RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 ARP10275 920 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 TCEA1P23193 301 aaKnown RBP12.98□□□□□ -0.33
USP38-201ENST00000307017 USP11P51784 963 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 CSTF3Q12996 717 aaKnown RBP12.98□□□□□ -0.33
USP38-201ENST00000307017 OLFML1Q6UWY5 402 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 PROSER1Q86XN7 944 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 ARHGEF19Q8IW93 802 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 LACRTQ9GZZ8 138 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 GPAMQ9HCL2 828 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 TBX20Q9UMR3 447 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 STX7O15400 261 aaKnown RBP12.98□□□□□ -0.33
USP38-201ENST00000307017 SLC16A3O15427 465 aaKnown RBP12.98□□□□□ -0.33
USP38-201ENST00000307017 EXTL3O43909 919 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 SNUPNO95149 360 aaKnown RBP12.98□□□□□ -0.33
USP38-201ENST00000307017 JCHAINP01591 159 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 MBL2P11226 248 aaPredicted RBP12.98□□□□□ -0.33
USP38-201ENST00000307017 FMO4P31512 558 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 ABATP80404 500 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 ZNF543Q08ER8 600 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 KCNB1Q14721 858 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 LRRC74BQ6ZQY2 392 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 RTKN2Q8IZC4 609 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 ZSWIM1Q9BR11 485 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 SMPD4Q9NXE4 827 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.98□□□□□ -0.33
USP38-201ENST00000307017 DMGDHQ9UI17 866 aaKnown RBP12.98□□□□□ -0.33
USP38-201ENST00000307017 PCDHGA4Q9Y5G9 962 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 USP6P35125 1406 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 RPL21P46778 160 aaKnown RBP12.97□□□□□ -0.33
USP38-201ENST00000307017 ALDH1A3P47895 512 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 CCR4P51679 360 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 EFHC1Q5JVL4 640 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 AGAP9Q5VTM2 703 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 ELMSAN1Q6PJG2 1045 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 BPIFB6Q8NFQ5 453 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 ZNF512BQ96KM6 892 aaPredicted RBP12.97□□□□□ -0.33
USP38-201ENST00000307017 RIC8BQ9NVN3 520 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 ZNF521Q96K83 1311 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 TCEA3O75764 348 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 NR4A1P22736 598 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 ALDH5A1P51649 535 aaPredicted RBP12.97□□□□□ -0.33
USP38-201ENST00000307017 DDR2Q16832 855 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 STK32CQ86UX6 486 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 UBE2J2Q8N2K1 259 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 CHURC1-FNTBB4DL54 471 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 ERVV-1B6SEH8 477 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 BTN3A3O00478 584 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 RGS4P49798 205 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 ADARP55265 1226 aaKnown RBP12.97□□□□□ -0.33
USP38-201ENST00000307017 GRIK3Q13003 919 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 AASDHQ4L235 1098 aaPredicted RBP12.97□□□□□ -0.33
USP38-201ENST00000307017 UVRAGQ9P2Y5 699 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 LSM7Q9UK45 103 aaKnown RBP12.97□□□□□ -0.33
USP38-201ENST00000307017 DAGLAQ9Y4D2 1042 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 CNTNAP5Q8WYK1 1306 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 TMEM191CA6NGB0 347 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 PROCP04070 461 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 ENO2P09104 434 aaPredicted RBP12.97□□□□□ -0.33
USP38-201ENST00000307017 NUP62P37198 522 aaPredicted RBP12.97□□□□□ -0.33
USP38-201ENST00000307017 SERPINB8P50452 374 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 CNTN1Q12860 1018 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 EIF2B5Q13144 721 aaKnown RBP12.97□□□□□ -0.33
USP38-201ENST00000307017 RAPSNQ13702 412 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 NEK10Q6ZWH5 1172 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 ENOSF1Q7L5Y1 443 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 LPCAT1Q8NF37 534 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 COL26A1Q96A83 441 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 PLEKHG4BQ96PX9 1271 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 MID1IP1Q9NPA3 183 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 TRPC5OSA6NMA1 111 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 HPGDP15428 266 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 SLC25A3Q00325 362 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 FNBP1LQ5T0N5 605 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 C2orf73Q8N5S3 287 aaPredicted RBP12.97□□□□□ -0.33
USP38-201ENST00000307017 FLAD1Q8NFF5 587 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 MAGEE2Q8TD90 523 aaPredicted RBP12.97□□□□□ -0.33
USP38-201ENST00000307017 SH3TC2Q8TF17 1288 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 CDRT15Q96T59 188 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 EPB41L1Q9H4G0 881 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 TUT1Q9H6E5 874 aaKnown RBP12.97□□□□□ -0.33
USP38-201ENST00000307017 DSEQ9UL01 958 aa12.97□□□□□ -0.33
USP38-201ENST00000307017 CFAP74Q9C0B2 1584 aa12.96□□□□□ -0.33
USP38-201ENST00000307017 F8VZ95 297 aa12.96□□□□□ -0.33
USP38-201ENST00000307017 SOAT2O75908 522 aa12.96□□□□□ -0.33
USP38-201ENST00000307017 CYP2F1P24903 491 aa12.96□□□□□ -0.33
USP38-201ENST00000307017 YWHAQP27348 245 aa12.96□□□□□ -0.33
USP38-201ENST00000307017 C21orf59P57076 290 aa12.96□□□□□ -0.33
USP38-201ENST00000307017 PRKCQQ04759 706 aa12.96□□□□□ -0.33
USP38-201ENST00000307017 RALGDSQ12967 914 aa12.96□□□□□ -0.33
USP38-201ENST00000307017 GRB10Q13322 594 aa12.96□□□□□ -0.33
USP38-201ENST00000307017 NCF4Q15080 339 aa12.96□□□□□ -0.33
USP38-201ENST00000307017 SCUBE3Q8IX30 993 aa12.96□□□□□ -0.33
USP38-201ENST00000307017 TSEN2Q8NCE0 465 aaKnown RBP12.96□□□□□ -0.33
USP38-201ENST00000307017 SERPINB12Q96P63 405 aa12.96□□□□□ -0.33
USP38-201ENST00000307017 AGPAT3Q9NRZ7 376 aa12.96□□□□□ -0.33
USP38-201ENST00000307017 EHD3Q9NZN3 535 aa12.96□□□□□ -0.33
USP38-201ENST00000307017 LAMC1P11047 1609 aa12.96□□□□□ -0.33
USP38-201ENST00000307017 CCDC154A6NI56 674 aa12.96□□□□□ -0.33
USP38-201ENST00000307017 VPS26AO75436 327 aa12.96□□□□□ -0.33
USP38-201ENST00000307017 ST13P50502 369 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms