RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 SERPINB5P36952 375 aa13.35□□□□□ -0.27
COL8A1-202ENST00000273342 ZNF699Q32M78 642 aa13.35□□□□□ -0.27
COL8A1-202ENST00000273342 MAVSQ7Z434 540 aa13.35□□□□□ -0.27
COL8A1-202ENST00000273342 ZNF70Q9UC06 446 aaPredicted RBP13.35□□□□□ -0.27
COL8A1-202ENST00000273342 SLC15A5A6NIM6 579 aa13.35□□□□□ -0.27
COL8A1-202ENST00000273342 PEX1O43933 1283 aa13.35□□□□□ -0.27
COL8A1-202ENST00000273342 STBD1O95210 358 aa13.35□□□□□ -0.27
COL8A1-202ENST00000273342 APOEP02649 317 aa13.35□□□□□ -0.27
COL8A1-202ENST00000273342 C1QAP02745 245 aa13.35□□□□□ -0.27
COL8A1-202ENST00000273342 FAM200BP0CF97 657 aa13.35□□□□□ -0.27
COL8A1-202ENST00000273342 ARRB2P32121 409 aa13.35□□□□□ -0.27
COL8A1-202ENST00000273342 RGS7P49802 495 aa13.35□□□□□ -0.27
COL8A1-202ENST00000273342 GTF2A2P52657 109 aa13.35□□□□□ -0.27
COL8A1-202ENST00000273342 CHN2P52757 468 aa13.35□□□□□ -0.27
COL8A1-202ENST00000273342 CLDN10P78369 228 aa13.35□□□□□ -0.27
COL8A1-202ENST00000273342 PDPK2PQ6A1A2 396 aa13.35□□□□□ -0.27
COL8A1-202ENST00000273342 SESTD1Q86VW0 696 aa13.35□□□□□ -0.27
COL8A1-202ENST00000273342 C10orf107Q8IVU9 208 aa13.35□□□□□ -0.27
COL8A1-202ENST00000273342 TRIM42Q8IWZ5 723 aa13.35□□□□□ -0.27
COL8A1-202ENST00000273342 PRPF18Q99633 342 aaKnown RBP13.35□□□□□ -0.27
COL8A1-202ENST00000273342 JPH1Q9HDC5 661 aaPredicted RBP13.35□□□□□ -0.27
COL8A1-202ENST00000273342 THAP1Q9NVV9 213 aa13.35□□□□□ -0.27
COL8A1-202ENST00000273342 DTNAQ9Y4J8 743 aa13.35□□□□□ -0.27
COL8A1-202ENST00000273342 A0A1B0GTW7 788 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 KLRG2A4D1S0 409 aaPredicted RBP13.34□□□□□ -0.27
COL8A1-202ENST00000273342 PEX10O60683 326 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 METTL18O95568 372 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 PABPC4LP0CB38 370 aaKnown RBP13.34□□□□□ -0.27
COL8A1-202ENST00000273342 ZNF132P52740 706 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 MRPS22P82650 360 aaKnown RBP13.34□□□□□ -0.27
COL8A1-202ENST00000273342 TMED1Q13445 227 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 USP13Q92995 863 aaPredicted RBP13.34□□□□□ -0.27
COL8A1-202ENST00000273342 TWNKQ96RR1 684 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 HAPLN3Q96S86 360 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 ADPGKQ9BRR6 497 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 NIF3L1Q9GZT8 377 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 UBAP1Q9NZ09 502 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 ADCY6O43306 1168 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 TRUB2O95900 331 aaKnown RBP13.34□□□□□ -0.27
COL8A1-202ENST00000273342 CLPTM1O96005 669 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 PSAPP07602 524 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 PGGT1BP53609 377 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 PKNOX1P55347 436 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 SESN2P58004 480 aaPredicted RBP13.34□□□□□ -0.27
COL8A1-202ENST00000273342 TGFB2P61812 414 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 ITGA9Q13797 1035 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 TEDDM1Q5T9Z0 273 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 NIPA1Q7RTP0 329 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 TMC7Q7Z402 723 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 TFB1MQ8WVM0 346 aaKnown RBP13.34□□□□□ -0.27
COL8A1-202ENST00000273342 GPAMQ9HCL2 828 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 LZTS1Q9Y250 596 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 PPME1Q9Y570 386 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 TPP1O14773 563 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 NDC80O14777 642 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 MAGEB3O15480 346 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 RGS20O76081 388 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 ITGA2BP08514 1039 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 ITGAXP20702 1163 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 POLR2BP30876 1174 aaKnown RBP13.34□□□□□ -0.27
COL8A1-202ENST00000273342 IDH3AP50213 366 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 BCAR1P56945 870 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 MYBPC3Q14896 1274 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 CNGA3Q16281 694 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 NADK2Q4G0N4 442 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 PABPC1LQ4VXU2 614 aaKnown RBP13.34□□□□□ -0.27
COL8A1-202ENST00000273342 OR6B2Q6IFH4 312 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 PTAR1Q7Z6K3 402 aaPredicted RBP13.34□□□□□ -0.27
COL8A1-202ENST00000273342 PRPF31Q8WWY3 499 aaKnown RBP13.34□□□□□ -0.27
COL8A1-202ENST00000273342 CLMNQ96JQ2 1002 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 C17orf75Q9HAS0 396 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 USP29Q9HBJ7 922 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 PSAT1Q9Y617 370 aa13.34□□□□□ -0.27
COL8A1-202ENST00000273342 MYO18AQ92614 2054 aaKnown RBP13.34□□□□□ -0.27
COL8A1-202ENST00000273342 WDR27A2RRH5 827 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 M0QYV0 167 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 SNNO75324 88 aaPredicted RBP13.33□□□□□ -0.28
COL8A1-202ENST00000273342 ASLP04424 464 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 PDGFRAP16234 1089 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 PTPN7P35236 360 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 ALDH1A3P47895 512 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 TUBB3Q13509 450 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 PDK1Q15118 436 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 NOMO1Q15155 1222 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 CA9Q16790 459 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 ANKRD20A4Q4UJ75 823 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 PPM1LQ5SGD2 360 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 C6orf52Q5T4I8 152 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 TRIM74Q86UV6 250 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 TRIM73Q86UV7 250 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 XYLT1Q86Y38 959 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 ATG4CQ96DT6 458 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 PPP1R16BQ96T49 567 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 COPS7BQ9H9Q2 264 aaPredicted RBP13.33□□□□□ -0.28
COL8A1-202ENST00000273342 LIN28AQ9H9Z2 209 aaKnown RBP13.33□□□□□ -0.28
COL8A1-202ENST00000273342 RNF146Q9NTX7 359 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 BTBD7Q9P203 1132 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 CNTN6Q9UQ52 1028 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 SCN9AQ15858 1988 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 LSM8O95777 96 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms