RNA–Protein interactions for RNA: ENST00000296859.10

RAPGEF6-201, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF6, Length 5,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-201ENST00000296859 HAPLN3Q96S86 360 aa4.4□□□□□ -1.7
RAPGEF6-201ENST00000296859 DPYSL5Q9BPU6 564 aa4.4□□□□□ -1.7
RAPGEF6-201ENST00000296859 TMEM47Q9BQJ4 181 aa4.4□□□□□ -1.7
RAPGEF6-201ENST00000296859 CDADC1Q9BWV3 514 aa4.4□□□□□ -1.7
RAPGEF6-201ENST00000296859 INTS9Q9NV88 658 aaKnown RBP4.4□□□□□ -1.7
RAPGEF6-201ENST00000296859 MAT2BQ9NZL9 334 aa4.4□□□□□ -1.7
RAPGEF6-201ENST00000296859 ANGPT4Q9Y264 503 aa4.4□□□□□ -1.7
RAPGEF6-201ENST00000296859 INVSQ9Y283 1065 aa4.4□□□□□ -1.7
RAPGEF6-201ENST00000296859 RWDD3Q9Y3V2 267 aa4.4□□□□□ -1.7
RAPGEF6-201ENST00000296859 PCDHA13Q9Y5I0 950 aa4.4□□□□□ -1.7
RAPGEF6-201ENST00000296859 AK9Q5TCS8 1911 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 NEDD8-MDP1E9PL57 170 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 AP3B1O00203 1094 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 FFAR2O15552 330 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 MAN1A2O60476 641 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 CYP2A7P20853 494 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 GABRR2P28476 465 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 RRM2P31350 389 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 POLR2LP62875 67 aaKnown RBP4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 RUNX1T1Q06455 604 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 STX4Q12846 297 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 ORC1Q13415 861 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 TRIP10Q15642 601 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 GALNTL6Q49A17 601 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 NFRKBQ6P4R8 1299 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 CRTC3Q6UUV7 619 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 RNF19BQ6ZMZ0 732 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 CYP4Z1Q86W10 505 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 FAM9CQ8IZT9 166 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 GPC2Q8N158 579 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 MAB21L3Q8N8X9 362 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 ADCY4Q8NFM4 1077 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 FAM81AQ8TBF8 368 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 OVCA2Q8WZ82 227 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 P2RX5Q93086 422 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 FUBP3Q96I24 572 aaKnown RBP eCLIP4.4□□□□□ -1.712e-11■■■■■ 55.8
RAPGEF6-201ENST00000296859 DESI2Q9BSY9 194 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 KIFC1Q9BW19 673 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 MRPS26Q9BYN8 205 aaKnown RBP4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 ZMYND12Q9H0C1 365 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 OSBPL5Q9H0X9 879 aaPredicted RBP4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 POLR1BQ9H9Y6 1135 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 SLAMF7Q9NQ25 335 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 KLHL1Q9NR64 748 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 DNAJC28Q9NX36 388 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 IMPAD1Q9NX62 359 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 PPP2R3BQ9Y5P8 575 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 SNCAIPQ9Y6H5 919 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 GAKO14976 1311 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 MYO5CQ9NQX4 1742 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 URADA6NGE7 173 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 RNF103O00237 685 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 NFIBO00712 420 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 SOAT2O75908 522 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 RTN3O95197 1032 aaPredicted RBP4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 CCNDBP1O95273 360 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 IL33O95760 270 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 CCNYL3P0C7X3 344 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 NR2F1P10589 423 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 TYMPP19971 482 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 RPL4P36578 427 aaKnown RBP4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 MAPKAPK2P49137 400 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 CDH13P55290 713 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 RGS1Q08116 209 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 NCOA4Q13772 614 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 CCNIQ14094 377 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 DHX34Q14147 1143 aaKnown RBP4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 CYP51A1Q16850 503 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 SEZ6Q53EL9 994 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 EFHC1Q5JVL4 640 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 ERMARDQ5T6L9 678 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 PRICKLE2Q7Z3G6 844 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 COL23A1Q86Y22 540 aaPredicted RBP4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 PHYKPLQ8IUZ5 450 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 ZC3H7AQ8IWR0 971 aaKnown RBP4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 RHOT1Q8IXI2 618 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 DEPDC4Q8N2C3 294 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 TMEM156Q8N614 296 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 USP38Q8NB14 1042 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 CALML6Q8TD86 181 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 SGCDQ92629 289 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 SGF29Q96ES7 293 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 DCLK3Q9C098 648 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 TASP1Q9H6P5 420 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 YY1AP1Q9H869 796 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 NT5MQ9NPB1 228 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 RGS18Q9NS28 235 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.4□□□□□ -1.713e-7■■■■□ 20.2
RAPGEF6-201ENST00000296859 IP6K2Q9UHH9 426 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 RABGEF1Q9UJ41 708 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 RNF112Q9ULX5 631 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 GRIN2AQ12879 1464 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 KIF14Q15058 1648 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 H3BNH8 94 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 PER2O15055 1255 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 NKRFO15226 690 aaKnown RBP eCLIP4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 IL18RAPO95256 599 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 TUBBP07437 444 aa4.4□□□□□ -1.71
RAPGEF6-201ENST00000296859 PFKFB1P16118 471 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms