RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 CBWD5Q5RIA9 395 aa18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 LRRC8EQ6NSJ5 796 aa18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 SH3RF1Q7Z6J0 888 aa18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 ACTRT1Q8TDG2 376 aa18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 IL17RAQ96F46 866 aa18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 PPP1R36Q96LQ0 422 aa18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 TMEM121Q9BTD3 319 aa18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 RIPK3Q9Y572 518 aa18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 E2F8A0AVK6 867 aa18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 MAGEB16A2A368 324 aa18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 YBX3P16989 372 aaKnown RBP eCLIP18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 PSMD5Q16401 504 aa18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 SGO1Q5FBB7 561 aa18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 ANO5Q75V66 913 aa18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 ADAM32Q8TC27 787 aa18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 HDCP19113 662 aa18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 NLRP9Q7RTR0 991 aa18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 PCYOX1LQ8NBM8 494 aa18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 UPF1Q92900 1129 aaKnown RBP eCLIP18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 PRDM16Q9HAZ2 1276 aa18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 FAM50BQ9Y247 325 aa18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 A0A0G2JLL6 359 aaPredicted RBP18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 PLA2G4AP47712 749 aa18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 EVX2Q03828 476 aa18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 PRRT2Q7Z6L0 340 aaPredicted RBP18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 WNT8BQ93098 351 aa18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 RNF19AQ9NV58 838 aa18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 SEPT4O43236 478 aa18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 POLR2LP62875 67 aaKnown RBP18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 PPP3CAQ08209 521 aa18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 SLC29A2Q14542 456 aa18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 LRRC52Q8N7C0 313 aa18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 FBXO36Q8NEA4 188 aa18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 FAM161BQ96MY7 647 aa18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 TKTL2Q9H0I9 626 aa18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 SLC28A3Q9HAS3 691 aa18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 RNF112Q9ULX5 631 aa18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 CDYLQ9Y232 598 aa18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 DUSP10Q9Y6W6 482 aa18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 ASGR1P07306 291 aa18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 GRK3P35626 688 aa18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 NAA30Q147X3 362 aaPredicted RBP18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 FNDC3BQ53EP0 1204 aaKnown RBP18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 DENND1BQ6P3S1 775 aa18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 OSGEPL1Q9H4B0 414 aa18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 CHCHD3Q9NX63 227 aaKnown RBP18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 TBC1D3BA6NDS4 549 aa18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 IL10P22301 178 aa18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 CHKAP35790 457 aa18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 ILF2Q12905 390 aaKnown RBP18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 TAGAPQ8N103 731 aa18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 MAML3Q96JK9 1138 aa18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 C2orf49Q9BVC5 232 aaPredicted RBP18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 ETNK1Q9HBU6 452 aa18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 UBA2Q9UBT2 640 aaPredicted RBP18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 DNMT3LQ9UJW3 386 aa18.22■□□□□ 0.51
CDC42EP3-201ENST00000295324 ASTN2O75129 1339 aaPredicted RBP18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 IFRD1O00458 451 aaPredicted RBP18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 SPTLC1O15269 473 aa18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 NOL9Q5SY16 702 aaKnown RBP18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 PRMT1Q99873 361 aaKnown RBP18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 CORO1BQ9BR76 489 aa18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 MRPL1Q9BYD6 325 aaKnown RBP18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 SPASTQ9UBP0 616 aa18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 OR6C75A6NL08 312 aa18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 IGF2BP3O00425 579 aaKnown RBP eCLIP18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 TRIM16O95361 564 aa18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 LAG3P18627 525 aa18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 SERPINB8P50452 374 aa18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 CDH17Q12864 832 aa18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 TUSC3Q13454 348 aa18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 KCNA10Q16322 511 aa18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 B3GALNT2Q8NCR0 500 aa18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 APBB2Q92870 758 aa18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 DNAJC19Q96DA6 116 aa18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 SGF29Q96ES7 293 aa18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 C1QTNF7Q9BXJ2 289 aa18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 ING2Q9H160 280 aa18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 SEPT3Q9UH03 358 aa18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 ARL2BPQ9Y2Y0 163 aa18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 FZD9O00144 591 aa18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 CAND2O75155 1236 aa18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 GLRA3O75311 464 aa18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 DARSP14868 501 aaKnown RBP18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 CHN1P15882 459 aa18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 ALDH18A1P54886 795 aaKnown RBP18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 REXO1L1PQ8IX06 675 aa18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 E2F7Q96AV8 911 aa18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 LACRTQ9GZZ8 138 aa18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 STX18Q9P2W9 335 aaKnown RBP18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 PPP1R37O75864 691 aa18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 CYP2A6P11509 494 aaPredicted RBP18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 EPB42P16452 691 aa18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 NCKAP1LP55160 1127 aa18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 WDR59Q6PJI9 974 aa18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 ABTB1Q969K4 478 aaPredicted RBP18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 SERPINB12Q96P63 405 aa18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 VAT1Q99536 393 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms