RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 INO80B-WBP1J3KQ70 363 aa13.4□□□□□ -0.26
C9orf3-201ENST00000277198 NOP56O00567 594 aaKnown RBP13.4□□□□□ -0.26
C9orf3-201ENST00000277198 HGSO14964 777 aaPredicted RBP13.4□□□□□ -0.26
C9orf3-201ENST00000277198 HBP1O60381 514 aa13.4□□□□□ -0.26
C9orf3-201ENST00000277198 KRT19P08727 400 aa13.4□□□□□ -0.26
C9orf3-201ENST00000277198 MCF2P10911 925 aa13.4□□□□□ -0.26
C9orf3-201ENST00000277198 CSF2RAP15509 400 aa13.4□□□□□ -0.26
C9orf3-201ENST00000277198 GPD1P21695 349 aa13.4□□□□□ -0.26
C9orf3-201ENST00000277198 TGM2P21980 687 aa13.4□□□□□ -0.26
C9orf3-201ENST00000277198 ELK3P41970 407 aa13.4□□□□□ -0.26
C9orf3-201ENST00000277198 CCL23P55773 120 aa13.4□□□□□ -0.26
C9orf3-201ENST00000277198 MBTD1Q05BQ5 628 aa13.4□□□□□ -0.26
C9orf3-201ENST00000277198 LAMC2Q13753 1193 aa13.4□□□□□ -0.26
C9orf3-201ENST00000277198 KRT72Q14CN4 511 aa13.4□□□□□ -0.26
C9orf3-201ENST00000277198 PRKD1Q15139 912 aaPredicted RBP13.4□□□□□ -0.26
C9orf3-201ENST00000277198 PLEKHG4Q58EX7 1191 aa13.4□□□□□ -0.26
C9orf3-201ENST00000277198 DARS2Q6PI48 645 aaKnown RBP13.4□□□□□ -0.26
C9orf3-201ENST00000277198 MTDHQ86UE4 582 aaKnown RBP13.4□□□□□ -0.26
C9orf3-201ENST00000277198 LONP2Q86WA8 852 aa13.4□□□□□ -0.26
C9orf3-201ENST00000277198 SLC26A11Q86WA9 606 aa13.4□□□□□ -0.26
C9orf3-201ENST00000277198 TEX9Q8N6V9 391 aa13.4□□□□□ -0.26
C9orf3-201ENST00000277198 EMC1Q8N766 993 aa13.4□□□□□ -0.26
C9orf3-201ENST00000277198 TEKT4Q8WW24 435 aa13.4□□□□□ -0.26
C9orf3-201ENST00000277198 TBCBQ99426 244 aa13.4□□□□□ -0.26
C9orf3-201ENST00000277198 CALN1Q9BXU9 219 aa13.4□□□□□ -0.26
C9orf3-201ENST00000277198 INO80BQ9C086 356 aaPredicted RBP13.4□□□□□ -0.26
C9orf3-201ENST00000277198 SMARCAD1Q9H4L7 1026 aa13.4□□□□□ -0.26
C9orf3-201ENST00000277198 MKS1Q9NXB0 559 aa13.4□□□□□ -0.26
C9orf3-201ENST00000277198 TJP2Q9UDY2 1190 aa13.4□□□□□ -0.26
C9orf3-201ENST00000277198 PCSK1NQ9UHG2 260 aa13.4□□□□□ -0.26
C9orf3-201ENST00000277198 COL6A3P12111 3177 aa13.4□□□□□ -0.26
C9orf3-201ENST00000277198 C2CD4BA6NLJ0 364 aa13.4□□□□□ -0.27
C9orf3-201ENST00000277198 DPYSL4O14531 572 aa13.4□□□□□ -0.27
C9orf3-201ENST00000277198 PEX11AO75192 247 aa13.4□□□□□ -0.27
C9orf3-201ENST00000277198 KRT37O76014 449 aa13.4□□□□□ -0.27
C9orf3-201ENST00000277198 TIMP1P01033 207 aa13.4□□□□□ -0.27
C9orf3-201ENST00000277198 ATP5BP06576 529 aaKnown RBP13.4□□□□□ -0.27
C9orf3-201ENST00000277198 ACRP10323 421 aa13.4□□□□□ -0.27
C9orf3-201ENST00000277198 IBSPP21815 317 aaPredicted RBP13.4□□□□□ -0.27
C9orf3-201ENST00000277198 ARFIP2P53365 341 aa13.4□□□□□ -0.27
C9orf3-201ENST00000277198 CDK18Q07002 472 aa13.4□□□□□ -0.27
C9orf3-201ENST00000277198 INCA1Q0VD86 236 aa13.4□□□□□ -0.27
C9orf3-201ENST00000277198 DGKDQ16760 1214 aa13.4□□□□□ -0.27
C9orf3-201ENST00000277198 TTC39BQ5VTQ0 682 aaPredicted RBP13.4□□□□□ -0.27
C9orf3-201ENST00000277198 C16orf59Q7L2K0 433 aa13.4□□□□□ -0.27
C9orf3-201ENST00000277198 NT5DC4Q86YG4 428 aa13.4□□□□□ -0.27
C9orf3-201ENST00000277198 IFNLR1Q8IU57 520 aaPredicted RBP13.4□□□□□ -0.27
C9orf3-201ENST00000277198 LRRC71Q8N4P6 559 aa13.4□□□□□ -0.27
C9orf3-201ENST00000277198 CXorf38Q8TB03 319 aa13.4□□□□□ -0.27
C9orf3-201ENST00000277198 HSPH1Q92598 858 aa13.4□□□□□ -0.27
C9orf3-201ENST00000277198 ZNF570Q96NI8 536 aa13.4□□□□□ -0.27
C9orf3-201ENST00000277198 RNF157Q96PX1 679 aa13.4□□□□□ -0.27
C9orf3-201ENST00000277198 ELOVL4Q9GZR5 314 aa13.4□□□□□ -0.27
C9orf3-201ENST00000277198 MMADHCQ9H3L0 296 aaPredicted RBP13.4□□□□□ -0.27
C9orf3-201ENST00000277198 HIPK3Q9H422 1215 aa13.4□□□□□ -0.27
C9orf3-201ENST00000277198 DCLRE1BQ9H816 532 aa13.4□□□□□ -0.27
C9orf3-201ENST00000277198 CNTN3Q9P232 1028 aa13.4□□□□□ -0.27
C9orf3-201ENST00000277198 BCLAF3A2AJT9 711 aaKnown RBP13.39□□□□□ -0.27
C9orf3-201ENST00000277198 M0QYV0 167 aa13.39□□□□□ -0.27
C9orf3-201ENST00000277198 PRPSAP2O60256 369 aa13.39□□□□□ -0.27
C9orf3-201ENST00000277198 HAUS5O94927 633 aa13.39□□□□□ -0.27
C9orf3-201ENST00000277198 CBX6O95503 412 aa13.39□□□□□ -0.27
C9orf3-201ENST00000277198 F2P00734 622 aa13.39□□□□□ -0.27
C9orf3-201ENST00000277198 TPBGLP0DKB5 382 aa13.39□□□□□ -0.27
C9orf3-201ENST00000277198 CXCL8P10145 99 aa13.39□□□□□ -0.27
C9orf3-201ENST00000277198 HOXD8P13378 290 aaPredicted RBP13.39□□□□□ -0.27
C9orf3-201ENST00000277198 DESP17661 470 aa13.39□□□□□ -0.27
C9orf3-201ENST00000277198 CDH6P55285 790 aa13.39□□□□□ -0.27
C9orf3-201ENST00000277198 NAA25Q14CX7 972 aa13.39□□□□□ -0.27
C9orf3-201ENST00000277198 TMEM132AQ24JP5 1023 aa13.39□□□□□ -0.27
C9orf3-201ENST00000277198 KBTBD12Q3ZCT8 623 aa13.39□□□□□ -0.27
C9orf3-201ENST00000277198 FAM102AQ5T9C2 384 aaPredicted RBP13.39□□□□□ -0.27
C9orf3-201ENST00000277198 GDF6Q6KF10 455 aaPredicted RBP13.39□□□□□ -0.27
C9orf3-201ENST00000277198 ZNF449Q6P9G9 518 aa13.39□□□□□ -0.27
C9orf3-201ENST00000277198 LCLAT1Q6UWP7 414 aa13.39□□□□□ -0.27
C9orf3-201ENST00000277198 BZW1Q7L1Q6 419 aaKnown RBP13.39□□□□□ -0.27
C9orf3-201ENST00000277198 MCUQ8NE86 351 aa13.39□□□□□ -0.27
C9orf3-201ENST00000277198 RAB3IL1Q8TBN0 382 aa13.39□□□□□ -0.27
C9orf3-201ENST00000277198 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.39□□□□□ -0.27
C9orf3-201ENST00000277198 FAF2Q96CS3 445 aa13.39□□□□□ -0.27
C9orf3-201ENST00000277198 VWCEQ96DN2 955 aa13.39□□□□□ -0.27
C9orf3-201ENST00000277198 MTBPQ96DY7 904 aa13.39□□□□□ -0.27
C9orf3-201ENST00000277198 BTBD10Q9BSF8 475 aa13.39□□□□□ -0.27
C9orf3-201ENST00000277198 C16orf70Q9BSU1 422 aa13.39□□□□□ -0.27
C9orf3-201ENST00000277198 SDCBP2Q9H190 292 aa13.39□□□□□ -0.27
C9orf3-201ENST00000277198 C10orf88Q9H8K7 445 aa13.39□□□□□ -0.27
C9orf3-201ENST00000277198 USP29Q9HBJ7 922 aa13.39□□□□□ -0.27
C9orf3-201ENST00000277198 SLC17A7Q9P2U7 560 aa13.39□□□□□ -0.27
C9orf3-201ENST00000277198 BARX2Q9UMQ3 279 aaPredicted RBP13.39□□□□□ -0.27
C9orf3-201ENST00000277198 CHMP2BQ9UQN3 213 aa13.39□□□□□ -0.27
C9orf3-201ENST00000277198 EYSQ5T1H1 3165 aa13.39□□□□□ -0.27
C9orf3-201ENST00000277198 SNRPAP09012 282 aaKnown RBP13.38□□□□□ -0.27
C9orf3-201ENST00000277198 DLDP09622 509 aaKnown RBP13.38□□□□□ -0.27
C9orf3-201ENST00000277198 PRKCHP24723 683 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 GCKP35557 465 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 PHKA2P46019 1235 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 RAP1GAPP47736 663 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 PSEN2P49810 448 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 CDH8P55286 799 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 SNX16P57768 344 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms