RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 LZICQ8WZA0 190 aa16.15■□□□□ 0.18
UBAP1-201ENST00000297661 COPS5Q92905 334 aa16.15■□□□□ 0.18
UBAP1-201ENST00000297661 MS4A4AQ96JQ5 239 aa16.15■□□□□ 0.18
UBAP1-201ENST00000297661 VPS11Q9H270 941 aa16.15■□□□□ 0.18
UBAP1-201ENST00000297661 SUDS3Q9H7L9 328 aaPredicted RBP16.15■□□□□ 0.18
UBAP1-201ENST00000297661 SSU72Q9NP77 194 aaKnown RBP16.15■□□□□ 0.18
UBAP1-201ENST00000297661 DNAJB4Q9UDY4 337 aa16.15■□□□□ 0.18
UBAP1-201ENST00000297661 SHOC2Q9UQ13 582 aa16.15■□□□□ 0.18
UBAP1-201ENST00000297661 HTTP42858 3142 aa16.15■□□□□ 0.18
UBAP1-201ENST00000297661 ENO1P06733 434 aaKnown RBP16.15■□□□□ 0.18
UBAP1-201ENST00000297661 SLC10A3P09131 477 aa16.15■□□□□ 0.18
UBAP1-201ENST00000297661 EIF4BP23588 611 aaKnown RBP16.15■□□□□ 0.18
UBAP1-201ENST00000297661 ICAM3P32942 547 aa16.15■□□□□ 0.18
UBAP1-201ENST00000297661 GEMIN4P57678 1058 aaKnown RBP16.15■□□□□ 0.18
UBAP1-201ENST00000297661 IGBP1P78318 339 aa16.15■□□□□ 0.18
UBAP1-201ENST00000297661 HPCAP84074 193 aa16.15■□□□□ 0.18
UBAP1-201ENST00000297661 CDO1Q16878 200 aa16.15■□□□□ 0.18
UBAP1-201ENST00000297661 CCDC142Q17RM4 750 aa16.15■□□□□ 0.18
UBAP1-201ENST00000297661 C1orf146Q5VVC0 180 aa16.15■□□□□ 0.18
UBAP1-201ENST00000297661 ALYREFQ86V81 257 aaKnown RBP16.15■□□□□ 0.18
UBAP1-201ENST00000297661 PDSS2Q86YH6 399 aa16.15■□□□□ 0.18
UBAP1-201ENST00000297661 THTPAQ9BU02 230 aa16.15■□□□□ 0.18
UBAP1-201ENST00000297661 DDX56Q9NY93 547 aaKnown RBP16.15■□□□□ 0.18
UBAP1-201ENST00000297661 SLC7A8Q9UHI5 535 aa16.15■□□□□ 0.18
UBAP1-201ENST00000297661 XPO7Q9UIA9 1087 aaKnown RBP16.15■□□□□ 0.18
UBAP1-201ENST00000297661 TM7SF2O76062 418 aa16.14■□□□□ 0.17
UBAP1-201ENST00000297661 MIPP30301 263 aa16.14■□□□□ 0.17
UBAP1-201ENST00000297661 TMEM62Q0P6H9 643 aa16.14■□□□□ 0.17
UBAP1-201ENST00000297661 TRIM42Q8IWZ5 723 aa16.14■□□□□ 0.17
UBAP1-201ENST00000297661 PALM2Q8IXS6 379 aa16.14■□□□□ 0.17
UBAP1-201ENST00000297661 PPIL6Q8IXY8 311 aa16.14■□□□□ 0.17
UBAP1-201ENST00000297661 PIWIL1Q96J94 861 aaKnown RBP16.14■□□□□ 0.17
UBAP1-201ENST00000297661 IQCF3P0C7M6 154 aa16.14■□□□□ 0.17
UBAP1-201ENST00000297661 RGS2P41220 211 aa16.14■□□□□ 0.17
UBAP1-201ENST00000297661 EIF3EP60228 445 aaKnown RBP16.14■□□□□ 0.17
UBAP1-201ENST00000297661 PPIL2Q13356 520 aa16.14■□□□□ 0.17
UBAP1-201ENST00000297661 MDH1BQ5I0G3 518 aa16.14■□□□□ 0.17
UBAP1-201ENST00000297661 FAM160B1Q5W0V3 765 aa16.14■□□□□ 0.17
UBAP1-201ENST00000297661 TREML1Q86YW5 311 aa16.14■□□□□ 0.17
UBAP1-201ENST00000297661 NAT8LQ8N9F0 302 aa16.14■□□□□ 0.17
UBAP1-201ENST00000297661 SEPT1Q8WYJ6 367 aa16.14■□□□□ 0.17
UBAP1-201ENST00000297661 SIX4Q9UIU6 781 aa16.14■□□□□ 0.17
UBAP1-201ENST00000297661 A0A0J9YVX5 310 aa16.13■□□□□ 0.17
UBAP1-201ENST00000297661 ZBTB42B2RXF5 422 aa16.13■□□□□ 0.17
UBAP1-201ENST00000297661 TNNC2P02585 160 aa16.13■□□□□ 0.17
UBAP1-201ENST00000297661 GRM2Q14416 872 aa16.13■□□□□ 0.17
UBAP1-201ENST00000297661 SFT2D3Q587I9 215 aa16.13■□□□□ 0.17
UBAP1-201ENST00000297661 FAXCQ5TGI0 409 aa16.13■□□□□ 0.17
UBAP1-201ENST00000297661 ATF7IP2Q5U623 682 aa16.13■□□□□ 0.17
UBAP1-201ENST00000297661 ZBTB8OSQ8IWT0 167 aa16.13■□□□□ 0.17
UBAP1-201ENST00000297661 CCDC33Q8N5R6 958 aa16.13■□□□□ 0.17
UBAP1-201ENST00000297661 MTBPQ96DY7 904 aa16.13■□□□□ 0.17
UBAP1-201ENST00000297661 PEBP4Q96S96 227 aa16.13■□□□□ 0.17
UBAP1-201ENST00000297661 ZDHHC7Q9NXF8 308 aa16.13■□□□□ 0.17
UBAP1-201ENST00000297661 PTTG2Q9NZH5 202 aa16.13■□□□□ 0.17
UBAP1-201ENST00000297661 PLA2G4CQ9UP65 541 aa16.13■□□□□ 0.17
UBAP1-201ENST00000297661 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.13■□□□□ 0.17
UBAP1-201ENST00000297661 NOP56O00567 594 aaKnown RBP16.13■□□□□ 0.17
UBAP1-201ENST00000297661 TM9SF1O15321 606 aa16.13■□□□□ 0.17
UBAP1-201ENST00000297661 PGM3O95394 542 aa16.13■□□□□ 0.17
UBAP1-201ENST00000297661 TGDSO95455 350 aa16.13■□□□□ 0.17
UBAP1-201ENST00000297661 ITGB3P05106 788 aa16.13■□□□□ 0.17
UBAP1-201ENST00000297661 ASPHQ12797 758 aa16.13■□□□□ 0.17
UBAP1-201ENST00000297661 SNAPC2Q13487 334 aa16.13■□□□□ 0.17
UBAP1-201ENST00000297661 C15orf59Q2T9L4 293 aaPredicted RBP16.13■□□□□ 0.17
UBAP1-201ENST00000297661 EFHC2Q5JST6 749 aa16.13■□□□□ 0.17
UBAP1-201ENST00000297661 C1orf228Q6PIY5 440 aa16.13■□□□□ 0.17
UBAP1-201ENST00000297661 XYLT1Q86Y38 959 aa16.13■□□□□ 0.17
UBAP1-201ENST00000297661 DNERQ8NFT8 737 aa16.13■□□□□ 0.17
UBAP1-201ENST00000297661 SPATA18Q8TC71 538 aa16.13■□□□□ 0.17
UBAP1-201ENST00000297661 ZNF232Q9UNY5 417 aa16.13■□□□□ 0.17
UBAP1-201ENST00000297661 FAM237BA0A1B0GVD1 139 aa16.12■□□□□ 0.17
UBAP1-201ENST00000297661 BTBD19C9JJ37 291 aa16.12■□□□□ 0.17
UBAP1-201ENST00000297661 M0QYV0 167 aa16.12■□□□□ 0.17
UBAP1-201ENST00000297661 FAM155BO75949 473 aa16.12■□□□□ 0.17
UBAP1-201ENST00000297661 RBP3P10745 1247 aa16.12■□□□□ 0.17
UBAP1-201ENST00000297661 PIM1P11309 404 aaPredicted RBP16.12■□□□□ 0.17
UBAP1-201ENST00000297661 UQCRBP14927 111 aa16.12■□□□□ 0.17
UBAP1-201ENST00000297661 EFNA5P52803 228 aa16.12■□□□□ 0.17
UBAP1-201ENST00000297661 YWHAEP62258 255 aaKnown RBP16.12■□□□□ 0.17
UBAP1-201ENST00000297661 KDSRQ06136 332 aa16.12■□□□□ 0.17
UBAP1-201ENST00000297661 TMEM259Q4ZIN3 620 aa16.12■□□□□ 0.17
UBAP1-201ENST00000297661 TMCO4Q5TGY1 634 aa16.12■□□□□ 0.17
UBAP1-201ENST00000297661 NIPA2Q8N8Q9 360 aa16.12■□□□□ 0.17
UBAP1-201ENST00000297661 C1orf127Q8N9H9 656 aa16.12■□□□□ 0.17
UBAP1-201ENST00000297661 DGCR14Q96DF8 476 aaKnown RBP16.12■□□□□ 0.17
UBAP1-201ENST00000297661 ANKRD36BP1Q96IX9 119 aa16.12■□□□□ 0.17
UBAP1-201ENST00000297661 ELOVL4Q9GZR5 314 aa16.12■□□□□ 0.17
UBAP1-201ENST00000297661 GPAMQ9HCL2 828 aa16.12■□□□□ 0.17
UBAP1-201ENST00000297661 GPATCH2LQ9NWQ4 482 aa16.12■□□□□ 0.17
UBAP1-201ENST00000297661 NDUFA13Q9P0J0 144 aa16.12■□□□□ 0.17
UBAP1-201ENST00000297661 PCDHGC3Q9UN70 934 aa16.12■□□□□ 0.17
UBAP1-201ENST00000297661 ELK3P41970 407 aa16.12■□□□□ 0.17
UBAP1-201ENST00000297661 PRKD1Q15139 912 aaPredicted RBP16.12■□□□□ 0.17
UBAP1-201ENST00000297661 FAM102AQ5T9C2 384 aaPredicted RBP16.12■□□□□ 0.17
UBAP1-201ENST00000297661 FAM91A1Q658Y4 838 aa16.12■□□□□ 0.17
UBAP1-201ENST00000297661 KLC3Q6P597 504 aa16.12■□□□□ 0.17
UBAP1-201ENST00000297661 MPZL3Q6UWV2 235 aa16.12■□□□□ 0.17
UBAP1-201ENST00000297661 BBS12Q6ZW61 710 aa16.12■□□□□ 0.17
UBAP1-201ENST00000297661 BANPQ8N9N5 519 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms