RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 CNBD2Q96M20 576 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 CATSPER2Q96P56 530 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 SH3GL2Q99962 352 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 VANGL2Q9ULK5 521 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 GRIN2DO15399 1336 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 TTLL13PA6NNM8 815 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 PAPSS1O43252 624 aaPredicted RBP4.93□□□□□ -1.62
UBR1-201ENST00000290650 LIASO43766 372 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 LUC7L3O95232 432 aaKnown RBP4.93□□□□□ -1.62
UBR1-201ENST00000290650 PAPOLAP51003 745 aaKnown RBP4.93□□□□□ -1.62
UBR1-201ENST00000290650 TMED1Q13445 227 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 BIRC2Q13490 618 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 LBRQ14739 615 aaKnown RBP4.93□□□□□ -1.62
UBR1-201ENST00000290650 POM121L1PQ3SYA9 428 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 GALNTL6Q49A17 601 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 PTPN20Q4JDL3 420 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 FBXO48Q5FWF7 155 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 N4BP2L1Q5TBK1 243 aaPredicted RBP4.93□□□□□ -1.62
UBR1-201ENST00000290650 DUPD1Q68J44 220 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 GLB1LQ6UWU2 654 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 SUGP1Q8IWZ8 645 aaKnown RBP4.93□□□□□ -1.62
UBR1-201ENST00000290650 IQCKQ8N0W5 287 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 OR52K1Q8NGK4 314 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 CXorf38Q8TB03 319 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 SGSM3Q96HU1 749 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 MROH8Q9H579 483 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 FBXO6Q9NRD1 293 aaPredicted RBP4.93□□□□□ -1.62
UBR1-201ENST00000290650 GEMIN8Q9NWZ8 242 aaKnown RBP4.93□□□□□ -1.62
UBR1-201ENST00000290650 UBQLN1Q9UMX0 589 aaKnown RBP4.93□□□□□ -1.62
UBR1-201ENST00000290650 SLC27A5Q9Y2P5 690 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 BTAF1O14981 1849 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 ERI2A8K979 691 aaKnown RBP4.93□□□□□ -1.62
UBR1-201ENST00000290650 GPR25O00155 361 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 AGRPO00253 132 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 PARNO95453 639 aaKnown RBP4.93□□□□□ -1.62
UBR1-201ENST00000290650 RPL22P35268 128 aaKnown RBP4.93□□□□□ -1.62
UBR1-201ENST00000290650 CNGA2Q16280 664 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 HS6ST3Q8IZP7 471 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 ULBP1Q9BZM6 244 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 CCDC90BQ9GZT6 254 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 TKTL2Q9H0I9 626 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 WWP1Q9H0M0 922 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 ZFYVE28Q9HCC9 887 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 TMPRSS4Q9NRS4 437 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 SLC17A7Q9P2U7 560 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 PCDHB7Q9Y5E2 793 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 STRCP1A6NGW2 1772 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 ZMYM2Q9UBW7 1377 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 OR4Q2P0C623 313 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 ZACNQ401N2 412 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 MAP3K21Q5TCX8 1036 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 ANKRD22Q5VYY1 191 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 C11orf74Q86VG3 221 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 ZNF75CPQ92670 426 aaPredicted RBP4.93□□□□□ -1.62
UBR1-201ENST00000290650 EXOC2Q96KP1 924 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 TBCBQ99426 244 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 SNRNP25Q9BV90 132 aaKnown RBP4.93□□□□□ -1.62
UBR1-201ENST00000290650 CAB39LQ9H9S4 337 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 ADAMTSL3P82987 1691 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 RNF103-CHMP3A0A140T963 221 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 SMNDC1O75940 238 aaKnown RBP eCLIP4.93□□□□□ -1.62
UBR1-201ENST00000290650 CHRM3P20309 590 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 HNRNPH3P31942 346 aaKnown RBP4.93□□□□□ -1.62
UBR1-201ENST00000290650 GAD2Q05329 585 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 TRIP10Q15642 601 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 SLC39A12Q504Y0 691 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 FSCBQ5H9T9 825 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 C6orf10Q5SRN2 563 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 ZSCAN18Q8TBC5 510 aaPredicted RBP4.93□□□□□ -1.62
UBR1-201ENST00000290650 NSL1Q96IY1 281 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 NDNQ99608 321 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 OMDQ99983 421 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 DLGAP2Q9P1A6 1054 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 SFMBT1Q9UHJ3 866 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 SOWAHBA6NEL2 793 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 CFAP73A6NFT4 308 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 PFDN6O15212 129 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 SUPT7LO94864 414 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 SMIM10L2AP0DMW4 78 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 SMIM10L2BP0DMW5 78 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 FGFR3P22607 806 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 NDUFV1P49821 464 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 UBAP2LQ14157 1087 aaKnown RBP4.93□□□□□ -1.62
UBR1-201ENST00000290650 BOLA3Q53S33 107 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 ALYREFQ86V81 257 aaKnown RBP4.93□□□□□ -1.62
UBR1-201ENST00000290650 LRRC57Q8N9N7 239 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 FBXO32Q969P5 355 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 ULK4Q96C45 1275 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 RHOBTB2Q9BYZ6 727 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 SHOC2Q9UQ13 582 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 ANKRD36CQ5JPF3 1778 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 NID2Q14112 1375 aa4.93□□□□□ -1.62
UBR1-201ENST00000290650 NCANO14594 1321 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 PKD1L3Q7Z443 1732 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 SDR42E2A6NKP2 422 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 TPP1O14773 563 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 TREHO43280 583 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 ARIH2O95376 493 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 ATP6V1G2O95670 118 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 GUCA1CO95843 209 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms