RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 UROC1Q96N76 676 aa19.06■□□□□ 0.64
PCDH1-201ENST00000287008 RIC1Q4ADV7 1423 aa19.06■□□□□ 0.64
PCDH1-201ENST00000287008 PHF20L1A8MW92 1017 aa19.06■□□□□ 0.64
PCDH1-201ENST00000287008 KPNA3O00505 521 aaPredicted RBP19.06■□□□□ 0.64
PCDH1-201ENST00000287008 YBX3P16989 372 aaKnown RBP eCLIP19.06■□□□□ 0.64
PCDH1-201ENST00000287008 CDH17Q12864 832 aa19.06■□□□□ 0.64
PCDH1-201ENST00000287008 NT5DC3Q86UY8 548 aa19.06■□□□□ 0.64
PCDH1-201ENST00000287008 ELMO3Q96BJ8 720 aa19.06■□□□□ 0.64
PCDH1-201ENST00000287008 ERP27Q96DN0 273 aa19.06■□□□□ 0.64
PCDH1-201ENST00000287008 ZCCHC2Q9C0B9 1178 aaKnown RBP19.06■□□□□ 0.64
PCDH1-201ENST00000287008 CDT1Q9H211 546 aa19.06■□□□□ 0.64
PCDH1-201ENST00000287008 DCDC2Q9UHG0 476 aa19.06■□□□□ 0.64
PCDH1-201ENST00000287008 E5RJQ4 531 aa19.06■□□□□ 0.64
PCDH1-201ENST00000287008 MAP3K10Q02779 954 aa19.06■□□□□ 0.64
PCDH1-201ENST00000287008 WDR59Q6PJI9 974 aa19.06■□□□□ 0.64
PCDH1-201ENST00000287008 STRA8Q7Z7C7 330 aa19.06■□□□□ 0.64
PCDH1-201ENST00000287008 HES6Q96HZ4 224 aa19.06■□□□□ 0.64
PCDH1-201ENST00000287008 PCDH9Q9HC56 1237 aa19.06■□□□□ 0.64
PCDH1-201ENST00000287008 AVENQ9NQS1 362 aaPredicted RBP19.06■□□□□ 0.64
PCDH1-201ENST00000287008 RNF19AQ9NV58 838 aa19.06■□□□□ 0.64
PCDH1-201ENST00000287008 FBXL21Q9UKT6 434 aa19.06■□□□□ 0.64
PCDH1-201ENST00000287008 VANGL2Q9ULK5 521 aa19.06■□□□□ 0.64
PCDH1-201ENST00000287008 PNMA8BQ9ULN7 279 aaPredicted RBP19.06■□□□□ 0.64
PCDH1-201ENST00000287008 DTNAQ9Y4J8 743 aa19.06■□□□□ 0.64
PCDH1-201ENST00000287008 LOC100653049A0A140TA62 436 aa19.06■□□□□ 0.64
PCDH1-201ENST00000287008 ATP9AO75110 1047 aa19.06■□□□□ 0.64
PCDH1-201ENST00000287008 KRT34O76011 436 aa19.06■□□□□ 0.64
PCDH1-201ENST00000287008 IGSF6O95976 241 aa19.06■□□□□ 0.64
PCDH1-201ENST00000287008 USP17L7P0C7H9 530 aa19.06■□□□□ 0.64
PCDH1-201ENST00000287008 GTF2BQ00403 316 aa19.06■□□□□ 0.64
PCDH1-201ENST00000287008 ACAP1Q15027 740 aa19.06■□□□□ 0.64
PCDH1-201ENST00000287008 GPAMQ9HCL2 828 aa19.06■□□□□ 0.64
PCDH1-201ENST00000287008 TISP43B9A030 160 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 O00370 1275 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 RBP1P09455 135 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 AMPD1P23109 780 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 CTNNB1P35222 781 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 LENG9Q96B70 501 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 ABCC13Q9NSE7 274 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 ARHGAP26Q9UNA1 814 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 EIF3LQ9Y262 564 aaKnown RBP19.05■□□□□ 0.64
PCDH1-201ENST00000287008 CCDC130P13994 396 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 PAX3P23760 479 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 CRYBB1P53674 252 aaPredicted RBP19.05■□□□□ 0.64
PCDH1-201ENST00000287008 MED21Q13503 144 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 AASDHQ4L235 1098 aaPredicted RBP19.05■□□□□ 0.64
PCDH1-201ENST00000287008 CACHD1Q5VU97 1274 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 C16orf89Q6UX73 402 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 NKX2-3Q8TAU0 364 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 ABHD8Q96I13 439 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 NFKBIZQ9BYH8 718 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 ZNF556Q9HAH1 456 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 MAGEB16A2A368 324 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 KCNK1O00180 336 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 HSD17B3P37058 310 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 DMTNQ08495 405 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 MGAT5Q09328 741 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 POU6F1Q14863 301 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 DUSP28Q4G0W2 176 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 NT5DC1Q5TFE4 455 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 C3orf20Q8ND61 904 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 TMEM161BQ8NDZ6 487 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 NUDT5Q9UKK9 219 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 TRHDEQ9UKU6 1024 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 ST3GAL5Q9UNP4 418 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 DYRK1BQ9Y463 629 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 PTENP60484 403 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 CAPSQ13938 189 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 MFSD4BQ5TF39 518 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 SLC26A11Q86WA9 606 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 CATSPER1Q8NEC5 780 aa19.05■□□□□ 0.64
PCDH1-201ENST00000287008 RUVBL2Q9Y230 463 aaKnown RBP19.05■□□□□ 0.64
PCDH1-201ENST00000287008 MROH2AA6NES4 1674 aa19.04■□□□□ 0.64
PCDH1-201ENST00000287008 A0A087X0B3 334 aa19.04■□□□□ 0.64
PCDH1-201ENST00000287008 CAND2O75155 1236 aa19.04■□□□□ 0.64
PCDH1-201ENST00000287008 CD52P31358 61 aa19.04■□□□□ 0.64
PCDH1-201ENST00000287008 PPM1AP35813 382 aa19.04■□□□□ 0.64
PCDH1-201ENST00000287008 ATXN3P54252 364 aaPredicted RBP19.04■□□□□ 0.64
PCDH1-201ENST00000287008 NCKAP1LP55160 1127 aa19.04■□□□□ 0.64
PCDH1-201ENST00000287008 BTKQ06187 659 aa19.04■□□□□ 0.64
PCDH1-201ENST00000287008 POTEAQ6S8J7 498 aa19.04■□□□□ 0.64
PCDH1-201ENST00000287008 NLRP9Q7RTR0 991 aa19.04■□□□□ 0.64
PCDH1-201ENST00000287008 PTAR1Q7Z6K3 402 aaPredicted RBP19.04■□□□□ 0.64
PCDH1-201ENST00000287008 SUSD6Q92537 303 aa19.04■□□□□ 0.64
PCDH1-201ENST00000287008 JADE3Q92613 823 aa19.04■□□□□ 0.64
PCDH1-201ENST00000287008 SKA1Q96BD8 255 aa19.04■□□□□ 0.64
PCDH1-201ENST00000287008 PLEKHA8Q96JA3 519 aa19.04■□□□□ 0.64
PCDH1-201ENST00000287008 FAR2Q96K12 515 aa19.04■□□□□ 0.64
PCDH1-201ENST00000287008 MAGEA9P43362 315 aa19.04■□□□□ 0.64
PCDH1-201ENST00000287008 FAM9CQ8IZT9 166 aa19.04■□□□□ 0.64
PCDH1-201ENST00000287008 HSFY1Q96LI6 401 aa19.04■□□□□ 0.64
PCDH1-201ENST00000287008 EIF2AQ9BY44 585 aaKnown RBP19.04■□□□□ 0.64
PCDH1-201ENST00000287008 PRKD2Q9BZL6 878 aa19.04■□□□□ 0.64
PCDH1-201ENST00000287008 SKAP2O75563 359 aaPredicted RBP19.04■□□□□ 0.64
PCDH1-201ENST00000287008 NOS2P35228 1153 aa19.04■□□□□ 0.64
PCDH1-201ENST00000287008 ERFP50548 548 aa19.04■□□□□ 0.64
PCDH1-201ENST00000287008 CNGA2Q16280 664 aa19.04■□□□□ 0.64
PCDH1-201ENST00000287008 CBWD6Q4V339 395 aa19.04■□□□□ 0.64
PCDH1-201ENST00000287008 CBWD3Q5JTY5 395 aa19.04■□□□□ 0.64
PCDH1-201ENST00000287008 CBWD5Q5RIA9 395 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms