RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 ZBED1O96006 694 aa15.35■□□□□ 0.05
SPIDR-201ENST00000297423 PABPC4LP0CB38 370 aaKnown RBP15.35■□□□□ 0.05
SPIDR-201ENST00000297423 CRABP2P29373 138 aa15.35■□□□□ 0.05
SPIDR-201ENST00000297423 HADHBP55084 474 aaKnown RBP15.35■□□□□ 0.05
SPIDR-201ENST00000297423 CDH6P55285 790 aa15.35■□□□□ 0.05
SPIDR-201ENST00000297423 PATL1Q86TB9 770 aaKnown RBP15.35■□□□□ 0.05
SPIDR-201ENST00000297423 YIPF2Q9BWQ6 316 aa15.35■□□□□ 0.05
SPIDR-201ENST00000297423 UNKQ9C0B0 810 aaKnown RBP15.35■□□□□ 0.05
SPIDR-201ENST00000297423 ARMC7Q9H6L4 198 aa15.35■□□□□ 0.05
SPIDR-201ENST00000297423 PCDH9Q9HC56 1237 aa15.35■□□□□ 0.05
SPIDR-201ENST00000297423 SH3GLB1Q9Y371 365 aa15.35■□□□□ 0.05
SPIDR-201ENST00000297423 MYH11P35749 1972 aa15.35■□□□□ 0.05
SPIDR-201ENST00000297423 TRIM43BA6NCK2 446 aa15.35■□□□□ 0.05
SPIDR-201ENST00000297423 TRPC3Q13507 836 aa15.35■□□□□ 0.05
SPIDR-201ENST00000297423 TLR1Q15399 786 aa15.35■□□□□ 0.05
SPIDR-201ENST00000297423 MYLK3Q32MK0 819 aa15.35■□□□□ 0.05
SPIDR-201ENST00000297423 RBM12BQ8IXT5 1001 aaKnown RBP15.35■□□□□ 0.05
SPIDR-201ENST00000297423 HELQQ8TDG4 1101 aa15.35■□□□□ 0.05
SPIDR-201ENST00000297423 HOXC10Q9NYD6 342 aa15.35■□□□□ 0.05
SPIDR-201ENST00000297423 POMPQ9Y244 141 aa15.35■□□□□ 0.05
SPIDR-201ENST00000297423 ADM5C9JUS6 153 aa15.35■□□□□ 0.05
SPIDR-201ENST00000297423 EEF1B2P24534 225 aaKnown RBP15.35■□□□□ 0.05
SPIDR-201ENST00000297423 CDH15P55291 814 aa15.35■□□□□ 0.05
SPIDR-201ENST00000297423 ITGA9Q13797 1035 aa15.35■□□□□ 0.05
SPIDR-201ENST00000297423 ADGRD1Q6QNK2 874 aa15.35■□□□□ 0.05
SPIDR-201ENST00000297423 SLC26A11Q86WA9 606 aa15.35■□□□□ 0.05
SPIDR-201ENST00000297423 TSPYL2Q9H2G4 693 aaPredicted RBP15.35■□□□□ 0.05
SPIDR-201ENST00000297423 ZNF408Q9H9D4 720 aa15.35■□□□□ 0.05
SPIDR-201ENST00000297423 SLC38A10Q9HBR0 1119 aa15.35■□□□□ 0.05
SPIDR-201ENST00000297423 SLC17A6Q9P2U8 582 aa15.35■□□□□ 0.05
SPIDR-201ENST00000297423 PCDHGB4Q9UN71 923 aa15.35■□□□□ 0.05
SPIDR-201ENST00000297423 GNEQ9Y223 722 aaKnown RBP15.35■□□□□ 0.05
SPIDR-201ENST00000297423 PCDHGB5Q9Y5G0 923 aa15.35■□□□□ 0.05
SPIDR-201ENST00000297423 NOL3O60936 208 aaKnown RBP15.34■□□□□ 0.05
SPIDR-201ENST00000297423 CD48P09326 243 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 PSMC3P17980 439 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 YWHABP31946 246 aaKnown RBP15.34■□□□□ 0.05
SPIDR-201ENST00000297423 NETO2Q8NC67 525 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 OLIG1Q8TAK6 271 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 CXorf38Q8TB03 319 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 RMDN3Q96TC7 470 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 NGRNQ9NPE2 291 aaKnown RBP15.34■□□□□ 0.05
SPIDR-201ENST00000297423 CDH22Q9UJ99 828 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 A0A0B4J269 797 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 ROR1Q01973 937 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 LPIN1Q14693 890 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 SPDYAQ5MJ70 313 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 ZNF786Q8N393 782 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 LENG9Q96B70 501 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 CMTM5Q96DZ9 223 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 DMAC2Q9NW81 257 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 GPATCH2LQ9NWQ4 482 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 PTTG2Q9NZH5 202 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 PCSK6P29122 969 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 CES3Q6UWW8 571 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 KATNAL2Q8IYT4 538 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 TTC13Q8NBP0 860 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 SCYL1Q96KG9 808 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 SNX13Q9Y5W8 968 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 ZNF536O15090 1300 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 ITM2AO43736 263 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 KLHL2O95198 593 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 TNFAIP8O95379 198 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 PDGFRBP09619 1106 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 TYK2P29597 1187 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 TFAMQ00059 246 aaKnown RBP15.34■□□□□ 0.05
SPIDR-201ENST00000297423 MMRN1Q13201 1228 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 CMPK2Q5EBM0 449 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 N4BP2L1Q5TBK1 243 aaPredicted RBP15.34■□□□□ 0.05
SPIDR-201ENST00000297423 WDR78Q5VTH9 848 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 FBXL19Q6PCT2 694 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 CYP2R1Q6VVX0 501 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 TMC7Q7Z402 723 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 STRIP2Q9ULQ0 834 aa15.34■□□□□ 0.05
SPIDR-201ENST00000297423 KIF13BQ9NQT8 1826 aa15.33■□□□□ 0.04
SPIDR-201ENST00000297423 CXorf49A8MYA2 514 aaPredicted RBP15.33■□□□□ 0.04
SPIDR-201ENST00000297423 CA8P35219 290 aa15.33■□□□□ 0.04
SPIDR-201ENST00000297423 SLC1A6P48664 564 aa15.33■□□□□ 0.04
SPIDR-201ENST00000297423 GPAT2Q6NUI2 795 aa15.33■□□□□ 0.04
SPIDR-201ENST00000297423 DAW1Q8N136 415 aa15.33■□□□□ 0.04
SPIDR-201ENST00000297423 DCAKDQ8WVC6 231 aa15.33■□□□□ 0.04
SPIDR-201ENST00000297423 MOCOSQ96EN8 888 aa15.33■□□□□ 0.04
SPIDR-201ENST00000297423 KCNK16Q96T55 309 aa15.33■□□□□ 0.04
SPIDR-201ENST00000297423 FER1L6Q2WGJ9 1857 aa15.33■□□□□ 0.04
SPIDR-201ENST00000297423 SIPA1L1O43166 1804 aa15.33■□□□□ 0.04
SPIDR-201ENST00000297423 SYNJ2BP-COX16A0A087WUM0 186 aa15.33■□□□□ 0.04
SPIDR-201ENST00000297423 ARHGEF37A1IGU5 675 aa15.33■□□□□ 0.04
SPIDR-201ENST00000297423 VWA5AO00534 786 aa15.33■□□□□ 0.04
SPIDR-201ENST00000297423 ENTPD1P49961 510 aa15.33■□□□□ 0.04
SPIDR-201ENST00000297423 RAP1GDS1P52306 607 aa15.33■□□□□ 0.04
SPIDR-201ENST00000297423 FSTL1Q12841 308 aa15.33■□□□□ 0.04
SPIDR-201ENST00000297423 MTERF2Q49AM1 385 aa15.33■□□□□ 0.04
SPIDR-201ENST00000297423 SLCO2A1Q92959 643 aa15.33■□□□□ 0.04
SPIDR-201ENST00000297423 OTUD5Q96G74 571 aa15.33■□□□□ 0.04
SPIDR-201ENST00000297423 TMEM79Q9BSE2 394 aa15.33■□□□□ 0.04
SPIDR-201ENST00000297423 ELP3Q9H9T3 547 aa15.33■□□□□ 0.04
SPIDR-201ENST00000297423 COX16Q9P0S2 106 aa15.33■□□□□ 0.04
SPIDR-201ENST00000297423 SEPT9Q9UHD8 586 aaPredicted RBP15.33■□□□□ 0.04
SPIDR-201ENST00000297423 TPD52L2O43399 206 aaKnown RBP15.33■□□□□ 0.04
SPIDR-201ENST00000297423 MCF2P10911 925 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms