ENST00000307859 AIF1P55008 147 aa12.34□□□□□ -0.43
TRIM40-205ENST00000307859 GDF10P55107 478 aa12.34□□□□□ -0.43
TRIM40-205ENST00000307859 EIF3BP55884 814 aaKnown RBP12.34□□□□□ -0.43
TRIM40-205ENST00000307859 MRPL58Q14197 206 aaKnown RBP12.34□□□□□ -0.43
TRIM40-205ENST00000307859 GRIN2CQ14957 1233 aa12.34□□□□□ -0.43
TRIM40-205ENST00000307859 TRIM60Q495X7 471 aa12.34□□□□□ -0.43
TRIM40-205ENST00000307859 PPP6R3Q5H9R7 873 aaPredicted RBP12.34□□□□□ -0.43
TRIM40-205ENST00000307859 CEP85LQ5SZL2 805 aa12.34□□□□□ -0.43
TRIM40-205ENST00000307859 NPNTQ6UXI9 565 aa12.34□□□□□ -0.43
TRIM40-205ENST00000307859 TRMT10CQ7L0Y3 403 aaKnown RBP12.34□□□□□ -0.43
TRIM40-205ENST00000307859 BEND5Q7L4P6 421 aa12.34□□□□□ -0.43
TRIM40-205ENST00000307859 FAM131BQ86XD5 332 aa12.34□□□□□ -0.43
TRIM40-205ENST00000307859 SPATA2LQ8IUW3 424 aaPredicted RBP12.34□□□□□ -0.43
TRIM40-205ENST00000307859 RELL1Q8IUW5 271 aa12.34□□□□□ -0.43
TRIM40-205ENST00000307859 NTAN1Q96AB6 310 aa12.34□□□□□ -0.43
TRIM40-205ENST00000307859 SCLYQ96I15 445 aa12.34□□□□□ -0.43
TRIM40-205ENST00000307859 TMEM175Q9BSA9 504 aa12.34□□□□□ -0.43
TRIM40-205ENST00000307859 MRPL9Q9BYD2 267 aaKnown RBP12.34□□□□□ -0.43
TRIM40-205ENST00000307859 PRDM16Q9HAZ2 1276 aa12.34□□□□□ -0.43
TRIM40-205ENST00000307859 TMBIM4Q9HC24 238 aa12.34□□□□□ -0.43
TRIM40-205ENST00000307859 ADAM28Q9UKQ2 775 aa12.34□□□□□ -0.43
TRIM40-205ENST00000307859 SHROOM3Q8TF72 1996 aa12.34□□□□□ -0.43
TRIM40-205ENST00000307859 PTPRSQ13332 1948 aa12.34□□□□□ -0.43
TRIM40-205ENST00000307859 NUP205Q92621 2012 aa12.34□□□□□ -0.43
TRIM40-205ENST00000307859 GOLGA6CA6NDK9 693 aa12.33□□□□□ -0.43
TRIM40-205ENST00000307859 RIPK2O43353 540 aa12.33□□□□□ -0.43
TRIM40-205ENST00000307859 TADA2AO75478 443 aa12.33□□□□□ -0.43
TRIM40-205ENST00000307859 GOLGA6DP0CG33 693 aa12.33□□□□□ -0.43
TRIM40-205ENST00000307859 ZFXP17010 805 aaPredicted RBP12.33□□□□□ -0.43
TRIM40-205ENST00000307859 FGFR3P22607 806 aa12.33□□□□□ -0.43
TRIM40-205ENST00000307859 BCAR1P56945 870 aa12.33□□□□□ -0.43
TRIM40-205ENST00000307859 ROR1Q01973 937 aa12.33□□□□□ -0.43
TRIM40-205ENST00000307859 TLE2Q04725 743 aa12.33□□□□□ -0.43
TRIM40-205ENST00000307859 DEUP1Q05D60 604 aa12.33□□□□□ -0.43
TRIM40-205ENST00000307859 SCAPQ12770 1279 aa12.33□□□□□ -0.43
TRIM40-205ENST00000307859 GPS1Q13098 491 aa12.33□□□□□ -0.43
TRIM40-205ENST00000307859 MORF4L2Q15014 288 aa12.33□□□□□ -0.43
TRIM40-205ENST00000307859 TERF2Q15554 542 aa12.33□□□□□ -0.43
TRIM40-205ENST00000307859 VARS2Q5ST30 1063 aaKnown RBP12.33□□□□□ -0.43
TRIM40-205ENST00000307859 RNASEH2BQ5TBB1 312 aaKnown RBP12.33□□□□□ -0.43
TRIM40-205ENST00000307859 DENND2CQ68D51 928 aa12.33□□□□□ -0.43
TRIM40-205ENST00000307859 CEP128Q6ZU80 1094 aa12.33□□□□□ -0.43
TRIM40-205ENST00000307859 DCP1BQ8IZD4 617 aaKnown RBP12.33□□□□□ -0.43
TRIM40-205ENST00000307859 ZCCHC9Q8N567 271 aaKnown RBP12.33□□□□□ -0.43
TRIM40-205ENST00000307859 OR2W6PQ8NHA6 318 aa12.33□□□□□ -0.43
TRIM40-205ENST00000307859 RSAD2Q8WXG1 361 aa12.33□□□□□ -0.43
TRIM40-205ENST00000307859 FUBP3Q96I24 572 aaKnown RBP eCLIP12.33□□□□□ -0.43
TRIM40-205ENST00000307859 CSPG4P5Q96PW8 444 aa12.33□□□□□ -0.43
TRIM40-205ENST00000307859 TRIM62Q9BVG3 475 aa12.33□□□□□ -0.43
TRIM40-205ENST00000307859 COLEC11Q9BWP8 271 aa12.33□□□□□ -0.43
TRIM40-205ENST00000307859 SEMA4AQ9H3S1 761 aa12.33□□□□□ -0.43
TRIM40-205ENST00000307859 FAM204AQ9H8W3 233 aa12.33□□□□□ -0.43
TRIM40-205ENST00000307859 WDR6Q9NNW5 1121 aaKnown RBP12.33□□□□□ -0.43
TRIM40-205ENST00000307859 PIGVQ9NUD9 493 aa12.33□□□□□ -0.43
TRIM40-205ENST00000307859 GOLGA6AQ9NYA3 693 aa12.33□□□□□ -0.43
TRIM40-205ENST00000307859 TBX21Q9UL17 535 aa12.33□□□□□ -0.43
TRIM40-205ENST00000307859 TPX2Q9ULW0 747 aaKnown RBP12.33□□□□□ -0.43
TRIM40-205ENST00000307859 SHOC2Q9UQ13 582 aa12.33□□□□□ -0.43
TRIM40-205ENST00000307859 MYO18AQ92614 2054 aaKnown RBP12.33□□□□□ -0.44
TRIM40-205ENST00000307859 MUC3AQ02505 3323 aa12.33□□□□□ -0.44
TRIM40-205ENST00000307859 TNFRSF10BO14763 440 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms