RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 ADORA2BP29275 332 aa13.84□□□□□ -0.19
SCAF4-201ENST00000286835 PDCD2Q16342 344 aaPredicted RBP13.84□□□□□ -0.19
SCAF4-201ENST00000286835 AMHR2Q16671 573 aa13.84□□□□□ -0.19
SCAF4-201ENST00000286835 DLK2Q6UY11 383 aa13.84□□□□□ -0.19
SCAF4-201ENST00000286835 NET1Q7Z628 596 aaPredicted RBP13.84□□□□□ -0.19
SCAF4-201ENST00000286835 UNC5BQ8IZJ1 945 aa13.84□□□□□ -0.19
SCAF4-201ENST00000286835 FAM172AQ8WUF8 416 aa13.84□□□□□ -0.19
SCAF4-201ENST00000286835 CMTM5Q96DZ9 223 aa13.84□□□□□ -0.19
SCAF4-201ENST00000286835 PANX3Q96QZ0 392 aa13.84□□□□□ -0.19
SCAF4-201ENST00000286835 NDNQ99608 321 aa13.84□□□□□ -0.19
SCAF4-201ENST00000286835 PLLPQ9Y342 182 aa13.84□□□□□ -0.19
SCAF4-201ENST00000286835 TM7SF2O76062 418 aa13.83□□□□□ -0.19
SCAF4-201ENST00000286835 IFRD2Q12894 506 aaPredicted RBP13.83□□□□□ -0.19
SCAF4-201ENST00000286835 TAF1CQ15572 869 aaPredicted RBP13.83□□□□□ -0.19
SCAF4-201ENST00000286835 FSCBQ5H9T9 825 aa13.83□□□□□ -0.19
SCAF4-201ENST00000286835 IL31Q6EBC2 164 aa13.83□□□□□ -0.19
SCAF4-201ENST00000286835 KRT80Q6KB66 452 aa13.83□□□□□ -0.19
SCAF4-201ENST00000286835 GPRASP2Q96D09 838 aa13.83□□□□□ -0.19
SCAF4-201ENST00000286835 THAP1Q9NVV9 213 aa13.83□□□□□ -0.19
SCAF4-201ENST00000286835 RPL26L1Q9UNX3 145 aaKnown RBP13.83□□□□□ -0.19
SCAF4-201ENST00000286835 SIGLEC16A6NMB1 481 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 XPO1O14980 1071 aaKnown RBP13.83□□□□□ -0.2
SCAF4-201ENST00000286835 OGTO15294 1046 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 PEX10O60683 326 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 FKBP6O75344 327 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 EGFRP00533 1210 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 PEX2P28328 305 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 ABCD1P33897 745 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 CCNFP41002 786 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 ZNF252P-AS1Q0IIN9 211 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 USP4Q13107 963 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 PID1Q7Z2X4 250 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 VSIG10LQ86VR7 867 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 TNS4Q8IZW8 715 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 PIWIL2Q8TC59 973 aaKnown RBP13.83□□□□□ -0.2
SCAF4-201ENST00000286835 KLHL8Q9P2G9 620 aaPredicted RBP13.83□□□□□ -0.2
SCAF4-201ENST00000286835 PLA2G4CQ9UP65 541 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 STRCQ7RTU9 1775 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 ASS1P00966 412 aaKnown RBP13.83□□□□□ -0.2
SCAF4-201ENST00000286835 EIF4BP23588 611 aaKnown RBP13.83□□□□□ -0.2
SCAF4-201ENST00000286835 PKNOX1P55347 436 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 PTPN11Q06124 597 aaPredicted RBP13.83□□□□□ -0.2
SCAF4-201ENST00000286835 TTLL4Q14679 1199 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 HSP90AA5PQ58FG0 334 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 DHDDSQ86SQ9 333 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 SCUBE3Q8IX30 993 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 TMEM130Q8N3G9 435 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 OPTNQ96CV9 577 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 WNK4Q96J92 1243 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 FBXL18Q96ME1 805 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 TRAPPC9Q96Q05 1148 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 ARHGAP28Q9P2N2 729 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 MRPS22P82650 360 aaKnown RBP13.83□□□□□ -0.2
SCAF4-201ENST00000286835 MARK2Q7KZI7 788 aaKnown RBP13.83□□□□□ -0.2
SCAF4-201ENST00000286835 ERO1BQ86YB8 467 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 APLFQ8IW19 511 aaPredicted RBP13.83□□□□□ -0.2
SCAF4-201ENST00000286835 KBTBD2Q8IY47 623 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 SERPINI1Q99574 410 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 APOL2Q9BQE5 337 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 ZNF518BQ9C0D4 1074 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 GRIP2Q9C0E4 1043 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 KANSL3Q9P2N6 904 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 TLK1Q9UKI8 766 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 NUMBLQ9Y6R0 609 aa13.83□□□□□ -0.2
SCAF4-201ENST00000286835 CAPN8A6NHC0 703 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 PMM2O15305 246 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 PEX1O43933 1283 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 USP12O75317 370 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 ERBB2P04626 1255 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 SOX11P35716 441 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 MLH1P40692 756 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 GLRBP48167 497 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 GTF2A2P52657 109 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 CNTN2Q02246 1040 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 FLOT2Q14254 428 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 SURF1Q15526 300 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 RELL1Q8IUW5 271 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 CDKL3Q8IVW4 592 aaPredicted RBP13.82□□□□□ -0.2
SCAF4-201ENST00000286835 PTCD3Q96EY7 689 aaKnown RBP13.82□□□□□ -0.2
SCAF4-201ENST00000286835 ETNK2Q9NVF9 386 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 HBS1LQ9Y450 684 aaKnown RBP13.82□□□□□ -0.2
SCAF4-201ENST00000286835 ZNF536O15090 1300 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 GOLGA8TH3BQL2 631 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 ABLIM1O14639 778 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 MICAL2O94851 1124 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 CLPTM1O96005 669 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 CSH1P0DML2 217 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 CSH2P0DML3 217 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 RALBP11234 206 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 RPS6KA3P51812 740 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 AQP4P55087 323 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 YWHAZP63104 245 aaKnown RBP13.82□□□□□ -0.2
SCAF4-201ENST00000286835 LIN52Q52LA3 116 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 RARS2Q5T160 578 aaKnown RBP13.82□□□□□ -0.2
SCAF4-201ENST00000286835 ATF7IP2Q5U623 682 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 FKBP1CQ5VVH2 108 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 TAS1R3Q7RTX0 852 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 WDR49Q8IV35 697 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 BRSK2Q8IWQ3 736 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 SKA1Q96BD8 255 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms