RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 ATG4AQ8WYN0 398 aa11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 TSPAN18Q96SJ8 248 aa11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 MMADHCQ9H3L0 296 aaPredicted RBP11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 PARVBQ9HBI1 364 aa11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 UBAP1Q9NZ09 502 aa11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 DNAJB2P25686 324 aa11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 RPS6KA3P51812 740 aa11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 EIF3EP60228 445 aaKnown RBP11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 SFSWAPQ12872 951 aaKnown RBP11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 TBCCQ15814 346 aa11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 GJB7Q6PEY0 223 aa11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 CLEC4FQ8N1N0 589 aa11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 TMC2Q8TDI7 906 aa11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 DHX38Q92620 1227 aaKnown RBP11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.73□□□□□ -0.533e-6■■■■□ 20.9
NPC1L1-201ENST00000289547 ZBED3Q96IU2 234 aaPredicted RBP11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 SGIP1Q9BQI5 828 aa11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 THAP2Q9H0W7 228 aa11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 ZNF212Q9UDV6 495 aa11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 ITGB1BP2Q9UKP3 347 aa11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 CASTOR2A6NHX0 329 aa11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 ARVCFO00192 962 aa11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 HNRNPRO43390 633 aaKnown RBP11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 UNC5CO95185 931 aa11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 FAM58BPP0C7Q3 252 aa11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 SSTR3P32745 418 aaPredicted RBP11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 B3GNT6Q6ZMB0 384 aa11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 ADGRF2Q8IZF7 708 aa11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 MTMR9Q96QG7 549 aa11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 ZSWIM1Q9BR11 485 aa11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 RNPEPQ9H4A4 650 aa11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 CYLDQ9NQC7 956 aa11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 ATXN10Q9UBB4 475 aa11.73□□□□□ -0.53
NPC1L1-201ENST00000289547 TRIM49D1C9J1S8 452 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 RIPK2O43353 540 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 LAG3P18627 525 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 RTP1P59025 263 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 TMEM119Q4V9L6 283 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 NOMO2Q5JPE7 1267 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 FBXO47Q5MNV8 452 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 DNAAF5Q86Y56 855 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 TMPRSS6Q8IU80 811 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 MICU2Q8IYU8 434 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 COQ7Q99807 217 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 DYRK4Q9NR20 520 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 TAGLN3Q9UI15 199 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 COMMD3-BMI1R4GMX3 469 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 CNTNAP2Q9UHC6 1331 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 EML1O00423 815 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 PSMG1O95456 288 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 HMOX2P30519 316 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 CD52P31358 61 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 QPCTQ16769 361 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 ANO4Q32M45 955 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 FAM102AQ5T9C2 384 aaPredicted RBP11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 LRRC8BQ6P9F7 803 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 CCDC149Q6ZUS6 474 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 ZFYVE19Q96K21 471 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 TBC1D10AQ9BXI6 508 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 DDX56Q9NY93 547 aaKnown RBP11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 XPO7Q9UIA9 1087 aaKnown RBP11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 ST3GAL5Q9UNP4 418 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 BNIP3LO60238 219 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 APRTP07741 180 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 CLK1P49759 484 aaKnown RBP11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 INAQ16352 499 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 PPM1LQ5SGD2 360 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 FAM171A1Q5VUB5 890 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 CENPTQ96BT3 561 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 KLHL8Q9P2G9 620 aaPredicted RBP11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 TEKT2Q9UIF3 430 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 SOX11P35716 441 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 SARSP49591 514 aaKnown RBP11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 FASTKD1Q53R41 847 aaKnown RBP11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 WLSQ5T9L3 541 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 ABHD15Q6UXT9 468 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 MAGEC3Q8TD91 643 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 GDPD5Q8WTR4 605 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 CNDP1Q96KN2 507 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 RAB6BQ9NRW1 208 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 KBTBD4Q9NVX7 518 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 TRPM5Q9NZQ8 1165 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 ZMYND8Q9ULU4 1186 aaPredicted RBP11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 GIT1Q9Y2X7 761 aa11.72□□□□□ -0.53
NPC1L1-201ENST00000289547 AQP5P55064 265 aa11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 PTENP60484 403 aa11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 MCL1Q07820 350 aa11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 HSDL1Q3SXM5 330 aa11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 OVOS1Q6IE37 1185 aa11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 LAYNQ6UX15 382 aa11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 TRIM74Q86UV6 250 aa11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 TRIM73Q86UV7 250 aa11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 FBXO22Q8NEZ5 403 aa11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 CYP3A43Q9HB55 503 aa11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 PCDHB2Q9Y5E7 798 aa11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 PCDHA2Q9Y5H9 948 aa11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 C1orf232A0A0U1RR37 186 aa11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 ZNF839A8K0R7 811 aa11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 FCHO1O14526 889 aa11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 ZBTB39O15060 712 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms