RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 PLK2Q9NYY3 685 aa21.41■■□□□ 1.02
RAB28-201ENST00000288723 LIMA1Q9UHB6 759 aaKnown RBP21.41■■□□□ 1.02
RAB28-201ENST00000288723 FRYLO94915 3013 aa21.4■■□□□ 1.02
RAB28-201ENST00000288723 FAM170AA1A519 330 aa21.4■■□□□ 1.02
RAB28-201ENST00000288723 PRR23AA6NEV1 266 aa21.4■■□□□ 1.02
RAB28-201ENST00000288723 PAPSS1O43252 624 aaPredicted RBP21.4■■□□□ 1.02
RAB28-201ENST00000288723 FYNP06241 537 aa21.4■■□□□ 1.02
RAB28-201ENST00000288723 TYRP14679 529 aa21.4■■□□□ 1.02
RAB28-201ENST00000288723 ZNF18P17022 549 aa21.4■■□□□ 1.02
RAB28-201ENST00000288723 ACADSBP45954 432 aa21.4■■□□□ 1.02
RAB28-201ENST00000288723 PXNP49023 591 aaPredicted RBP21.4■■□□□ 1.02
RAB28-201ENST00000288723 PDCLQ13371 301 aa21.4■■□□□ 1.02
RAB28-201ENST00000288723 MEA1Q16626 185 aa21.4■■□□□ 1.02
RAB28-201ENST00000288723 EMC10Q5UCC4 262 aa21.4■■□□□ 1.02
RAB28-201ENST00000288723 GOLGA1Q92805 767 aa21.4■■□□□ 1.02
RAB28-201ENST00000288723 FAM149B1Q96BN6 582 aa21.4■■□□□ 1.02
RAB28-201ENST00000288723 FAM207AQ9NSI2 230 aaPredicted RBP21.4■■□□□ 1.02
RAB28-201ENST00000288723 PCDHGA2Q9Y5H1 932 aa21.4■■□□□ 1.02
RAB28-201ENST00000288723 CHURC1-FNTBB4DL54 471 aa21.39■■□□□ 1.02
RAB28-201ENST00000288723 ATG13O75143 517 aa21.39■■□□□ 1.02
RAB28-201ENST00000288723 APODP05090 189 aa21.39■■□□□ 1.02
RAB28-201ENST00000288723 ATP1A3P13637 1013 aa21.39■■□□□ 1.02
RAB28-201ENST00000288723 KRT9P35527 623 aa21.39■■□□□ 1.02
RAB28-201ENST00000288723 EIF2DP41214 584 aaKnown RBP21.39■■□□□ 1.02
RAB28-201ENST00000288723 FNTBP49356 437 aa21.39■■□□□ 1.02
RAB28-201ENST00000288723 FKBP15Q5T1M5 1219 aa21.39■■□□□ 1.02
RAB28-201ENST00000288723 TMEM110Q86TL2 294 aa21.39■■□□□ 1.02
RAB28-201ENST00000288723 PHTF2Q8N3S3 785 aa21.39■■□□□ 1.02
RAB28-201ENST00000288723 DCLK3Q9C098 648 aa21.39■■□□□ 1.02
RAB28-201ENST00000288723 GANQ9H2C0 597 aa21.39■■□□□ 1.02
RAB28-201ENST00000288723 ZDHHC4Q9NPG8 344 aa21.39■■□□□ 1.02
RAB28-201ENST00000288723 DEC1Q9P2X7 70 aa21.39■■□□□ 1.02
RAB28-201ENST00000288723 PCDHGC3Q9UN70 934 aa21.39■■□□□ 1.02
RAB28-201ENST00000288723 NAALADL1Q9UQQ1 740 aa21.39■■□□□ 1.02
RAB28-201ENST00000288723 EPHB6O15197 1021 aa21.39■■□□□ 1.01
RAB28-201ENST00000288723 PAPSS2O95340 614 aaPredicted RBP21.39■■□□□ 1.01
RAB28-201ENST00000288723 NCAM1P13591 858 aa21.39■■□□□ 1.01
RAB28-201ENST00000288723 GRIA2P42262 883 aa21.39■■□□□ 1.01
RAB28-201ENST00000288723 TRIP4Q15650 581 aaPredicted RBP21.39■■□□□ 1.01
RAB28-201ENST00000288723 C1orf131Q8NDD1 294 aaKnown RBP21.39■■□□□ 1.01
RAB28-201ENST00000288723 ANKRD20A12PQ8NF67 263 aa21.39■■□□□ 1.01
RAB28-201ENST00000288723 USP33Q8TEY7 942 aa21.39■■□□□ 1.01
RAB28-201ENST00000288723 PLD4Q96BZ4 506 aa21.39■■□□□ 1.01
RAB28-201ENST00000288723 PIWIL1Q96J94 861 aaKnown RBP21.39■■□□□ 1.01
RAB28-201ENST00000288723 CPXM1Q96SM3 734 aa21.39■■□□□ 1.01
RAB28-201ENST00000288723 DNAJC17Q9NVM6 304 aaKnown RBP21.39■■□□□ 1.01
RAB28-201ENST00000288723 SLC8A2Q9UPR5 921 aa21.39■■□□□ 1.01
RAB28-201ENST00000288723 ZNF510Q9Y2H8 683 aa21.39■■□□□ 1.01
RAB28-201ENST00000288723 TBC1D3BA6NDS4 549 aa21.38■■□□□ 1.01
RAB28-201ENST00000288723 NRLP54845 237 aa21.38■■□□□ 1.01
RAB28-201ENST00000288723 TAF5Q15542 800 aa21.38■■□□□ 1.01
RAB28-201ENST00000288723 CCDC33Q8N5R6 958 aa21.38■■□□□ 1.01
RAB28-201ENST00000288723 FAM126AQ9BYI3 521 aaPredicted RBP21.38■■□□□ 1.01
RAB28-201ENST00000288723 STK33Q9BYT3 514 aa21.38■■□□□ 1.01
RAB28-201ENST00000288723 NAT10Q9H0A0 1025 aaKnown RBP21.38■■□□□ 1.01
RAB28-201ENST00000288723 MARK1Q9P0L2 795 aa21.38■■□□□ 1.01
RAB28-201ENST00000288723 WDR35Q9P2L0 1181 aa21.38■■□□□ 1.01
RAB28-201ENST00000288723 HBS1LQ9Y450 684 aaKnown RBP21.38■■□□□ 1.01
RAB28-201ENST00000288723 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.37■■□□□ 1.01
RAB28-201ENST00000288723 F8VZ95 297 aa21.37■■□□□ 1.01
RAB28-201ENST00000288723 CYP11B1P15538 503 aa21.37■■□□□ 1.01
RAB28-201ENST00000288723 TIE1P35590 1138 aa21.37■■□□□ 1.01
RAB28-201ENST00000288723 HARS2P49590 506 aaKnown RBP21.37■■□□□ 1.01
RAB28-201ENST00000288723 POLR2FP61218 127 aaKnown RBP21.37■■□□□ 1.01
RAB28-201ENST00000288723 SYCP1Q15431 976 aa21.37■■□□□ 1.01
RAB28-201ENST00000288723 KLHL40Q2TBA0 621 aa21.37■■□□□ 1.01
RAB28-201ENST00000288723 TAF3Q5VWG9 929 aa21.37■■□□□ 1.01
RAB28-201ENST00000288723 SYPL2Q5VXT5 272 aa21.37■■□□□ 1.01
RAB28-201ENST00000288723 MSANTD2Q6P1R3 559 aa21.37■■□□□ 1.01
RAB28-201ENST00000288723 APTXQ7Z2E3 356 aaKnown RBP21.37■■□□□ 1.01
RAB28-201ENST00000288723 DHX40Q8IX18 779 aaKnown RBP21.37■■□□□ 1.01
RAB28-201ENST00000288723 ADAM32Q8TC27 787 aa21.37■■□□□ 1.01
RAB28-201ENST00000288723 PPP1R13BQ96KQ4 1090 aa21.37■■□□□ 1.01
RAB28-201ENST00000288723 LHX5Q9H2C1 402 aa21.37■■□□□ 1.01
RAB28-201ENST00000288723 NLRC4Q9NPP4 1024 aa21.37■■□□□ 1.01
RAB28-201ENST00000288723 SIK3Q9Y2K2 1263 aa21.37■■□□□ 1.01
RAB28-201ENST00000288723 A0A0A0MRY4 1105 aa21.36■■□□□ 1.01
RAB28-201ENST00000288723 SYCE3A1L190 88 aa21.36■■□□□ 1.01
RAB28-201ENST00000288723 LRRC10BA6NIK2 292 aa21.36■■□□□ 1.01
RAB28-201ENST00000288723 LGALS16A8MUM7 142 aa21.36■■□□□ 1.01
RAB28-201ENST00000288723 CACNG3O60359 315 aa21.36■■□□□ 1.01
RAB28-201ENST00000288723 LILRB5O75023 590 aa21.36■■□□□ 1.01
RAB28-201ENST00000288723 LMNAP02545 664 aaKnown RBP21.36■■□□□ 1.01
RAB28-201ENST00000288723 CHKAP35790 457 aa21.36■■□□□ 1.01
RAB28-201ENST00000288723 BPIFB4P59827 614 aa21.36■■□□□ 1.01
RAB28-201ENST00000288723 UBXN1Q04323 297 aa21.36■■□□□ 1.01
RAB28-201ENST00000288723 SRSF5Q13243 272 aaKnown RBP21.36■■□□□ 1.01
RAB28-201ENST00000288723 TOGARAM2Q6ZUX3 1019 aa21.36■■□□□ 1.01
RAB28-201ENST00000288723 PCMTD1Q96MG8 357 aaPredicted RBP21.36■■□□□ 1.01
RAB28-201ENST00000288723 XPO6Q96QU8 1125 aaKnown RBP21.36■■□□□ 1.01
RAB28-201ENST00000288723 HHIPQ96QV1 700 aa21.36■■□□□ 1.01
RAB28-201ENST00000288723 FANCMQ8IYD8 2048 aa21.36■■□□□ 1.01
RAB28-201ENST00000288723 SART1O43290 800 aaKnown RBP21.36■■□□□ 1.01
RAB28-201ENST00000288723 DMC1Q14565 340 aa21.36■■□□□ 1.01
RAB28-201ENST00000288723 SYT13Q7L8C5 426 aa21.36■■□□□ 1.01
RAB28-201ENST00000288723 ALLCQ8N6M5 410 aa21.36■■□□□ 1.01
RAB28-201ENST00000288723 DQX1Q8TE96 717 aaKnown RBP21.36■■□□□ 1.01
RAB28-201ENST00000288723 FUCA2Q9BTY2 467 aa21.36■■□□□ 1.01
RAB28-201ENST00000288723 PDCL3Q9H2J4 239 aa21.36■■□□□ 1.01
RAB28-201ENST00000288723 SEMA4AQ9H3S1 761 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms