RNA–Protein interactions for RNA: ENST00000307767.12

TVP23B-201, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23B, Length 2,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-201ENST00000307767 ARL5CA6NH57 179 aa17.12■□□□□ 0.33
TVP23B-201ENST00000307767 CAPN15O75808 1086 aa17.12■□□□□ 0.33
TVP23B-201ENST00000307767 KIAA0754O94854 1291 aa17.12■□□□□ 0.33
TVP23B-201ENST00000307767 ZBED1O96006 694 aa17.12■□□□□ 0.33
TVP23B-201ENST00000307767 TM4SF4P48230 202 aa17.12■□□□□ 0.33
TVP23B-201ENST00000307767 ACTN3Q08043 901 aaPredicted RBP17.12■□□□□ 0.33
TVP23B-201ENST00000307767 XRCC4Q13426 336 aa17.12■□□□□ 0.33
TVP23B-201ENST00000307767 SLC1A5Q15758 541 aa17.12■□□□□ 0.33
TVP23B-201ENST00000307767 SLC45A4Q5BKX6 768 aa17.12■□□□□ 0.33
TVP23B-201ENST00000307767 CCSAPQ6IQ19 270 aaPredicted RBP17.12■□□□□ 0.33
TVP23B-201ENST00000307767 KCNT2Q6UVM3 1135 aa17.12■□□□□ 0.33
TVP23B-201ENST00000307767 MAGEB18Q96M61 343 aa17.12■□□□□ 0.33
TVP23B-201ENST00000307767 TCRBV9S1A1TA0A576 114 aa17.12■□□□□ 0.33
TVP23B-201ENST00000307767 HHLA1C9JL84 531 aa17.12■□□□□ 0.33
TVP23B-201ENST00000307767 KBTBD13C9JR72 458 aa17.12■□□□□ 0.33
TVP23B-201ENST00000307767 GCATO75600 419 aa17.12■□□□□ 0.33
TVP23B-201ENST00000307767 VAV1P15498 845 aa17.12■□□□□ 0.33
TVP23B-201ENST00000307767 RPA3P35244 121 aaPredicted RBP17.12■□□□□ 0.33
TVP23B-201ENST00000307767 MAGEA3P43357 314 aa17.12■□□□□ 0.33
TVP23B-201ENST00000307767 FLT3LGP49771 235 aa17.12■□□□□ 0.33
TVP23B-201ENST00000307767 SULT1E1P49888 294 aa17.12■□□□□ 0.33
TVP23B-201ENST00000307767 SCNN1GP51170 649 aa17.12■□□□□ 0.33
TVP23B-201ENST00000307767 MAP3K7CLP57077 242 aa17.12■□□□□ 0.33
TVP23B-201ENST00000307767 DCAF6Q58WW2 860 aa17.12■□□□□ 0.33
TVP23B-201ENST00000307767 ARHGEF18Q6ZSZ5 1173 aa17.12■□□□□ 0.33
TVP23B-201ENST00000307767 BHLHA9Q7RTU4 235 aa17.12■□□□□ 0.33
TVP23B-201ENST00000307767 CTU1Q7Z7A3 348 aaKnown RBP17.12■□□□□ 0.33
TVP23B-201ENST00000307767 PRPF39Q86UA1 669 aaKnown RBP17.12■□□□□ 0.33
TVP23B-201ENST00000307767 DYDC1Q8WWB3 177 aa17.12■□□□□ 0.33
TVP23B-201ENST00000307767 SGSM3Q96HU1 749 aa17.12■□□□□ 0.33
TVP23B-201ENST00000307767 QKIQ96PU8 341 aaKnown RBP eCLIP17.12■□□□□ 0.33
TVP23B-201ENST00000307767 KCNK16Q96T55 309 aa17.12■□□□□ 0.33
TVP23B-201ENST00000307767 POPDC2Q9HBU9 364 aa17.12■□□□□ 0.33
TVP23B-201ENST00000307767 CCT8L1PA6NM43 557 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 CA12O43570 354 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 THP07101 528 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 NOS2P35228 1153 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 PHBP35232 272 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 NR2C2P49116 596 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 DSC3Q14574 896 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 RAB41Q5JT25 222 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 NUGGCQ68CJ6 796 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 SH2D5Q6ZV89 423 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 PACS2Q86VP3 889 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 PALM2Q8IXS6 379 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 ZNF276Q8N554 614 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 PPM1EQ8WY54 764 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 PCED1BQ96HM7 432 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 ARHGEF4Q9NR80 690 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 KRT82Q9NSB4 513 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 SLC38A7Q9NVC3 462 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 PRKAG3Q9UGI9 489 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 TSC2P49815 1807 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 SEPT4O43236 478 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 KRT15P19012 456 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 STX2P32856 288 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 TKTL1P51854 596 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 CACNB2Q08289 660 aaPredicted RBP17.11■□□□□ 0.33
TVP23B-201ENST00000307767 UPP1Q16831 310 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 TIGD5Q53EQ6 642 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 PPP1R21Q6ZMI0 780 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 FAM35AQ86V20 835 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 MICALL1Q8N3F8 863 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 NETO2Q8NC67 525 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 KLHDC9Q8NEP7 349 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 FAM149B1Q96BN6 582 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 TGS1Q96RS0 853 aaKnown RBP17.11■□□□□ 0.33
TVP23B-201ENST00000307767 SYT15Q9BQS2 421 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 PNPLA8Q9NP80 782 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 PIGVQ9NUD9 493 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 NKIRAS1Q9NYS0 192 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 SENP1Q9P0U3 644 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 GIT1Q9Y2X7 761 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 TTLL3Q9Y4R7 772 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 TLL2Q9Y6L7 1015 aa17.11■□□□□ 0.33
TVP23B-201ENST00000307767 YJEFN3A6XGL0 299 aa17.1■□□□□ 0.33
TVP23B-201ENST00000307767 E7ENQ6 273 aa17.1■□□□□ 0.33
TVP23B-201ENST00000307767 M0QZ92 97 aa17.1■□□□□ 0.33
TVP23B-201ENST00000307767 CD52P31358 61 aa17.1■□□□□ 0.33
TVP23B-201ENST00000307767 KLHL38Q2WGJ6 581 aa17.1■□□□□ 0.33
TVP23B-201ENST00000307767 CCDC121Q6ZUS5 278 aa17.1■□□□□ 0.33
TVP23B-201ENST00000307767 TAX1BP1Q86VP1 789 aa17.1■□□□□ 0.33
TVP23B-201ENST00000307767 PSTKQ8IV42 348 aaKnown RBP17.1■□□□□ 0.33
TVP23B-201ENST00000307767 CDKL3Q8IVW4 592 aaPredicted RBP17.1■□□□□ 0.33
TVP23B-201ENST00000307767 SPOCK2Q92563 424 aa17.1■□□□□ 0.33
TVP23B-201ENST00000307767 ULBP1Q9BZM6 244 aa17.1■□□□□ 0.33
TVP23B-201ENST00000307767 KDM4CQ9H3R0 1056 aa17.1■□□□□ 0.33
TVP23B-201ENST00000307767 WDR6Q9NNW5 1121 aaKnown RBP17.1■□□□□ 0.33
TVP23B-201ENST00000307767 PADI3Q9ULW8 664 aa17.1■□□□□ 0.33
TVP23B-201ENST00000307767 CASTOR2A6NHX0 329 aa17.09■□□□□ 0.33
TVP23B-201ENST00000307767 ZNF623O75123 536 aa17.09■□□□□ 0.33
TVP23B-201ENST00000307767 ASGR1P07306 291 aa17.09■□□□□ 0.33
TVP23B-201ENST00000307767 ZFXP17010 805 aaPredicted RBP17.09■□□□□ 0.33
TVP23B-201ENST00000307767 GRIA1P42261 906 aa17.09■□□□□ 0.33
TVP23B-201ENST00000307767 DAOAP59103 153 aa17.09■□□□□ 0.33
TVP23B-201ENST00000307767 PRKCZQ05513 592 aa17.09■□□□□ 0.33
TVP23B-201ENST00000307767 KBTBD12Q3ZCT8 623 aa17.09■□□□□ 0.33
TVP23B-201ENST00000307767 MFSD14CQ5VZR4 134 aa17.09■□□□□ 0.33
TVP23B-201ENST00000307767 TP53INP2Q8IXH6 220 aa17.09■□□□□ 0.33
TVP23B-201ENST00000307767 MCUQ8NE86 351 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms