RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 E7ESA3 106 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 F8W810 466 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 LTFP02788 710 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 GOT1P17174 413 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 BDNFP23560 247 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 ADRA1BP35368 520 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 ARL4AP40617 200 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 CDK7P50613 346 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 PRMT2P55345 433 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 PPARDQ03181 441 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 GBE1Q04446 702 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 DSC1Q08554 894 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 NME3Q13232 169 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 MSS51Q4VC12 460 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 NOMO2Q5JPE7 1267 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 CLLU1OSQ5K130 101 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 PM20D1Q6GTS8 502 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 FOXR1Q6PIV2 292 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 BHLHA9Q7RTU4 235 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 ZBED8Q8IZ13 594 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 OR10T2Q8NGX3 314 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 MDM1Q8TC05 714 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 IRGQQ8WZA9 623 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 PIGVQ9NUD9 493 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 ETNK2Q9NVF9 386 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 RRN3Q9NYV6 651 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 COX16Q9P0S2 106 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 LGALS13Q9UHV8 139 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 XPO7Q9UIA9 1087 aaKnown RBP9.95□□□□□ -0.82
TRIM55-201ENST00000276573 PCDHB8Q9UN66 801 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 TDRD15B5MCY1 1934 aaKnown RBP9.95□□□□□ -0.82
TRIM55-201ENST00000276573 H3BRJ5 948 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 B4GALT3O60512 393 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 DGKIO75912 1065 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 TMEM63AO94886 807 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 MAP3K6O95382 1288 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 ATP5DP30049 168 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 BASP1P80723 227 aaKnown RBP9.94□□□□□ -0.82
TRIM55-201ENST00000276573 CBLBQ13191 982 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 KCNJ11Q14654 390 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 MAPRE1Q15691 268 aaKnown RBP9.94□□□□□ -0.82
TRIM55-201ENST00000276573 SLC45A4Q5BKX6 768 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 NCBP2-AS2Q69YL0 99 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 C4orf22Q6V702 233 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 TAOK1Q7L7X3 1001 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 ANKMY2Q8IV38 441 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 CDKL3Q8IVW4 592 aaPredicted RBP9.94□□□□□ -0.82
TRIM55-201ENST00000276573 CCDC13Q8IYE1 715 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 CYP4X1Q8N118 509 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 SCML4Q8N228 414 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 SLC7A14Q8TBB6 771 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 URGCPQ8TCY9 931 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 PYROXD1Q8WU10 500 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 ZNF296Q8WUU4 475 aaPredicted RBP9.94□□□□□ -0.82
TRIM55-201ENST00000276573 ARHGEF2Q92974 986 aaKnown RBP9.94□□□□□ -0.82
TRIM55-201ENST00000276573 PGAP3Q96FM1 320 aaPredicted RBP9.94□□□□□ -0.82
TRIM55-201ENST00000276573 FTHL17Q9BXU8 183 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 RABEP2Q9H5N1 569 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 TMPRSS4Q9NRS4 437 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 DTLQ9NZJ0 730 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 KANSL3Q9P2N6 904 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 FBXW11Q9UKB1 542 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 PRDM4Q9UKN5 801 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 KBTBD13C9JR72 458 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 ENPP3O14638 875 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 CHADO15335 359 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 CDH16O75309 829 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 BANF1O75531 89 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 GCATO75600 419 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 F9P00740 461 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 COL6A1P12109 1028 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 NCAM1P13591 858 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 SELPP16109 830 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 SEC24CP53992 1094 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 AIF1P55008 147 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 GPX6P59796 221 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 TSPY1Q01534 308 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 CCDC38Q502W7 563 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 KCNT2Q6UVM3 1135 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 BZW1Q7L1Q6 419 aaKnown RBP9.94□□□□□ -0.82
TRIM55-201ENST00000276573 LRRC8DQ7L1W4 858 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 CTU1Q7Z7A3 348 aaKnown RBP9.94□□□□□ -0.82
TRIM55-201ENST00000276573 TDRPQ86YL5 185 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 COLGALT2Q8IYK4 626 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 PDIK1LQ8N165 341 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 RIBC1Q8N443 379 aaPredicted RBP9.94□□□□□ -0.82
TRIM55-201ENST00000276573 RNF139Q8WU17 664 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 LRRN4Q8WUT4 740 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 NTAN1Q96AB6 310 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 SELENOSQ9BQE4 189 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 SEZ6LQ9BYH1 1024 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 VPS37BQ9H9H4 285 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 WDR6Q9NNW5 1121 aaKnown RBP9.94□□□□□ -0.82
TRIM55-201ENST00000276573 DMAP1Q9NPF5 467 aaPredicted RBP9.94□□□□□ -0.82
TRIM55-201ENST00000276573 PPANQ9NQ55 473 aaKnown RBP9.94□□□□□ -0.82
TRIM55-201ENST00000276573 ARHGEF4Q9NR80 690 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 RAB6BQ9NRW1 208 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 EURLQ9NYK6 297 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 CTNNAL1Q9UBT7 734 aa9.94□□□□□ -0.82
TRIM55-201ENST00000276573 MFHAS1Q9Y4C4 1052 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms